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BML_08012017_9_75m_scaffold_2_prodigal-single.1__X__X__00131
Bact-VirBML_08012017_9_75m_scaffold_2_prodigal-single.1__X__X__00131
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-109
Domain cluster:
rep: IMGVR_UViG_3300024573_000922-3300024573-Ga0256337_10130345__D9-106
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1c9bA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.68 | 46.0 | 4.79e-01 | 82.5% | 74.2% |
| 3smvA02 | 1.10.150.750 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.67 | 46.0 | 5.13e-01 | 83.5% | 93.5% |
| 1aisB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.65 | 45.0 | 4.63e-01 | 82.5% | 74.7% |
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.65 | 44.0 | 4.60e-01 | 80.6% | 76.6% |
| 4m70B00 | 1.10.246.200 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › WPP domain | 0.65 | 46.0 | 4.83e-01 | 72.8% | 91.2% |
| 1binA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.64 | 44.0 | 3.97e-01 | 70.9% | 90.9% |
| 1vx7X00 | 3.30.1360.210 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.63 | 48.0 | 4.97e-01 | 81.6% | 99.0% |
| 3ddhA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.60 | 43.0 | 4.67e-01 | 80.6% | 93.8% |
| 1b96A00 | 3.40.600.10 | Alpha Beta › 3-Layer(aba) Sandwich › ECO RV Endonuclease; Chain A › DNA mismatch repair MutH/Restriction endonuclease, type II | 0.59 | 41.0 | 3.13e-01 | 71.8% | 49.6% |
| 3owaB04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.56 | 41.0 | 3.56e-01 | 76.7% | 69.4% |
| 6juvB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 36.0 | 4.12e-01 | 88.3% | 94.7% |
| 3keyA01 | 1.10.10.1080 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Stn1, N-terminal wHTH domain | 0.54 | 35.0 | 3.78e-01 | 74.8% | 78.2% |
| 8cdaB03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.53 | 37.0 | 3.20e-01 | 71.8% | 83.6% |
| 4kmfA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 25.0 | 3.03e-01 | 75.7% | 69.4% |
| 4ha8A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 31.0 | 3.77e-01 | 85.4% | 96.8% |
| 3euhC02 | 1.10.10.2260 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MukE-like family, C-terminal domain | 0.52 | 36.0 | 3.62e-01 | 79.6% | 69.4% |
| 3x3bA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.51 | 37.0 | 2.82e-01 | 78.6% | 55.0% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4343334 | 3715.1.1.1 ↗ | a+b two layers › Ribosomal protein L22e › Ribosomal protein L22e › Ribosomal protein L22e › Ribosomal_L22e | 0.61 | 46.0 | 4.70e-01 | 81.6% | 95.0% |
| 3757540 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.59 | 42.0 | 2.94e-01 | 73.8% | 91.2% |
| 3242420 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.59 | 41.0 | 2.87e-01 | 70.9% | 52.1% |
| 3988425 | 101.1.2.92 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_11 | 0.57 | 35.0 | 3.90e-01 | 86.4% | 78.8% |
| 5068089 | 283.1.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase | 0.55 | 38.0 | 3.73e-01 | 70.9% | 78.3% |
| 3924509 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.55 | 38.0 | 2.71e-01 | 72.8% | 30.6% |
| 3228232 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.54 | 38.0 | 2.75e-01 | 72.8% | 31.9% |
| 3988603 | 101.1.2.92 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_11 | 0.54 | 36.0 | 3.95e-01 | 85.4% | 82.4% |
| 3697543 | 101.1.17.21 ↗ | alpha arrays › HTH › HTH › FF domain › Tri-helical | 0.54 | 36.0 | 3.86e-01 | 79.6% | 78.9% |
| 4559320 | 883.1.1.1 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP | 0.54 | 38.0 | 3.08e-01 | 72.8% | 72.7% |
| 3697747 | 3016.1.1.1 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 | 0.53 | 37.0 | 3.06e-01 | 73.8% | 79.0% |
| 3590781 | 101.1.2.92 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_11 | 0.52 | 33.0 | 3.55e-01 | 86.4% | 73.3% |
| 3788956 | 5081.1.1.2 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › DER1 | 0.52 | 45.0 | 3.47e-01 | 95.1% | 67.7% |
| 3534305 | 237.1.1.2 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ART | 0.52 | 44.0 | 3.43e-01 | 93.2% | 88.2% |
| 3173183 | 101.1.2.134 ↗ | alpha arrays › HTH › HTH › winged helix domain › Stn1_C | 0.52 | 35.0 | 3.72e-01 | 76.7% | 77.8% |
| 4954890 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.51 | 25.0 | 2.78e-01 | 77.7% | 53.8% |
| 4556247 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.50 | 35.0 | 2.69e-01 | 92.2% | 29.6% |