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BML_08012017_9_75m_scaffold_2_prodigal-single.1__X__X__00035
Bact-VirBML_08012017_9_75m_scaffold_2_prodigal-single.1__X__X__00035
Identity
- Kingdom:
- phage
Quality
59.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 175-238
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kbgA03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 52.0 | 5.50e-01 | 76.6% | 94.6% |
| 1y71A00 | 2.30.30.430 | Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain | 0.67 | 54.0 | 4.45e-01 | 85.9% | 60.6% |
| 4c5eC02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 48.0 | 4.29e-01 | 100.0% | 77.1% |
| 2m9uA00 | 2.30.30.850 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 51.0 | 4.57e-01 | 100.0% | 71.9% |
| 3n77A00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.51 | 42.0 | 3.41e-01 | 98.4% | 90.8% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3721794 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 56.0 | 5.83e-01 | 81.2% | 90.0% |
| None | — | 0.70 | 52.0 | 2.81e-01 | 81.2% | 5.6% | |
| 3677829 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.68 | 58.0 | 4.98e-01 | 100.0% | 75.5% |
| 5011007 | 4.1.1.301 ↗ | beta barrels › SH3 › SH3 › SH3 › MJ1316 | 0.66 | 45.0 | 4.31e-01 | 70.3% | 68.9% |
| 3174977 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.66 | 60.0 | 5.23e-01 | 100.0% | 85.3% |
| 3443078 | 4.1.1.330 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O, SH3-C_UBE2O | 0.63 | 58.0 | 4.13e-01 | 100.0% | 52.6% |
| 3785385 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 57.0 | 5.08e-01 | 100.0% | 80.0% |
| 5064407 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.61 | 45.0 | 3.03e-01 | 79.7% | 20.1% |
| 4420340 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 46.0 | 4.79e-01 | 82.8% | 91.7% |
| 4061621 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 48.0 | 3.38e-01 | 95.3% | 29.2% |
| 5035742 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 45.0 | 4.70e-01 | 95.3% | 90.0% |
| 4929306 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.57 | 39.0 | 2.44e-01 | 71.9% | 96.4% |
| 4957143 | 101.21.1.1 ↗ | alpha arrays › HTH › HTH domain in DNA topoisomerase IV alpha subunit › HTH domain in DNA topoisomerase IV alpha subunit › TP6A_N | 0.52 | 37.0 | 3.07e-01 | 79.7% | 91.1% |
D2
high
residues 259-319
Domain cluster:
representative
CATH (77)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3cm1A00 | 2.30.31.20 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB | 0.72 | 62.0 | 4.74e-01 | 95.1% | 66.2% |
| 3bexA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.71 | 54.0 | 4.16e-01 | 85.2% | 36.8% |
| 1lf7A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.70 | 54.0 | 3.91e-01 | 82.0% | 54.9% |
| 1tkkA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.69 | 56.0 | 4.58e-01 | 90.2% | 95.7% |
| 1gqyB02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.69 | 57.0 | 3.92e-01 | 98.4% | 26.3% |
| 1z47A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 48.0 | 5.20e-01 | 85.2% | 91.8% |
| 1bqgA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.68 | 55.0 | 4.27e-01 | 90.2% | 76.1% |
| 2a9sB00 | 3.90.950.20 | Alpha Beta › Alpha-Beta Complex › Maf protein › CinA-like | 0.68 | 57.0 | 4.28e-01 | 98.4% | 83.0% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.67 | 56.0 | 4.31e-01 | 93.4% | 80.7% |
| 3go2A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.67 | 52.0 | 4.40e-01 | 90.2% | 84.2% |
| 4dokA01 | 3.50.70.10 | Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › | 0.66 | 47.0 | 3.54e-01 | 75.4% | 63.2% |
| 1bqnA05 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.66 | 50.0 | 3.98e-01 | 90.2% | 38.9% |
| 2qddA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.66 | 53.0 | 4.21e-01 | 90.2% | 85.4% |
| 3i6eA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.66 | 52.0 | 4.50e-01 | 90.2% | 93.2% |
| 1ykdB02 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.66 | 58.0 | 4.12e-01 | 100.0% | 65.8% |
| 4dxkA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.66 | 51.0 | 4.19e-01 | 90.2% | 76.0% |
| 1rl2A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 43.0 | 4.46e-01 | 82.0% | 73.2% |
| 3cetB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.66 | 46.0 | 3.79e-01 | 73.8% | 41.8% |
| 4jn7A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.65 | 51.0 | 4.24e-01 | 90.2% | 80.7% |
| 1v3eA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.65 | 54.0 | 3.28e-01 | 95.1% | 31.3% |
| 1gutA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.65 | 48.0 | 4.69e-01 | 86.9% | 73.1% |
| 3kyeA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.64 | 56.0 | 4.53e-01 | 98.4% | 50.4% |
| 5yjwA00 | 3.50.50.100 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › | 0.64 | 45.0 | 2.72e-01 | 75.4% | 34.6% |
| 2pgwA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.63 | 50.0 | 3.85e-01 | 90.2% | 48.0% |
| 1ei5A01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.62 | 52.0 | 3.31e-01 | 93.4% | 17.8% |
| 2o62A01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.62 | 48.0 | 3.86e-01 | 86.9% | 62.6% |
| 1nqnA00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.62 | 53.0 | 4.40e-01 | 100.0% | 87.3% |
| 2db2A01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.62 | 53.0 | 4.64e-01 | 96.7% | 76.6% |
| 2jzkA00 | 2.30.60.10 | Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N | 0.62 | 51.0 | 4.38e-01 | 93.4% | 94.2% |
| 3dzmB00 | 2.40.160.70 | Mainly Beta › Beta Barrel › Porin › outer membrane protein from Thermus thermophilus HB27. | 0.62 | 52.0 | 3.68e-01 | 96.7% | 89.7% |
| 5umsA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.62 | 46.0 | 3.91e-01 | 82.0% | 48.0% |
| 3l8kA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.62 | 47.0 | 3.72e-01 | 80.3% | 96.8% |
| 3gd6A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.62 | 48.0 | 3.80e-01 | 90.2% | 71.1% |
| 7c38B01 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.62 | 49.0 | 3.15e-01 | 90.2% | 26.3% |
| 1tg0A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 45.0 | 4.45e-01 | 80.3% | 86.4% |
| 2wweA01 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.60 | 47.0 | 4.03e-01 | 86.9% | 96.2% |
| 2xg5A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 46.0 | 4.06e-01 | 83.6% | 79.3% |
| 1inyA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.60 | 47.0 | 2.94e-01 | 88.5% | 27.1% |
| 2czoA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.60 | 47.0 | 3.80e-01 | 88.5% | 90.8% |
| 7ct3A01 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.60 | 49.0 | 4.05e-01 | 98.4% | 48.7% |
| 3nixB00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.60 | 46.0 | 2.84e-01 | 85.2% | 57.2% |
| 4tyzA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 42.0 | 3.50e-01 | 78.7% | 41.3% |
| 1lomA00 | 2.30.60.10 | Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N | 0.60 | 41.0 | 3.57e-01 | 73.8% | 49.5% |
| 6aqgA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 47.0 | 3.62e-01 | 86.9% | 73.8% |
| 2eigA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 44.0 | 3.06e-01 | 82.0% | 62.2% |
| 5jk0B01 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.59 | 51.0 | 3.68e-01 | 95.1% | 72.3% |
| 4dkkA02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.59 | 48.0 | 4.59e-01 | 96.7% | 89.2% |
| 5ncsA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.59 | 51.0 | 3.90e-01 | 96.7% | 75.5% |
| 5tkyA04 | 2.60.34.10 | Mainly Beta › Sandwich › Substrate Binding Domain Of DNAk; Chain A, domain 1 › Substrate Binding Domain Of DNAk; Chain A, domain 1 | 0.59 | 46.0 | 3.68e-01 | 83.6% | 74.1% |
| 2gnxA02 | 3.30.450.240 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.59 | 49.0 | 4.18e-01 | 100.0% | 55.0% |
| 3d30A02 | 2.60.40.760 | Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain | 0.58 | 47.0 | 4.12e-01 | 90.2% | 71.3% |
| 2y1sA00 | 2.30.60.10 | Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N | 0.58 | 48.0 | 4.07e-01 | 95.1% | 94.4% |
| 1hp7A01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.58 | 44.0 | 3.84e-01 | 82.0% | 71.6% |
| 2oz8A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.58 | 44.0 | 3.67e-01 | 90.2% | 56.6% |
| 3n40P02 | 2.60.40.3200 | Mainly Beta › Sandwich › Immunoglobulin-like › Alphavirus E2 glycoprotein, A domain | 0.58 | 49.0 | 3.38e-01 | 96.7% | 46.5% |
| 1u9tA02 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.58 | 42.0 | 3.20e-01 | 82.0% | 58.6% |
| 1f0cA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.58 | 47.0 | 3.88e-01 | 93.4% | 70.3% |
| 3jcuO01 | 2.40.160.30 | Mainly Beta › Beta Barrel › Porin › Photosystem II, cytochrome c-550 precursor | 0.58 | 49.0 | 3.62e-01 | 100.0% | 86.4% |
| 1ospO02 | 3.90.930.1 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.57 | 45.0 | 3.46e-01 | 86.9% | 50.0% |
| 4gyiA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 40.0 | 3.55e-01 | 77.0% | 93.9% |
| 1iowA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.57 | 41.0 | 3.23e-01 | 80.3% | 57.0% |
| 4r9iA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.56 | 45.0 | 3.86e-01 | 90.2% | 96.0% |
| 5t5lA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 42.0 | 2.98e-01 | 86.9% | 64.2% |
| 6gbuD00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 43.0 | 4.29e-01 | 85.2% | 89.1% |
| 4egvA02 | 2.40.50.840 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 42.0 | 4.02e-01 | 86.9% | 74.7% |
| 8axiA01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.55 | 46.0 | 2.91e-01 | 96.7% | 29.1% |
| 1reoA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 45.0 | 3.53e-01 | 100.0% | 96.6% |
| 6ro0F00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 41.0 | 3.68e-01 | 90.2% | 90.8% |
| 2qpvA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 45.0 | 3.50e-01 | 95.1% | 53.8% |
| 3oulA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.53 | 41.0 | 2.91e-01 | 88.5% | 27.5% |
| 1zo0A00 | 3.40.630.60 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › | 0.52 | 45.0 | 3.62e-01 | 100.0% | 77.0% |
| 4fpwB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 46.0 | 3.41e-01 | 100.0% | 59.0% |
| 2l3bA00 | 2.60.40.2410 | Mainly Beta › Sandwich › Immunoglobulin-like › Uncharacterised protein PF12988, DUF3872 | 0.52 | 41.0 | 3.29e-01 | 90.2% | 70.8% |
| 2x5gA00 | 3.30.720.60 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.51 | 44.0 | 3.88e-01 | 96.7% | 93.4% |
| 3dorA02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.51 | 40.0 | 3.46e-01 | 90.2% | 92.5% |
| 4ozxA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 41.0 | 2.81e-01 | 100.0% | 37.2% |
| 7snsB01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 42.0 | 3.18e-01 | 96.7% | 38.9% |
ECOD (91)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3164555 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.81 | 60.0 | 4.42e-01 | 88.5% | 32.0% |
| 4609775 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.79 | 65.0 | 5.61e-01 | 90.2% | 95.8% |
| 4201328 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.76 | 62.0 | 5.36e-01 | 90.2% | 95.8% |
| 4268846 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.76 | 61.0 | 5.18e-01 | 88.5% | 99.0% |
| 1877618 | 330.15.1.1 ↗ | a+b two layers › dsRBD-like › VtrA protein periplasmic domain › VtrA protein periplasmic domain › VtrA_C | 0.75 | 65.0 | 5.67e-01 | 95.1% | 93.3% |
| 4255589 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.75 | 62.0 | 5.22e-01 | 90.2% | 96.0% |
| 3397928 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.75 | 52.0 | 4.04e-01 | 72.1% | 98.4% |
| 3574409 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.74 | 57.0 | 5.04e-01 | 83.6% | 57.8% |
| 4355046 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.74 | 61.0 | 5.24e-01 | 90.2% | 98.9% |
| 3707477 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.74 | 50.0 | 3.00e-01 | 70.5% | 98.5% |
| 4297175 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.74 | 59.0 | 5.26e-01 | 90.2% | 97.8% |
| 3237475 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.73 | 57.0 | 5.28e-01 | 88.5% | 66.7% |
| 3705320 | 223.2.1.42 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Synaptobrevin | 0.73 | 54.0 | 4.00e-01 | 88.5% | 30.6% |
| 4353121 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.73 | 59.0 | 5.04e-01 | 90.2% | 98.0% |
| 4058734 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.73 | 58.0 | 5.06e-01 | 88.5% | 96.8% |
| 5068175 | 2484.1.1.49 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hydant_A_N | 0.73 | 56.0 | 4.43e-01 | 90.2% | 40.0% |
| 4069377 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.73 | 58.0 | 5.04e-01 | 88.5% | 98.9% |
| 4354219 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.72 | 58.0 | 5.00e-01 | 90.2% | 97.0% |
| 3871253 | 220.1.1.122 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › C2_SHIP1-2_first | 0.72 | 56.0 | 4.33e-01 | 85.2% | 58.6% |
| 4059525 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.72 | 59.0 | 5.09e-01 | 90.2% | 92.6% |
| 3458155 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.72 | 56.0 | 3.54e-01 | 83.6% | 26.6% |
| 4997112 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.72 | 57.0 | 4.47e-01 | 98.4% | 40.8% |
| 4134592 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.72 | 57.0 | 4.93e-01 | 90.2% | 97.0% |
| 3177260 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.71 | 49.0 | 3.29e-01 | 82.0% | 18.7% |
| 4320111 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.71 | 58.0 | 4.94e-01 | 90.2% | 93.0% |
| 3924597 | 330.16.1.0 ↗ | a+b two layers › dsRBD-like › ODA16 N-terminal domain › ODA16 N-terminal domain | 0.71 | 56.0 | 5.36e-01 | 88.5% | 74.3% |
| 4087213 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.71 | 62.0 | 5.83e-01 | 98.4% | 89.3% |
| 4275948 | 220.1.1.52 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SNX17_FERM_C | 0.71 | 55.0 | 4.44e-01 | 85.2% | 69.2% |
| 4797890 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.70 | 48.0 | 4.35e-01 | 82.0% | 51.8% |
| 3338026 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.70 | 56.0 | 5.16e-01 | 90.2% | 67.5% |
| 3936442 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.70 | 56.0 | 4.74e-01 | 86.9% | 74.0% |
| 4211209 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.70 | 50.0 | 4.91e-01 | 85.2% | 70.8% |
| 4028996 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.69 | 49.0 | 3.72e-01 | 75.4% | 36.6% |
| 3517323 | 3131.1.1.2 ↗ | a+b two layers › FYR domain › FYR domain › FYR domain › FYRN | 0.69 | 53.0 | 4.37e-01 | 83.6% | 62.7% |
| 3626321 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.68 | 47.0 | 4.90e-01 | 72.1% | 83.6% |
| 163341 | 218.1.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N | 0.67 | 52.0 | 4.41e-01 | 90.2% | 94.6% |
| 3969569 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.67 | 48.0 | 4.87e-01 | 86.9% | 76.7% |
| 3492441 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.67 | 57.0 | 5.37e-01 | 96.7% | 89.3% |
| 3619467 | 220.1.1.84 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_15 | 0.67 | 48.0 | 3.98e-01 | 80.3% | 42.7% |
| 3725498 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 53.0 | 5.12e-01 | 88.5% | 90.0% |
| 3928430 | 4.1.1.223 ↗ | beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st | 0.66 | 50.0 | 4.83e-01 | 82.0% | 74.3% |
| 3575385 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.66 | 47.0 | 4.03e-01 | 75.4% | 69.0% |
| 3307236 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.66 | 52.0 | 4.29e-01 | 90.2% | 50.0% |
| 3971108 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.66 | 50.0 | 4.44e-01 | 90.2% | 56.7% |
| 3890928 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.66 | 54.0 | 3.92e-01 | 93.4% | 77.8% |
| 3636503 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.65 | 52.0 | 5.02e-01 | 88.5% | 88.6% |
| 4988423 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.65 | 53.0 | 4.87e-01 | 91.8% | 75.0% |
| 4385005 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.65 | 48.0 | 4.23e-01 | 82.0% | 94.7% |
| 3427602 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.64 | 51.0 | 3.26e-01 | 88.5% | 24.4% |
| 3507420 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 47.0 | 4.11e-01 | 78.7% | 86.3% |
| 3989857 | 706.2.1.0 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G | 0.64 | 52.0 | 3.99e-01 | 90.2% | 62.9% |
| 3313644 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.64 | 50.0 | 4.30e-01 | 90.2% | 57.1% |
| 3719687 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.64 | 45.0 | 4.24e-01 | 75.4% | 68.0% |
| 4964413 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.63 | 55.0 | 3.68e-01 | 98.4% | 29.8% |
| 3705072 | 719.1.1.0 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain | 0.63 | 53.0 | 4.40e-01 | 96.7% | 92.2% |
| 4033192 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 51.0 | 4.03e-01 | 90.2% | 83.1% |
| 3970949 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.63 | 45.0 | 3.66e-01 | 88.5% | 40.0% |
| 3605378 | 719.1.1.0 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain | 0.63 | 52.0 | 4.41e-01 | 96.7% | 94.5% |
| 3228053 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.63 | 47.0 | 4.89e-01 | 78.7% | 100.0% |
| 4077485 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.63 | 46.0 | 4.52e-01 | 78.7% | 84.6% |
| 3216442 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.63 | 49.0 | 3.42e-01 | 86.9% | 28.1% |
| 853 | 9.1.1.23 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF3598_N | 0.62 | 48.0 | 3.86e-01 | 86.9% | 62.1% |
| 3364063 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.62 | 52.0 | 4.06e-01 | 95.1% | 73.6% |
| 3715091 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.62 | 43.0 | 4.29e-01 | 73.8% | 69.2% |
| 1141950 | 3449.1.1.1 ↗ | a+b two layers › Cpn0803 › Cpn0803 › Cpn0803 › CT_584-like | 0.62 | 43.0 | 3.14e-01 | 77.0% | 25.7% |
| 3480200 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.62 | 46.0 | 4.33e-01 | 80.3% | 93.3% |
| 3583296 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.61 | 46.0 | 4.41e-01 | 80.3% | 84.3% |
| 3787441 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.61 | 45.0 | 4.00e-01 | 80.3% | 63.3% |
| 3255575 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.61 | 49.0 | 3.17e-01 | 91.8% | 27.8% |
| 3941411 | 223.1.1.3 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF | 0.61 | 50.0 | 3.64e-01 | 91.8% | 50.0% |
| 3623785 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.60 | 45.0 | 4.21e-01 | 80.3% | 76.0% |
| 3627778 | 220.1.1.64 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C1_MyoVII | 0.60 | 41.0 | 3.53e-01 | 78.7% | 44.0% |
| 4999507 | 330.7.1.2 ↗ | a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin | 0.60 | 46.0 | 4.48e-01 | 95.1% | 75.7% |
| 3704328 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.60 | 47.0 | 4.25e-01 | 86.9% | 62.7% |
| 5018537 | 5090.1.1.0 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains | 0.60 | 49.0 | 4.22e-01 | 93.4% | 86.0% |
| 3942573 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 44.0 | 4.56e-01 | 82.0% | 84.5% |
| 3440964 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.59 | 49.0 | 3.16e-01 | 96.7% | 28.6% |
| 3501861 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.59 | 48.0 | 4.19e-01 | 96.7% | 62.9% |
| 3942181 | 6150.1.1.0 ↗ | a+b two layers › hypotheical protein Lreu_0056 › hypotheical protein Lreu_0056 › hypotheical protein Lreu_0056 | 0.59 | 47.0 | 3.99e-01 | 88.5% | 91.4% |
| 3989850 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 50.0 | 4.33e-01 | 98.4% | 98.0% |
| 4891173 | 206.1.1.8 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PI3_PI4_kinase,FATC | 0.58 | 47.0 | 3.09e-01 | 88.5% | 46.9% |
| 2859147 | 7091.1.1.1 ↗ | a+b complex topology › C-terminal domain of DNA repair helicase RadD › C-terminal domain of DNA repair helicase RadD › C-terminal domain of DNA repair helicase RadD › PF29401 | 0.58 | 46.0 | 3.58e-01 | 90.2% | 62.7% |
| 3963148 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.58 | 46.0 | 3.97e-01 | 88.5% | 67.0% |
| 3547439 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.57 | 46.0 | 3.03e-01 | 88.5% | 26.8% |
| 396 | 2.2.1.8 ↗ | beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins › Pertus-S5-tox | 0.56 | 44.0 | 3.89e-01 | 90.2% | 90.8% |
| 4218488 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.55 | 41.0 | 3.78e-01 | 80.3% | 71.2% |
| 3482680 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 42.0 | 4.12e-01 | 82.0% | 87.7% |
| 3477607 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.54 | 46.0 | 2.58e-01 | 96.7% | 26.6% |
| 4280539 | 109.21.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › WD40 | 0.53 | 41.0 | 2.36e-01 | 90.2% | 9.8% |
| 5054384 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.53 | 44.0 | 4.28e-01 | 96.7% | 85.7% |
| 3282845 | 304.8.1.26 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF3145 | 0.53 | 46.0 | 3.51e-01 | 100.0% | 94.0% |
D3
high
residues 414-468
Domain cluster:
representative
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3e3vA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 64.0 | 6.40e-01 | 100.0% | 94.6% |
| 1ojlA03 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.73 | 52.0 | 5.55e-01 | 98.2% | 87.2% |
| 2e9xA01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 48.0 | 3.67e-01 | 100.0% | 31.2% |
| 3mhsB00 | 1.10.246.140 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › ENY2/SUS1 | 0.69 | 50.0 | 4.26e-01 | 78.2% | 50.5% |
| 3s64A00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.68 | 57.0 | 5.12e-01 | 100.0% | 71.6% |
| 4hehA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.66 | 55.0 | 4.88e-01 | 96.4% | 72.3% |
| 4esjA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 56.0 | 4.86e-01 | 100.0% | 65.6% |
| 1s8nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 44.0 | 4.38e-01 | 70.9% | 75.9% |
| 6wshA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 45.0 | 4.56e-01 | 78.2% | 76.4% |
| 2odmA00 | 1.10.287.750 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › SO2669-like | 0.64 | 53.0 | 4.76e-01 | 94.5% | 83.5% |
| 1f45B00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.63 | 46.0 | 3.49e-01 | 78.2% | 54.9% |
| 3r84A00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.63 | 42.0 | 3.67e-01 | 92.7% | 46.9% |
| 6dcjA02 | 1.25.40.650 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.61 | 52.0 | 4.34e-01 | 100.0% | 76.9% |
| 1toaA01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.61 | 45.0 | 3.46e-01 | 83.6% | 91.6% |
| 2nn4A00 | 1.10.287.760 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like | 0.61 | 50.0 | 4.87e-01 | 94.5% | 95.2% |
| 1qo0D02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 41.0 | 4.34e-01 | 80.0% | 84.8% |
| 2x1dA02 | 1.10.10.2120 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.60 | 49.0 | 4.51e-01 | 92.7% | 82.4% |
| 6ynwH01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.60 | 45.0 | 4.09e-01 | 83.6% | 59.5% |
| 1yozA00 | 1.10.3200.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › AF0941-like | 0.60 | 52.0 | 4.19e-01 | 100.0% | 61.9% |
| 3f7cA00 | 1.20.1590.10 | Mainly Alpha › Up-down Bundle › YP_001051499.1 fold like › YP_001051499.1 domain like | 0.60 | 44.0 | 3.02e-01 | 78.2% | 22.1% |
| 2l6jA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.60 | 45.0 | 3.69e-01 | 89.1% | 42.3% |
| 2wgmA01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.59 | 43.0 | 3.84e-01 | 83.6% | 53.7% |
| 2gscC00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.59 | 49.0 | 3.95e-01 | 94.5% | 79.1% |
| 5dn6J00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.58 | 42.0 | 3.85e-01 | 78.2% | 62.2% |
| 3e7pA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 45.0 | 3.01e-01 | 92.7% | 89.7% |
| 4ielA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.57 | 45.0 | 3.69e-01 | 94.5% | 69.8% |
| 3a98A02 | 1.20.1270.350 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Dedicator of cytokinesis N-terminal subdomain | 0.56 | 41.0 | 3.54e-01 | 83.6% | 49.4% |
| 3ehfD01 | 1.20.5.1930 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.56 | 40.0 | 3.88e-01 | 83.6% | 66.7% |
| 1yxrA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.56 | 42.0 | 3.89e-01 | 83.6% | 82.4% |
| 4gywA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.56 | 41.0 | 3.32e-01 | 80.0% | 69.4% |
| 1wp7A00 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.56 | 39.0 | 3.80e-01 | 90.9% | 65.6% |
| 3ph0C00 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.55 | 40.0 | 4.08e-01 | 89.1% | 81.1% |
| 1x4tA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.54 | 41.0 | 4.06e-01 | 90.9% | 77.6% |
| 1f5qB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.53 | 44.0 | 3.37e-01 | 94.5% | 71.0% |
| 1d9cA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.53 | 44.0 | 3.51e-01 | 100.0% | 45.5% |
| 1nafA02 | 1.20.58.160 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 45.0 | 3.97e-01 | 100.0% | 83.5% |
| 1urfA00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.52 | 36.0 | 3.24e-01 | 98.2% | 50.6% |
| 4it4A02 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.52 | 45.0 | 3.87e-01 | 100.0% | 73.6% |
| 4v1gA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.52 | 41.0 | 3.65e-01 | 90.9% | 69.4% |
| 1hp8A00 | 1.10.287.1130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › CytochromE C oxidase copper chaperone | 0.51 | 39.0 | 3.76e-01 | 94.5% | 86.8% |
| 1t72A02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.51 | 40.0 | 3.49e-01 | 96.4% | 84.7% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3673670 | 639.2.1.4 ↗ | alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) › Ovate | 0.75 | 63.0 | 6.07e-01 | 98.2% | 83.1% |
| 3825757 | 101.35.1.23 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › Ovate | 0.74 | 63.0 | 6.08e-01 | 100.0% | 84.6% |
| 4930625 | 2.1.1.95 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Lig_C | 0.72 | 57.0 | 4.23e-01 | 85.5% | 40.0% |
| 4362035 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.71 | 56.0 | 3.92e-01 | 89.1% | 89.2% |
| 3290961 | 106.1.1.11 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › RsbRD_N | 0.69 | 60.0 | 4.40e-01 | 100.0% | 84.5% |
| 5080157 | 7000.1.1.0 ↗ | alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS | 0.69 | 56.0 | 5.30e-01 | 100.0% | 74.3% |
| 3980686 | 101.1.1.18 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 | 0.69 | 54.0 | 5.62e-01 | 100.0% | 92.0% |
| 3708001 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.68 | 56.0 | 5.25e-01 | 96.4% | 74.3% |
| 3968335 | 101.1.1.18 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 | 0.67 | 54.0 | 5.25e-01 | 100.0% | 80.0% |
| 4993593 | 198.1.1.27 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › PF27234 | 0.65 | 53.0 | 4.89e-01 | 100.0% | 70.0% |
| 4029849 | 109.4.1.31 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MA3 | 0.65 | 54.0 | 4.12e-01 | 94.5% | 41.8% |
| 5075377 | 4995.1.1.1 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 | 0.65 | 52.0 | 4.60e-01 | 96.4% | 70.0% |
| 4400920 | 5076.2.1.6 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › Glucan_synthase | 0.64 | 54.0 | 3.68e-01 | 100.0% | 49.1% |
| 3279151 | 4995.1.1.1 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 | 0.63 | 50.0 | 4.45e-01 | 96.4% | 70.0% |
| 4137468 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.63 | 48.0 | 3.45e-01 | 89.1% | 88.6% |
| 3499048 | 109.4.1.602 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Dor1 | 0.62 | 48.0 | 2.85e-01 | 89.1% | 10.7% |
| 3747265 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.62 | 49.0 | 3.85e-01 | 100.0% | 39.2% |
| 3272203 | 109.4.1.602 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Dor1 | 0.61 | 52.0 | 3.22e-01 | 100.0% | 20.3% |
| 5050014 | 4995.1.1.1 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 | 0.61 | 49.0 | 4.51e-01 | 96.4% | 78.8% |
| 2674763 | 5041.1.1.1 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C | 0.61 | 46.0 | 4.13e-01 | 83.6% | 58.7% |
| 4984709 | 4995.1.1.1 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 | 0.61 | 49.0 | 4.46e-01 | 96.4% | 81.2% |
| 4365052 | 5041.1.1.1 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C | 0.61 | 44.0 | 3.72e-01 | 78.2% | 48.4% |
| 4933898 | 5041.1.1.1 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C | 0.59 | 42.0 | 3.79e-01 | 78.2% | 53.8% |
| 4237524 | 5041.1.1.1 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C | 0.58 | 43.0 | 3.71e-01 | 83.6% | 50.0% |
| 5066226 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.58 | 38.0 | 3.65e-01 | 72.7% | 58.5% |
| 4623297 | 109.4.1.70 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CID | 0.57 | 46.0 | 3.57e-01 | 96.4% | 38.5% |
| 5069662 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.54 | 40.0 | 3.72e-01 | 87.3% | 61.4% |
| 3467691 | 150.5.1.76 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › DUF1110 | 0.54 | 39.0 | 3.53e-01 | 83.6% | 62.4% |
| 3963155 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.54 | 41.0 | 3.74e-01 | 83.6% | 69.3% |
| 3719058 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.53 | 46.0 | 4.07e-01 | 100.0% | 71.8% |
| 3947564 | 605.1.1.4 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA_3 | 0.53 | 40.0 | 3.85e-01 | 83.6% | 72.3% |
| 3980428 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.52 | 41.0 | 3.73e-01 | 90.9% | 64.0% |
| 4513812 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.52 | 41.0 | 3.67e-01 | 85.5% | 98.7% |
| 3508186 | 7558.1.1.1 ↗ | a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Acyltransferase | 0.51 | 42.0 | 2.72e-01 | 100.0% | 26.5% |
D4
high
residues 482-529
Domain cluster:
rep: LacPavin_0818_WC40_scaffold_238879_prodigal-single.1__X__X__00278__D98-161
CATH (83)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2cudA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.91 | 75.0 | 6.28e-01 | 89.6% | 72.2% |
| 1dj7B00 | 2.30.30.50 | Mainly Beta › Roll › SH3 type barrels. › | 0.89 | 78.0 | 6.70e-01 | 95.8% | 100.0% |
| 2do3A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.89 | 76.0 | 7.48e-01 | 93.8% | 96.1% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.88 | 80.0 | 6.99e-01 | 100.0% | 73.9% |
| 3oymA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.88 | 80.0 | 6.95e-01 | 100.0% | 82.9% |
| 5ycqA00 | 2.30.30.390 | Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain | 0.88 | 79.0 | 6.68e-01 | 100.0% | 71.4% |
| 1x6bA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.88 | 73.0 | 6.61e-01 | 91.7% | 90.6% |
| 2eqjA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.87 | 78.0 | 7.03e-01 | 100.0% | 80.3% |
| 1jegA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.87 | 73.0 | 6.75e-01 | 91.7% | 98.3% |
| 4gnxA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.87 | 62.0 | 4.66e-01 | 75.0% | 57.4% |
| 3j7aF03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.87 | 75.0 | 6.57e-01 | 95.8% | 76.1% |
| 6az1E03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.87 | 75.0 | 6.51e-01 | 95.8% | 75.0% |
| 2heqA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.87 | 70.0 | 6.71e-01 | 87.5% | 100.0% |
| 2ct4A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.87 | 70.0 | 6.18e-01 | 89.6% | 82.9% |
| 1y71A00 | 2.30.30.430 | Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain | 0.86 | 78.0 | 5.87e-01 | 100.0% | 57.8% |
| 2digA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.85 | 76.0 | 6.74e-01 | 100.0% | 79.4% |
| 2jxbA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.85 | 70.0 | 5.74e-01 | 91.7% | 66.3% |
| 4n4iA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.85 | 71.0 | 5.68e-01 | 91.7% | 54.4% |
| 2e70A00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.84 | 76.0 | 6.64e-01 | 100.0% | 73.2% |
| 2rcnA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.84 | 61.0 | 5.60e-01 | 77.1% | 96.7% |
| 2rqrA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.84 | 69.0 | 5.11e-01 | 91.7% | 49.6% |
| 4p5nA00 | 2.30.30.1060 | Mainly Beta › Roll › SH3 type barrels. › | 0.84 | 74.0 | 6.41e-01 | 100.0% | 93.2% |
| 3urgA02 | 2.30.30.530 | Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain | 0.83 | 70.0 | 6.39e-01 | 93.8% | 95.2% |
| 2v1rA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.83 | 68.0 | 6.09e-01 | 91.7% | 95.5% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.82 | 73.0 | 6.72e-01 | 100.0% | 95.2% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.82 | 68.0 | 6.26e-01 | 91.7% | 91.9% |
| 4krtB03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.82 | 64.0 | 5.79e-01 | 87.5% | 100.0% |
| 3npfB01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.82 | 68.0 | 6.15e-01 | 93.8% | 95.5% |
| 2dl5A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.81 | 68.0 | 5.82e-01 | 95.8% | 79.5% |
| 2ldmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.81 | 69.0 | 6.75e-01 | 97.9% | 96.2% |
| 3h8zA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.81 | 70.0 | 6.39e-01 | 97.9% | 79.7% |
| 2vknA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.81 | 67.0 | 6.06e-01 | 93.8% | 90.9% |
| 1sf9A02 | 2.30.30.340 | Mainly Beta › Roll › SH3 type barrels. › Hypothetical protein YfhH like domains | 0.80 | 69.0 | 6.72e-01 | 100.0% | 92.6% |
| 3teeA02 | 2.30.30.760 | Mainly Beta › Roll › SH3 type barrels. › | 0.80 | 71.0 | 6.12e-01 | 97.9% | 76.7% |
| 2mysA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.80 | 69.0 | 6.93e-01 | 95.8% | 97.9% |
| 2a5hA03 | 6.20.120.40 | Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.79 | 44.0 | 4.04e-01 | 79.2% | 41.9% |
| 4c5eC02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.79 | 68.0 | 5.48e-01 | 100.0% | 85.4% |
| 1ts9A00 | 2.30.30.210 | Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 | 0.79 | 69.0 | 5.50e-01 | 100.0% | 56.1% |
| 2akkA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.79 | 68.0 | 5.95e-01 | 100.0% | 90.5% |
| 3h41A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.79 | 61.0 | 5.52e-01 | 87.5% | 89.7% |
| 3npfA02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.79 | 62.0 | 5.56e-01 | 89.6% | 90.0% |
| 3fb9B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 66.0 | 5.59e-01 | 100.0% | 77.4% |
| 7razA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.77 | 67.0 | 5.59e-01 | 100.0% | 63.5% |
| 3j7yD02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 65.0 | 5.59e-01 | 100.0% | 92.6% |
| 3udcA02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 66.0 | 6.52e-01 | 97.9% | 94.0% |
| 2hbpA00 | 2.30.30.700 | Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 | 0.76 | 61.0 | 5.48e-01 | 89.6% | 77.3% |
| 7afrX02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.75 | 64.0 | 6.02e-01 | 100.0% | 96.7% |
| 1ssfA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 61.0 | 5.94e-01 | 95.8% | 92.7% |
| 7z0kB01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.75 | 59.0 | 5.43e-01 | 89.6% | 95.3% |
| 5ajiB02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 64.0 | 6.34e-01 | 97.9% | 98.0% |
| 4a53A01 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 62.0 | 5.83e-01 | 97.9% | 88.7% |
| 1y0mA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.74 | 60.0 | 5.58e-01 | 91.7% | 95.1% |
| 1zq1A01 | 2.30.30.520 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 62.0 | 5.46e-01 | 100.0% | 81.8% |
| 1u1sA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 62.0 | 5.69e-01 | 100.0% | 84.8% |
| 2fjrA02 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.72 | 60.0 | 4.68e-01 | 97.9% | 42.5% |
| 7c9rH01 | 3.90.50.10 | Alpha Beta › Alpha-Beta Complex › Photosynthetic Reaction Center; Chain H, domain 2 › Photosynthetic Reaction Center, subunit H, domain 2 | 0.72 | 62.0 | 4.44e-01 | 100.0% | 40.5% |
| 4q66D01 | 6.20.120.50 | Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.71 | 49.0 | 4.31e-01 | 72.9% | 57.5% |
| 1awjA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.71 | 55.0 | 4.82e-01 | 89.6% | 74.0% |
| 4ry2A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.69 | 57.0 | 4.24e-01 | 100.0% | 41.1% |
| 2yf0A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.69 | 56.0 | 4.68e-01 | 93.8% | 82.8% |
| 2k57A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 53.0 | 5.18e-01 | 89.6% | 89.1% |
| 3gqbA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.67 | 58.0 | 5.14e-01 | 100.0% | 67.6% |
| 3pnnA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.66 | 54.0 | 3.40e-01 | 100.0% | 19.3% |
| 2in5A00 | 2.40.360.10 | Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like | 0.65 | 51.0 | 3.47e-01 | 91.7% | 83.6% |
| 3gt2A00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.64 | 55.0 | 4.06e-01 | 100.0% | 37.0% |
| 1oqkA00 | 2.30.30.210 | Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 | 0.64 | 55.0 | 4.75e-01 | 100.0% | 71.8% |
| 1h6vA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.63 | 48.0 | 3.15e-01 | 85.4% | 62.1% |
| 1xovA02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 48.0 | 4.47e-01 | 89.6% | 93.9% |
| 3udfA03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 55.0 | 4.37e-01 | 97.9% | 97.9% |
| 1y13A00 | 3.30.479.10 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD | 0.62 | 44.0 | 3.11e-01 | 77.1% | 57.7% |
| 4py5A01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.61 | 41.0 | 3.68e-01 | 83.3% | 47.2% |
| 6jwfA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.61 | 45.0 | 2.72e-01 | 85.4% | 26.0% |
| 1fx7B03 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.61 | 48.0 | 4.30e-01 | 100.0% | 92.5% |
| 2z4hA01 | 2.40.128.300 | Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain | 0.60 | 47.0 | 4.10e-01 | 89.6% | 97.5% |
| 3h27A00 | 3.50.50.100 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › | 0.59 | 51.0 | 2.98e-01 | 95.8% | 32.9% |
| 4k7zA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.58 | 48.0 | 3.17e-01 | 95.8% | 61.2% |
| 2kjzA01 | 3.30.720.120 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.57 | 40.0 | 3.92e-01 | 83.3% | 68.5% |
| 3wucB00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 45.0 | 3.40e-01 | 97.9% | 81.8% |
| 2k1gA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.54 | 43.0 | 3.37e-01 | 100.0% | 41.9% |
| 6mrc100 | 2.30.33.40 | Mainly Beta › Roll › 10 Kd Chaperonin, Protein Cpn10; Chain O › GroES chaperonin | 0.54 | 38.0 | 3.06e-01 | 100.0% | 37.0% |
| 1a1rA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.54 | 40.0 | 3.52e-01 | 89.6% | 88.2% |
| 5kiqA02 | 3.10.20.890 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.53 | 40.0 | 3.68e-01 | 89.6% | 66.7% |
| 2askA00 | 2.10.90.10 | Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines | 0.53 | 41.0 | 3.31e-01 | 89.6% | 86.1% |
ECOD (100)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3627869 | 4.1.1.347 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 | 0.92 | 85.0 | 5.76e-01 | 100.0% | 37.4% |
| 3938589 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.90 | 75.0 | 7.47e-01 | 89.6% | 92.0% |
| 3598284 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.90 | 82.0 | 7.86e-01 | 100.0% | 87.3% |
| 3518287 | 4.1.1.347 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 | 0.90 | 80.0 | 5.91e-01 | 97.9% | 54.8% |
| 4321173 | 4.1.1.98 ↗ | beta barrels › SH3 › SH3 › SH3 › ProQ_C | 0.89 | 81.0 | 7.59e-01 | 100.0% | 86.2% |
| 3989139 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.89 | 79.0 | 7.12e-01 | 100.0% | 72.3% |
| 4680376 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.89 | 81.0 | 7.75e-01 | 100.0% | 87.3% |
| 4422251 | 4.1.1.98 ↗ | beta barrels › SH3 › SH3 › SH3 › ProQ_C | 0.89 | 78.0 | 7.72e-01 | 95.8% | 96.0% |
| 4084190 | 4.1.1.98 ↗ | beta barrels › SH3 › SH3 › SH3 › ProQ_C | 0.89 | 79.0 | 7.32e-01 | 97.9% | 83.1% |
| 3414063 | 4.1.1.233 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N | 0.89 | 78.0 | 7.48e-01 | 97.9% | 100.0% |
| 4611708 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.88 | 79.0 | 7.28e-01 | 100.0% | 78.3% |
| 4116921 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.88 | 78.0 | 7.25e-01 | 100.0% | 78.3% |
| 4640515 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.88 | 78.0 | 7.73e-01 | 100.0% | 94.0% |
| 4665407 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.88 | 80.0 | 7.97e-01 | 100.0% | 96.0% |
| 4998329 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.88 | 80.0 | 7.67e-01 | 100.0% | 87.3% |
| 3609597 | 4.1.1.236 ↗ | beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 | 0.88 | 79.0 | 7.36e-01 | 100.0% | 80.0% |
| 4347999 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.88 | 78.0 | 7.03e-01 | 100.0% | 72.3% |
| 4662947 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.88 | 78.0 | 7.00e-01 | 100.0% | 72.3% |
| 4191690 | 4.1.1.98 ↗ | beta barrels › SH3 › SH3 › SH3 › ProQ_C | 0.88 | 80.0 | 7.45e-01 | 100.0% | 86.2% |
| 4998870 | 4.1.1.483 ↗ | beta barrels › SH3 › SH3 › SH3 › RRXRR | 0.87 | 80.0 | 6.48e-01 | 100.0% | 56.5% |
| 3839849 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.87 | 77.0 | 6.96e-01 | 100.0% | 72.3% |
| 3278801 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.87 | 77.0 | 6.95e-01 | 100.0% | 72.3% |
| 3781711 | 4.1.1.236 ↗ | beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 | 0.87 | 78.0 | 7.43e-01 | 100.0% | 85.5% |
| 3299797 | 4.1.1.306 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N | 0.87 | 75.0 | 6.92e-01 | 93.8% | 80.0% |
| 3326980 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.87 | 78.0 | 7.25e-01 | 100.0% | 85.0% |
| 3037102 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.87 | 77.0 | 7.10e-01 | 100.0% | 82.3% |
| 3817476 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.87 | 75.0 | 7.48e-01 | 95.8% | 98.0% |
| 3443078 | 4.1.1.330 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O, SH3-C_UBE2O | 0.87 | 78.0 | 5.21e-01 | 100.0% | 28.6% |
| 3428486 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.87 | 78.0 | 6.53e-01 | 100.0% | 63.7% |
| 3684909 | 4.1.1.236 ↗ | beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 | 0.86 | 77.0 | 7.36e-01 | 100.0% | 85.5% |
| 3222210 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.86 | 76.0 | 6.69e-01 | 100.0% | 87.1% |
| 3420348 | 4.1.1.306 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N | 0.86 | 77.0 | 7.39e-01 | 100.0% | 94.5% |
| 2890675 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.86 | 69.0 | 6.29e-01 | 89.6% | 87.5% |
| 3270324 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.86 | 74.0 | 7.36e-01 | 93.8% | 100.0% |
| 3385856 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.85 | 71.0 | 6.47e-01 | 91.7% | 100.0% |
| 4949848 | 4.1.1.364 ↗ | beta barrels › SH3 › SH3 › SH3 › GatD_N | 0.85 | 76.0 | 7.30e-01 | 100.0% | 90.9% |
| 3264883 | 4.1.1.304 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O | 0.85 | 74.0 | 7.06e-01 | 95.8% | 96.4% |
| 3495480 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.85 | 68.0 | 6.38e-01 | 89.6% | 93.3% |
| 3236054 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.85 | 68.0 | 5.88e-01 | 89.6% | 74.7% |
| 3956735 | 6055.1.1.1 ↗ | extended segments › Preprotein translocase subunit YajC › Preprotein translocase subunit YajC › Preprotein translocase subunit YajC › YajC | 0.85 | 69.0 | 7.09e-01 | 91.7% | 95.6% |
| 3649741 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.85 | 75.0 | 6.47e-01 | 100.0% | 69.3% |
| 3482683 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.85 | 68.0 | 6.34e-01 | 89.6% | 93.3% |
| 3514867 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.85 | 69.0 | 5.98e-01 | 91.7% | 76.0% |
| 3996679 | 4.1.1.251 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5 | 0.84 | 73.0 | 7.02e-01 | 97.9% | 90.9% |
| 3240651 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.84 | 69.0 | 5.80e-01 | 91.7% | 71.2% |
| 3673317 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.84 | 74.0 | 7.11e-01 | 100.0% | 100.0% |
| 3931904 | 4.1.1.236 ↗ | beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 | 0.83 | 75.0 | 7.17e-01 | 100.0% | 87.3% |
| 5042477 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 70.0 | 7.23e-01 | 97.9% | 100.0% |
| 3541996 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.83 | 68.0 | 4.50e-01 | 91.7% | 30.0% |
| 4844109 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.83 | 72.0 | 6.22e-01 | 93.8% | 64.8% |
| 4225207 | 4.1.1.236 ↗ | beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 | 0.83 | 75.0 | 6.92e-01 | 100.0% | 80.0% |
| 4157193 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.83 | 73.0 | 6.44e-01 | 100.0% | 82.9% |
| 4172306 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.83 | 74.0 | 5.87e-01 | 100.0% | 57.9% |
| 5037772 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.83 | 75.0 | 5.59e-01 | 100.0% | 49.6% |
| 4226849 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.83 | 73.0 | 6.15e-01 | 100.0% | 73.8% |
| 3587555 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 66.0 | 5.89e-01 | 89.6% | 88.6% |
| 3625177 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.83 | 74.0 | 5.32e-01 | 100.0% | 41.5% |
| 4147366 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.83 | 66.0 | 6.67e-01 | 89.6% | 95.8% |
| 4998726 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 74.0 | 6.20e-01 | 100.0% | 60.0% |
| 4081631 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.82 | 67.0 | 5.83e-01 | 91.7% | 78.7% |
| 4995901 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 75.0 | 7.13e-01 | 100.0% | 87.3% |
| 3938291 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.82 | 73.0 | 5.26e-01 | 100.0% | 41.5% |
| 3404936 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.82 | 72.0 | 7.15e-01 | 95.8% | 94.0% |
| 4368811 | 4.1.1.364 ↗ | beta barrels › SH3 › SH3 › SH3 › GatD_N | 0.82 | 68.0 | 6.59e-01 | 93.8% | 87.3% |
| 3554026 | 4.1.1.233 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N | 0.82 | 71.0 | 6.68e-01 | 100.0% | 96.7% |
| 4432457 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.82 | 72.0 | 6.35e-01 | 100.0% | 82.9% |
| 3193814 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.81 | 73.0 | 5.38e-01 | 100.0% | 46.7% |
| 3224441 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 66.0 | 5.92e-01 | 91.7% | 83.8% |
| 3782325 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.81 | 66.0 | 6.08e-01 | 91.7% | 93.7% |
| 4977469 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.81 | 71.0 | 6.29e-01 | 100.0% | 80.0% |
| 4937423 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 72.0 | 5.93e-01 | 100.0% | 78.8% |
| 3553983 | 4.1.1.233 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N | 0.81 | 71.0 | 6.62e-01 | 100.0% | 96.7% |
| 3336523 | 4.1.1.304 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O | 0.81 | 73.0 | 7.28e-01 | 100.0% | 98.0% |
| 4930861 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.81 | 71.0 | 6.42e-01 | 100.0% | 86.2% |
| 4418620 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.81 | 65.0 | 3.46e-01 | 89.6% | 4.5% |
| 3761440 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 71.0 | 6.78e-01 | 97.9% | 87.3% |
| 5025104 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 65.0 | 6.47e-01 | 91.7% | 92.0% |
| 3546607 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.80 | 69.0 | 6.83e-01 | 95.8% | 94.0% |
| 3998022 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.80 | 69.0 | 6.64e-01 | 95.8% | 85.5% |
| 3915732 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.80 | 68.0 | 5.68e-01 | 97.9% | 72.9% |
| None | — | 0.80 | 69.0 | 3.64e-01 | 95.8% | 3.7% | |
| 3941962 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.80 | 70.0 | 5.71e-01 | 100.0% | 62.2% |
| 3903213 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.80 | 64.0 | 4.31e-01 | 89.6% | 26.3% |
| 3574613 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.80 | 69.0 | 5.34e-01 | 95.8% | 47.0% |
| 5036616 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.79 | 70.0 | 6.20e-01 | 100.0% | 78.6% |
| 4540843 | 4.1.1.434 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2642 | 0.79 | 68.0 | 6.20e-01 | 100.0% | 84.6% |
| 4128902 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 64.0 | 6.32e-01 | 91.7% | 92.0% |
| 4068333 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.78 | 67.0 | 6.16e-01 | 100.0% | 90.8% |
| 4646501 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 67.0 | 4.74e-01 | 100.0% | 34.2% |
| 4963446 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 68.0 | 6.21e-01 | 100.0% | 92.3% |
| 3775592 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.78 | 67.0 | 3.50e-01 | 95.8% | 3.0% |
| 135648 | 4.1.1.142 ↗ | beta barrels › SH3 › SH3 › SH3 › Hfq_1 | 0.78 | 67.0 | 6.13e-01 | 100.0% | 89.2% |
| 4093911 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.78 | 66.0 | 5.79e-01 | 100.0% | 80.0% |
| 5035934 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.77 | 68.0 | 6.20e-01 | 100.0% | 84.6% |
| 4996195 | 304.39.1.6 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_2nd | 0.77 | 66.0 | 6.13e-01 | 95.8% | 81.7% |
| 4927653 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.77 | 67.0 | 6.11e-01 | 100.0% | 84.6% |
| 4158712 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.77 | 65.0 | 5.86e-01 | 100.0% | 84.3% |
| 4978125 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.75 | 63.0 | 6.44e-01 | 93.8% | 100.0% |
| 4248855 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.73 | 60.0 | 5.40e-01 | 100.0% | 81.1% |
| 4027119 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.56 | 44.0 | 3.19e-01 | 87.5% | 61.5% |
D5
high
residues 552-615
D6
medium
residues 99-165
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2fa8B00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.67 | 56.0 | 5.16e-01 | 92.5% | 75.9% |
| 2x49A01 | 3.40.30.60 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › FHIPEP family, domain 1 | 0.66 | 56.0 | 5.06e-01 | 100.0% | 85.4% |
| 7lgjA01 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.65 | 51.0 | 3.50e-01 | 85.1% | 93.1% |
| 1p9oA00 | 3.40.50.10300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like | 0.64 | 53.0 | 3.54e-01 | 94.0% | 84.8% |
| 3rkxA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.63 | 54.0 | 3.94e-01 | 100.0% | 43.5% |
| 1c4kA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.60 | 51.0 | 3.86e-01 | 100.0% | 81.7% |
| 2od0A00 | 3.30.1460.30 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › YgaC/TfoX-N like chaperone | 0.59 | 48.0 | 4.31e-01 | 97.0% | 100.0% |
| 2cjgA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.59 | 49.0 | 3.89e-01 | 98.5% | 63.0% |
| 1hfxA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.58 | 50.0 | 4.11e-01 | 97.0% | 81.3% |
| 3iv4A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.58 | 44.0 | 3.80e-01 | 85.1% | 71.4% |
| 5xf9A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.58 | 45.0 | 4.13e-01 | 89.6% | 83.9% |
| 1rm6A05 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.58 | 48.0 | 3.64e-01 | 98.5% | 37.6% |
| 2abwA00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.57 | 49.0 | 3.51e-01 | 100.0% | 95.4% |
| 1zh8A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.57 | 46.0 | 3.48e-01 | 94.0% | 40.7% |
| 5jrjA02 | 3.30.250.10 | Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › RecA protein, C-terminal domain | 0.56 | 37.0 | 3.87e-01 | 82.1% | 76.3% |
| 6lcuA01 | 3.30.1590.10 | Alpha Beta › 2-Layer Sandwich › Maltooligosyl trehalose synthase, domain 2 › Maltooligosyl trehalose synthase, domain 2 | 0.56 | 37.0 | 3.22e-01 | 71.6% | 43.5% |
| 3es5A02 | 1.20.272.60 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.55 | 38.0 | 3.22e-01 | 74.6% | 79.5% |
| 2k5iA02 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.55 | 38.0 | 3.66e-01 | 73.1% | 76.9% |
| 1r7lA00 | 3.30.2120.10 | Alpha Beta › 2-Layer Sandwich › Bacillus phage protein › Bacillus phage protein-like | 0.54 | 41.0 | 3.60e-01 | 82.1% | 54.4% |
| 1xp8A02 | 3.30.250.10 | Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › RecA protein, C-terminal domain | 0.54 | 36.0 | 3.79e-01 | 82.1% | 75.0% |
| 4la1A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.54 | 42.0 | 3.84e-01 | 91.0% | 81.6% |
| 3m4xA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 45.0 | 3.04e-01 | 100.0% | 26.2% |
| 5jy6B01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 40.0 | 3.08e-01 | 83.6% | 75.1% |
| 1pvdA02 | 3.40.50.1220 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain | 0.53 | 44.0 | 3.53e-01 | 98.5% | 76.0% |
| 1r0vA01 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.53 | 38.0 | 3.69e-01 | 77.6% | 92.2% |
| 5hr9A02 | 3.30.210.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 3 › DNA polymerase, thumb domain | 0.53 | 38.0 | 3.82e-01 | 79.1% | 82.6% |
| 2gjwC01 | 3.40.1350.150 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.53 | 40.0 | 3.25e-01 | 85.1% | 52.9% |
| 5i9eA03 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.52 | 37.0 | 3.16e-01 | 76.1% | 52.2% |
| 2q07A02 | 3.10.450.90 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › ArcTGT, C2 domain | 0.52 | 42.0 | 4.24e-01 | 97.0% | 96.9% |
| 1ib6A02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.51 | 36.0 | 2.72e-01 | 74.6% | 34.9% |
| 1rlmA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.51 | 40.0 | 3.12e-01 | 89.6% | 95.1% |
| 2og5A00 | 3.60.130.10 | Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Clavaminate synthase-like | 0.50 | 43.0 | 2.84e-01 | 100.0% | 69.2% |
| 7qaqA01 | 3.40.50.11710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase | 0.50 | 34.0 | 2.49e-01 | 73.1% | 31.9% |
| 1d0qA00 | 3.90.580.10 | Alpha Beta › Alpha-Beta Complex › DNA Primase; Chain A › Zinc finger, CHC2-type domain | 0.50 | 35.0 | 3.05e-01 | 73.1% | 86.3% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3179206 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.69 | 54.0 | 5.18e-01 | 86.6% | 94.9% |
| 3288510 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.68 | 53.0 | 3.56e-01 | 85.1% | 85.4% |
| 4325853 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.68 | 53.0 | 4.61e-01 | 86.6% | 98.1% |
| 4276713 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.66 | 51.0 | 3.47e-01 | 85.1% | 83.1% |
| 4086102 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.66 | 52.0 | 3.67e-01 | 86.6% | 82.9% |
| 3874350 | 330.1.1.17 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm_Ferlin | 0.66 | 49.0 | 4.10e-01 | 79.1% | 62.6% |
| 3903050 | 330.1.1.17 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm_Ferlin | 0.66 | 52.0 | 4.56e-01 | 86.6% | 78.0% |
| 3935569 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.61 | 50.0 | 4.14e-01 | 94.0% | 60.8% |
| 4203354 | 252.2.1.9 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › PF27551 | 0.61 | 49.0 | 4.52e-01 | 95.5% | 87.4% |
| 3390093 | 330.1.1.17 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm_Ferlin | 0.61 | 47.0 | 4.36e-01 | 85.1% | 72.9% |
| 3799246 | 3409.1.1.1 ↗ | a+b duplicates or obligate multimers › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › APG6 | 0.61 | 44.0 | 3.24e-01 | 77.6% | 69.7% |
| 4886308 | 3253.1.1.1 ↗ | a+b two layers › ferredoxin-like domain in flagellar biosynthesis protein flhA › ferredoxin-like domain in flagellar biosynthesis protein flhA › ferredoxin-like domain in flagellar biosynthesis protein flhA › FHIPEP | 0.60 | 49.0 | 4.41e-01 | 95.5% | 83.0% |
| 4285697 | 3439.1.1.0 ↗ | a+b two layers › PafA/Dop C-terminal domain › PafA/Dop C-terminal domain › PafA/Dop C-terminal domain | 0.60 | 45.0 | 4.72e-01 | 92.5% | 94.9% |
| 4258207 | 502.1.1.1 ↗ | a+b two layers › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › RecA_C | 0.60 | 39.0 | 4.26e-01 | 85.1% | 81.8% |
| 4214233 | 502.1.1.1 ↗ | a+b two layers › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › RecA_C | 0.60 | 39.0 | 3.70e-01 | 85.1% | 54.2% |
| 3577804 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.59 | 49.0 | 4.17e-01 | 92.5% | 60.0% |
| 4504505 | 502.1.1.1 ↗ | a+b two layers › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › RecA_C | 0.59 | 39.0 | 4.08e-01 | 85.1% | 75.0% |
| 4172605 | 3016.1.1.1 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 | 0.59 | 43.0 | 3.87e-01 | 79.1% | 88.4% |
| 4953676 | 314.1.1.8 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › DUF366 | 0.58 | 48.0 | 3.55e-01 | 95.5% | 42.1% |
| 4998739 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.58 | 48.0 | 3.14e-01 | 97.0% | 93.0% |
| 4594252 | 330.1.1.17 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm_Ferlin | 0.58 | 42.0 | 3.75e-01 | 79.1% | 62.0% |
| 4946376 | 231.1.2.7 ↗ | a+b two layers › MocoBD/DmpA-related › MocoBD/DmpA-related › DmpA/ArgJ › MoCoBD_2 | 0.57 | 48.0 | 2.86e-01 | 100.0% | 53.5% |
| 4442448 | 3439.1.1.0 ↗ | a+b two layers › PafA/Dop C-terminal domain › PafA/Dop C-terminal domain › PafA/Dop C-terminal domain | 0.57 | 43.0 | 4.45e-01 | 92.5% | 93.3% |
| 4485228 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 37.0 | 2.40e-01 | 70.1% | 83.9% |
| 4250277 | 502.1.1.1 ↗ | a+b two layers › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › RecA_C | 0.55 | 39.0 | 3.92e-01 | 82.1% | 71.4% |
| 1174966 | 4.1.1.40 ↗ | beta barrels › SH3 › SH3 › SH3 › FeoA | 0.54 | 38.0 | 3.52e-01 | 73.1% | 70.6% |
| 3583571 | 833.1.1.0 ↗ | a+b duplicates or obligate multimers › Pepsin inhibitor-3 › Pepsin inhibitor-3 › Pepsin inhibitor-3 | 0.54 | 41.0 | 3.59e-01 | 83.6% | 95.3% |
| 4991135 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.54 | 31.0 | 2.68e-01 | 91.0% | 33.3% |
| 4270827 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.53 | 36.0 | 2.74e-01 | 71.6% | 31.7% |
| 4242924 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.53 | 42.0 | 3.01e-01 | 88.1% | 28.8% |
| 3382895 | 7579.1.1.92 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1, Abhydrolase_6 | 0.53 | 34.0 | 2.22e-01 | 97.0% | 12.6% |
| 4339052 | 502.1.1.1 ↗ | a+b two layers › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › RecA_C | 0.53 | 37.0 | 3.53e-01 | 80.6% | 62.5% |
| 4646065 | 102.8.1.0 ↗ | alpha arrays › HhH/H2TH › UPF0348 protein MJ0951 C-terminal domain › UPF0348 protein MJ0951 C-terminal domain | 0.53 | 35.0 | 2.42e-01 | 70.1% | 63.1% |
| 3339444 | 4001.1.1.4 ↗ | a+b duplicates or obligate multimers › a+b domain in cullin-like proteins › a+b domain in cullin-like proteins › a+b domain in cullin-like proteins › Cullin_AB | 0.53 | 37.0 | 3.21e-01 | 74.6% | 72.4% |
| 3211387 | 327.19.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain › Mlh1_C | 0.52 | 41.0 | 3.64e-01 | 89.6% | 92.4% |
| 3719197 | 2003.4.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes | 0.51 | 36.0 | 2.78e-01 | 74.6% | 71.4% |
| 5059471 | 7512.1.1.32 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_1_4 | 0.51 | 42.0 | 3.10e-01 | 100.0% | 74.1% |
| 3962196 | 502.1.1.0 ↗ | a+b two layers › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain | 0.50 | 35.0 | 3.54e-01 | 82.1% | 72.9% |
D7
medium
residues 326-372_392-409