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BK061480.1__DBA08544.1__X__00072

Bact-Vir

BK061480.1__DBA08544.1__X__00072

Identity

Accession:
BK061480 ↗
Kingdom:
phage

Quality

88.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 2-151
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02899.24 best Phage_int_SAM_1 49.2 7.10e-13 56.7% 89.2%
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1a0pA01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.89 54.0 6.90e-01 82.0% 100.0%
3nrwA00 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.86 57.0 6.82e-01 84.7% 96.2%
3lysA00 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.82 52.0 6.21e-01 70.7% 91.4%
4a8eA01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.81 47.0 6.13e-01 81.3% 100.0%
2kkpA00 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.78 52.0 5.85e-01 80.0% 86.3%
2kd1A00 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.75 54.0 6.06e-01 80.0% 93.2%
1v4aA01 1.10.4050.10 Mainly Alpha › Orthogonal Bundle › Nucleotidyltransferase substrate binding subunit/domain fold › Glutamine synthase adenylyltransferase GlnE 0.58 39.0 4.46e-01 74.0% 93.6%
1zp2A02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.53 37.0 4.20e-01 72.7% 99.1%
2uy1A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 44.0 3.16e-01 93.3% 47.3%
3behB01 1.20.120.540 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels 0.50 29.0 3.26e-01 72.7% 72.6%
1yowA00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.50 38.0 3.31e-01 78.7% 83.5%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4140783 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.92 60.0 7.46e-01 84.7% 100.0%
4040148 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.92 60.0 7.46e-01 81.3% 100.0%
4566333 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.92 60.0 7.45e-01 80.7% 100.0%
4655797 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.91 57.0 7.25e-01 80.0% 100.0%
4520087 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.91 60.0 7.36e-01 84.7% 100.0%
4362692 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.91 60.0 7.38e-01 81.3% 100.0%
3969537 186.1.1.0 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.90 59.0 7.33e-01 81.3% 100.0%
4377812 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.90 59.0 7.31e-01 81.3% 100.0%
4097981 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.89 61.0 7.34e-01 84.0% 100.0%
4142699 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.88 58.0 7.15e-01 85.3% 100.0%
4318189 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.88 60.0 7.25e-01 85.3% 99.0%
3504160 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.88 60.0 7.10e-01 70.7% 95.5%
4102411 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.88 60.0 7.02e-01 75.3% 94.5%
4130034 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.87 60.0 7.05e-01 70.7% 95.5%
4473841 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.87 60.0 7.19e-01 88.7% 100.0%
4199344 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.87 60.0 6.94e-01 70.7% 97.4%
4579981 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.87 60.0 7.01e-01 71.3% 95.5%
4008705 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.86 60.0 6.86e-01 71.3% 92.2%
4160987 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.86 59.0 6.91e-01 70.7% 95.5%
4175280 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.86 59.0 7.08e-01 81.3% 100.0%
4063794 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.85 58.0 6.79e-01 70.7% 94.5%
4173849 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.85 59.0 6.87e-01 70.7% 95.5%
4965639 186.1.1.4 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 0.85 58.0 7.03e-01 80.0% 100.0%
4069480 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.85 61.0 7.13e-01 76.0% 100.0%
4406227 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.84 60.0 6.57e-01 72.0% 100.0%
4969225 186.1.1.4 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 0.84 60.0 7.03e-01 74.0% 99.1%
4965844 186.1.1.0 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.84 57.0 6.73e-01 74.0% 94.5%
4487415 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.84 61.0 6.97e-01 89.3% 96.5%
4220256 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.84 59.0 6.84e-01 74.7% 97.3%
4657272 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.83 56.0 6.62e-01 74.0% 97.1%
4629318 186.1.1.0 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.83 54.0 6.50e-01 80.7% 95.2%
4074907 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.82 56.0 6.61e-01 70.7% 94.5%
4465167 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.82 59.0 6.92e-01 84.7% 100.0%
4142845 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.82 59.0 6.47e-01 74.0% 88.0%
4044410 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.82 60.0 6.92e-01 76.0% 98.3%
4152050 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.81 78.0 7.53e-01 100.0% 92.7%
4406523 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.81 57.0 6.65e-01 74.0% 97.3%
4411945 186.1.1.0 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.81 50.0 6.12e-01 74.0% 94.0%
4051052 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.81 55.0 6.40e-01 70.7% 94.5%
3587238 186.1.1.3 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_5 0.80 51.0 6.04e-01 70.7% 91.4%
4962165 186.1.1.30 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › PF30198 0.79 58.0 6.31e-01 74.0% 96.0%
5082760 186.1.1.4 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 0.79 54.0 6.21e-01 87.3% 91.3%
136330 186.1.1.5 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 0.79 52.0 6.04e-01 80.0% 91.7%
5058076 186.1.1.0 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.77 56.0 6.25e-01 87.3% 93.3%
4932089 186.1.1.0 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.76 56.0 6.29e-01 87.3% 95.0%
4949701 186.1.1.4 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 0.76 57.0 6.41e-01 82.0% 96.7%
4458305 186.1.1.5 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 0.75 54.0 6.18e-01 74.7% 95.7%
4941150 186.1.1.0 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.75 56.0 6.23e-01 90.0% 95.8%
4988020 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.75 57.0 6.18e-01 88.0% 90.8%
5028305 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.75 55.0 6.12e-01 88.7% 94.2%
4681794 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.75 52.0 5.80e-01 70.7% 90.0%
4041098 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.74 64.0 6.63e-01 99.3% 97.1%
4964438 186.1.1.0 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.74 55.0 6.12e-01 87.3% 96.7%
3781031 186.1.1.0 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.73 50.0 5.69e-01 70.0% 92.2%
3587631 186.1.1.0 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.72 58.0 6.05e-01 84.0% 92.9%
4929008 186.1.1.0 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.68 56.0 5.77e-01 87.3% 91.4%
4964782 186.1.1.0 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.67 54.0 5.77e-01 90.7% 97.7%
3807144 601.4.1.0 alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains 0.55 33.0 3.94e-01 82.0% 90.0%
5078806 601.7.1.1 alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HepT-like 0.51 33.0 3.50e-01 78.0% 73.1%
D2 medium residues 162-305
PDB
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4a8eA02 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.87 73.0 6.72e-01 100.0% 69.8%
5jk0B01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.78 68.0 6.33e-01 97.9% 75.7%
2a3vA02 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.78 74.0 6.39e-01 100.0% 77.7%
3nkhA00 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.78 73.0 6.23e-01 100.0% 72.9%
1ae9A00 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.75 65.0 6.09e-01 99.3% 76.0%
1f44A01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.69 65.0 5.78e-01 100.0% 76.3%
2cufA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.56 28.0 3.75e-01 86.1% 91.7%
1hciA04 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.50 26.0 2.93e-01 74.3% 62.3%
ECOD (86)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4936284 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.89 69.0 7.76e-01 99.3% 100.0%
5010452 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.89 66.0 7.57e-01 96.5% 100.0%
5028332 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.89 73.0 7.87e-01 100.0% 98.4%
5030307 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.88 74.0 7.91e-01 100.0% 99.2%
5029991 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.88 72.0 7.68e-01 100.0% 96.8%
4043462 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.87 70.0 7.70e-01 96.5% 100.0%
3969115 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 62.0 7.20e-01 97.9% 100.0%
4071300 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 78.0 8.04e-01 98.6% 100.0%
4153666 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 75.0 7.75e-01 100.0% 97.0%
5080069 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 69.0 7.51e-01 95.8% 100.0%
4975762 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 71.0 7.61e-01 99.3% 98.4%
4966682 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 66.0 7.40e-01 95.8% 100.0%
4278298 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 75.0 7.76e-01 100.0% 97.0%
5016981 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 68.0 7.49e-01 100.0% 99.2%
4949702 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 65.0 7.13e-01 99.3% 94.2%
5054951 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 71.0 7.46e-01 98.6% 95.4%
5037644 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 66.0 7.23e-01 99.3% 96.7%
4120466 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 74.0 7.68e-01 100.0% 97.0%
5058465 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.84 67.0 7.19e-01 100.0% 94.4%
4357768 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.84 69.0 7.31e-01 99.3% 94.6%
3590354 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.84 75.0 7.79e-01 100.0% 100.0%
5072041 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.84 71.0 7.45e-01 100.0% 96.9%
3958910 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.83 75.0 7.66e-01 100.0% 97.1%
4247514 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.83 71.0 7.41e-01 99.3% 95.6%
4312876 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.83 72.0 7.59e-01 97.2% 100.0%
4979786 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.83 66.0 7.23e-01 100.0% 99.2%
4095013 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.83 73.0 7.60e-01 100.0% 99.3%
4181053 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.83 77.0 6.78e-01 100.0% 70.5%
5059725 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.83 68.0 6.23e-01 99.3% 68.3%
3942169 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.82 68.0 7.29e-01 99.3% 99.2%
5035582 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.82 63.0 7.07e-01 98.6% 100.0%
4961917 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.82 69.0 6.24e-01 98.6% 66.8%
4940211 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.82 70.0 6.61e-01 100.0% 75.9%
5003452 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.82 71.0 7.43e-01 97.9% 100.0%
4933965 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.81 67.0 7.20e-01 98.6% 99.2%
5057283 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.81 70.0 7.29e-01 100.0% 96.3%
4964228 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.81 71.0 7.31e-01 100.0% 96.3%
5041911 101.1.8.8 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integr_3 0.81 59.0 5.61e-01 100.0% 64.8%
4932090 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.81 67.0 7.22e-01 98.6% 100.0%
5002702 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.81 70.0 6.32e-01 100.0% 68.9%
4966027 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.81 68.0 6.18e-01 100.0% 68.5%
2319285 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.80 62.0 6.84e-01 99.3% 99.1%
4004713 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.80 66.0 6.86e-01 100.0% 91.9%
4118349 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.80 68.0 7.10e-01 100.0% 94.8%
4959579 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.80 71.0 7.38e-01 98.6% 99.3%
3984925 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.80 68.0 7.13e-01 98.6% 97.7%
5030401 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.80 70.0 7.24e-01 100.0% 97.0%
4969226 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.80 71.0 7.31e-01 97.9% 98.5%
4940128 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.80 67.0 7.17e-01 95.8% 100.0%
4134015 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.80 75.0 7.31e-01 98.6% 100.0%
4180367 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.80 76.0 7.20e-01 100.0% 96.4%
4981966 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.80 72.0 6.38e-01 100.0% 68.5%
4961948 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.80 64.0 7.02e-01 96.5% 100.0%
4253165 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.80 70.0 7.15e-01 99.3% 95.0%
4947440 101.1.8.26 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Ribosomal_L32p 0.79 66.0 6.85e-01 98.6% 92.6%
4274013 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.79 73.0 7.24e-01 98.6% 100.0%
3839627 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.79 70.0 7.23e-01 100.0% 100.0%
4446668 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.79 71.0 7.26e-01 95.1% 100.0%
5061203 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.79 68.0 6.15e-01 100.0% 68.9%
3589594 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.79 74.0 7.24e-01 100.0% 96.8%
4960057 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.79 70.0 7.18e-01 98.6% 97.1%
5033298 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.78 74.0 7.20e-01 99.3% 99.4%
5083074 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.78 73.0 7.25e-01 99.3% 96.7%
4522024 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.78 73.0 7.20e-01 98.6% 100.0%
5081700 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.78 74.0 7.04e-01 100.0% 95.8%
3589779 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.78 74.0 7.28e-01 99.3% 100.0%
1267972 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.78 71.0 6.90e-01 96.5% 100.0%
184514 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.78 72.0 6.95e-01 97.2% 100.0%
3289618 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.78 72.0 7.00e-01 97.9% 100.0%
4313957 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.77 69.0 7.18e-01 97.2% 100.0%
5011490 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.77 73.0 7.19e-01 100.0% 95.3%
3587374 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.77 73.0 6.92e-01 100.0% 99.4%
4231677 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.77 72.0 7.23e-01 98.6% 98.6%
4998614 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.77 72.0 6.22e-01 98.6% 74.8%
4997941 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.76 72.0 6.24e-01 100.0% 71.0%
4034079 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.76 66.0 6.84e-01 98.6% 96.3%
3954716 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.76 70.0 7.09e-01 100.0% 99.3%
4137254 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.76 71.0 6.95e-01 100.0% 99.4%
4938177 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.75 71.0 7.16e-01 100.0% 100.0%
3942380 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.74 71.0 6.68e-01 100.0% 90.5%
3741694 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.73 67.0 5.55e-01 98.6% 71.6%
4999472 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.73 64.0 5.82e-01 95.8% 70.5%
4961786 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.73 69.0 6.80e-01 100.0% 98.7%
4934137 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.72 69.0 6.69e-01 100.0% 98.1%
3926774 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.69 62.0 6.32e-01 95.8% 100.0%
4928148 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.67 52.0 4.95e-01 95.8% 69.6%
D3 medium residues 306-376
PDB
Domain cluster: representative
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2rn7A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 54.0 5.61e-01 74.6% 78.8%
2zcxA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.73 63.0 4.60e-01 98.6% 67.8%
3c07B00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.70 62.0 4.45e-01 100.0% 89.7%
3lwjA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.67 59.0 4.36e-01 100.0% 96.9%
2yveB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.67 58.0 4.37e-01 97.2% 75.6%
2qwtA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.67 56.0 4.27e-01 93.0% 85.0%
1jhfA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 47.0 4.78e-01 74.6% 95.7%
1ignB02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 48.0 4.44e-01 77.5% 83.7%
2oi8A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.66 56.0 4.17e-01 100.0% 74.4%
2yxlA01 1.10.940.10 Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like 0.65 54.0 4.28e-01 94.4% 91.4%
3vuqB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.65 57.0 4.30e-01 100.0% 97.7%
3anpB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.63 52.0 3.90e-01 94.4% 96.4%
1on2A02 1.10.60.10 Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Iron dependent repressor, metal binding and dimerisation domain 0.51 33.0 3.56e-01 70.4% 76.2%
5djsA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 41.0 3.28e-01 88.7% 74.8%
4wnfA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.50 42.0 2.88e-01 93.0% 49.8%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5033577 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.91 62.0 7.33e-01 71.8% 100.0%
4400327 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.84 59.0 5.43e-01 83.1% 57.8%
3602804 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.80 52.0 6.03e-01 78.9% 94.0%
4390290 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.78 56.0 5.82e-01 74.6% 84.6%
3672635 101.1.1.295 alpha arrays › HTH › HTH › Three-helical HTH › HTH_70 0.78 58.0 5.72e-01 78.9% 77.3%
4944795 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 50.0 5.23e-01 71.8% 89.2%
167874 101.1.1.5 alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.71 51.0 5.29e-01 76.1% 93.8%
386667 101.1.1.5 alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.70 56.0 5.31e-01 85.9% 81.0%
3974144 101.1.1.5 alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.70 55.0 5.45e-01 85.9% 89.3%
3696840 101.1.2.384 alpha arrays › HTH › HTH › winged helix domain › Myb_DNA-bind_8 0.69 48.0 5.37e-01 73.2% 100.0%
3239718 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 50.0 5.23e-01 77.5% 86.2%
3277911 101.1.1.5 alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.69 54.0 5.69e-01 84.5% 100.0%
4968085 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 46.0 4.76e-01 70.4% 75.4%
3098678 101.1.1.5 alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.69 53.0 5.34e-01 83.1% 91.5%
386744 101.1.1.5 alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.68 54.0 5.28e-01 85.9% 87.0%
1247873 101.1.1.5 alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.68 51.0 5.02e-01 80.3% 83.1%
4262267 101.1.1.5 alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.68 54.0 5.46e-01 85.9% 95.7%
2545 101.1.1.5 alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.67 52.0 5.07e-01 85.9% 86.1%
3689715 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.67 49.0 5.20e-01 81.7% 93.3%
5022243 195.1.1.1 alpha complex topology › NusB-like › NusB-like › NusB-like › NusB 0.65 52.0 4.19e-01 88.7% 97.2%
4258132 101.1.2.27 alpha arrays › HTH › HTH › winged helix domain › LexA_DNA_bind 0.64 48.0 4.39e-01 80.3% 75.8%
5013300 101.1.2.652 alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C 0.64 45.0 3.63e-01 74.6% 46.2%
3191621 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.64 44.0 4.86e-01 73.2% 96.4%
4339388 101.1.2.27 alpha arrays › HTH › HTH › winged helix domain › LexA_DNA_bind 0.63 45.0 4.71e-01 76.1% 100.0%
3734764 101.1.2.251 alpha arrays › HTH › HTH › winged helix domain › DUF6581 0.63 55.0 3.63e-01 100.0% 87.4%
4949917 101.1.1.5 alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.63 48.0 4.78e-01 84.5% 90.7%
4947701 101.1.2.882 alpha arrays › HTH › HTH › winged helix domain › FeoA 0.61 49.0 4.46e-01 91.5% 98.0%
3640032 101.1.3.9 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Myb_DNA-bind_8 0.60 43.0 4.69e-01 76.1% 98.2%
4230066 101.1.2.27 alpha arrays › HTH › HTH › winged helix domain › LexA_DNA_bind 0.60 49.0 4.56e-01 90.1% 93.3%
5027248 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.50 39.0 2.65e-01 90.1% 53.4%