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BML_08042016_6_5m_scaffold_14_prodigal-single.1__X__X__00115
Bact-VirBML_08042016_6_5m_scaffold_14_prodigal-single.1__X__X__00115
Identity
- Kingdom:
- phage
Quality
83.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 122-208
Domain cluster:
rep: OV032902.1__CAH0447963.1__SM033_00139__00139__D168-264
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1qexA02 | 2.60.120.640 | Mainly Beta › Sandwich › Jelly Rolls › gp9 | 0.86 | 80.0 | 7.52e-01 | 100.0% | 93.2% |
| 1hf2A02 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.62 | 50.0 | 4.75e-01 | 100.0% | 73.6% |
| 2nncA00 | 2.60.40.2470 | Mainly Beta › Sandwich › Immunoglobulin-like › SoxY domain | 0.59 | 42.0 | 3.90e-01 | 93.1% | 58.2% |
| 4v02C00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.57 | 49.0 | 4.39e-01 | 100.0% | 68.0% |
| 5lwxA03 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.52 | 42.0 | 3.31e-01 | 94.3% | 59.3% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 184462 | 520.1.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › gp9 N-terminal domain-related › gp9 N-terminal domain-related › T4_gp9_10 | 0.86 | 80.0 | 6.28e-01 | 100.0% | 57.1% |
| 1070458 | 520.1.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › gp9 N-terminal domain-related › gp9 N-terminal domain-related › T4_gp9_10 | 0.85 | 79.0 | 6.33e-01 | 100.0% | 63.1% |
| 3942383 | 520.2.1.0 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE | 0.72 | 65.0 | 6.44e-01 | 100.0% | 95.6% |
| 4941490 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.67 | 48.0 | 4.20e-01 | 77.0% | 75.6% |
| 4940715 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.62 | 46.0 | 4.28e-01 | 78.2% | 90.9% |
| 5030451 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.62 | 45.0 | 4.31e-01 | 77.0% | 93.3% |
| 4493843 | 207.5.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C | 0.61 | 51.0 | 4.83e-01 | 100.0% | 77.1% |
| 3519196 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 46.0 | 4.28e-01 | 80.5% | 81.8% |
| 4651440 | 207.5.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C | 0.60 | 50.0 | 4.73e-01 | 100.0% | 74.5% |
| 4520582 | 206.1.3.63 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › GARS_A, CPSase_L_D2 | 0.59 | 40.0 | 2.78e-01 | 92.0% | 21.4% |
| 3022615 | 3156.3.1.0 ↗ | beta sandwiches › Cupredoxin-like › Surface antigen 1 (SAG1)-related-sequence (SRS) family › Surface antigen 1 (SAG1)-related-sequence (SRS) family | 0.55 | 45.0 | 3.60e-01 | 92.0% | 65.4% |
| 3485798 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 43.0 | 3.65e-01 | 97.7% | 81.3% |