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BML_08042016_6_5m_scaffold_18_prodigal-single.1__X__X__00017

Bact-Vir

BML_08042016_6_5m_scaffold_18_prodigal-single.1__X__X__00017

Identity

Kingdom:
phage

Quality

89.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-74
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1xb2B01 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.57 41.0 4.30e-01 79.4% 90.0%
5dz2A00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.57 43.0 2.82e-01 83.8% 53.4%
3e0sA00 1.40.20.10 Mainly Alpha › Alpha solenoid › CHAD domain › CHAD domain 0.55 37.0 2.47e-01 70.6% 61.5%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4050231 149.1.1.1 alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.64 48.0 2.91e-01 82.4% 60.4%
2675235 148.1.3.32 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RuBisCO_activase_AAA_helical 0.61 45.0 3.84e-01 83.8% 72.0%
3455437 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.59 46.0 4.44e-01 89.7% 95.0%
3286507 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.54 46.0 3.92e-01 100.0% 69.2%
4246492 3843.1.1.4 alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › PhaG_MnhG_YufB 0.51 35.0 3.16e-01 70.6% 82.1%
D2 medium residues 75-236
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF14284.12 best PcfJ 31.9 1.60e-07 69.8% 62.5%
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2jlmA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.67 51.0 4.94e-01 77.8% 91.0%
1vhsA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.67 49.0 4.96e-01 76.5% 95.2%
3gy9A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.67 50.0 5.21e-01 77.2% 91.9%
2cy2A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.66 49.0 4.85e-01 76.5% 94.8%
3tthB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.66 50.0 5.07e-01 79.0% 97.0%
3g3sA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.66 48.0 5.24e-01 79.6% 91.7%
3n7zA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.65 49.0 5.03e-01 77.8% 80.3%
2hv2A03 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.65 49.0 5.13e-01 77.8% 87.2%
7b3aA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.65 49.0 5.11e-01 78.4% 85.2%
3lodA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.65 49.0 5.14e-01 77.8% 95.2%
7pk0A01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.64 47.0 5.17e-01 76.5% 93.1%
3d8pB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.64 47.0 4.82e-01 76.5% 95.6%
4rs2A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.64 48.0 4.66e-01 77.8% 80.6%
1ufhA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.63 48.0 4.89e-01 77.8% 96.1%
4iusA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.63 48.0 4.09e-01 78.4% 49.4%
2i00A02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.63 47.0 4.83e-01 77.8% 79.9%
4h89A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.63 48.0 4.80e-01 79.6% 96.4%
3s6fA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.62 46.0 4.88e-01 77.2% 86.6%
1vkcA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.62 45.0 4.84e-01 75.3% 100.0%
4ua3A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.62 48.0 4.60e-01 80.9% 94.1%
5c82A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.59 44.0 4.41e-01 77.8% 96.5%
3efaA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 47.0 4.98e-01 87.0% 95.2%
8t5tA01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.52 30.0 2.90e-01 82.7% 48.1%
1k92A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.52 30.0 3.10e-01 73.5% 56.2%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3980302 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.80 67.0 6.71e-01 86.4% 98.8%
4978477 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.72 50.0 5.50e-01 77.8% 85.9%
3164768 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.71 52.0 5.60e-01 75.3% 96.4%
3800712 213.1.1.37 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_18 0.70 48.0 4.68e-01 77.8% 63.4%
4927195 213.1.1.27 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_7 0.70 53.0 4.68e-01 79.0% 57.4%
4034455 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.69 53.0 5.38e-01 79.0% 96.9%
5053238 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.69 52.0 4.82e-01 77.2% 96.0%
3199238 213.1.1.77 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1, Acetyltransf_7 0.69 52.0 4.85e-01 77.8% 97.0%
3924544 213.1.1.81 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › DUF7596 0.69 49.0 3.82e-01 77.8% 35.2%
4949019 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.68 52.0 4.34e-01 79.0% 55.5%
3617390 213.1.1.37 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_18 0.68 52.0 5.07e-01 79.0% 75.4%
3258255 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.68 51.0 5.28e-01 78.4% 96.1%
4291405 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.68 48.0 5.08e-01 76.5% 81.4%
3236912 213.1.1.37 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_18 0.68 52.0 5.05e-01 79.0% 75.4%
3228597 213.1.1.49 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › DUF1248 0.67 51.0 5.63e-01 78.4% 98.5%
4449996 213.1.1.27 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_7 0.67 47.0 5.46e-01 74.1% 100.0%
5020065 213.1.1.53 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_6 0.67 51.0 5.16e-01 77.8% 85.0%
3517752 213.1.1.37 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_18 0.67 50.0 4.97e-01 79.0% 73.5%
3220428 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.67 51.0 4.85e-01 77.8% 73.0%
3930767 213.1.1.37 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_18 0.67 51.0 4.94e-01 79.0% 74.4%
4029696 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.67 52.0 5.36e-01 80.9% 91.6%
3996874 213.1.1.37 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_18 0.67 50.0 4.92e-01 77.8% 74.9%
3989827 213.1.1.7 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › FemAB 0.67 50.0 4.99e-01 77.8% 82.4%
3233569 213.1.1.37 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_18 0.67 50.0 4.86e-01 77.8% 71.1%
None 0.66 51.0 4.95e-01 79.0% 90.9%
4929304 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.66 49.0 5.41e-01 76.5% 100.0%
4982526 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.66 56.0 4.68e-01 89.5% 91.9%
4672365 213.1.1.21 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › LPG_synthase_C 0.66 50.0 4.39e-01 77.8% 76.5%
5074229 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.66 49.0 4.89e-01 77.2% 85.3%
3212546 213.1.1.49 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › DUF1248 0.66 50.0 5.00e-01 78.4% 79.4%
3226476 213.1.1.37 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_18 0.66 49.0 4.87e-01 77.8% 73.5%
3224176 213.1.1.49 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › DUF1248 0.66 47.0 4.86e-01 78.4% 78.0%
3625615 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.66 50.0 5.32e-01 79.6% 95.9%
3212650 213.1.1.37 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_18 0.66 50.0 4.89e-01 78.4% 74.9%
5078043 213.1.1.32 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › GNAT_acetyltr_2 0.66 55.0 4.63e-01 89.5% 92.2%
3395625 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.65 50.0 4.71e-01 79.6% 78.5%
1383194 213.1.1.36 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_17 0.65 49.0 5.07e-01 77.8% 81.8%
3955931 213.1.1.21 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › LPG_synthase_C 0.65 49.0 4.43e-01 77.8% 77.7%
3586884 213.1.1.36 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_17 0.65 49.0 5.04e-01 77.8% 83.2%
4970837 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.65 55.0 4.60e-01 89.5% 92.6%
5054647 213.1.1.32 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › GNAT_acetyltr_2 0.65 54.0 4.76e-01 88.9% 98.3%
2792256 213.1.1.24 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › GNAT_acetyltran 0.65 49.0 4.98e-01 78.4% 80.4%
4997714 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.65 48.0 5.04e-01 77.2% 89.2%
4025066 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.64 49.0 4.60e-01 78.4% 86.1%
3730063 213.1.1.21 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › LPG_synthase_C 0.64 49.0 4.22e-01 79.0% 83.2%
4601006 213.1.1.27 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_7 0.64 49.0 4.94e-01 79.0% 100.0%
4015840 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.64 48.0 4.43e-01 77.8% 81.4%
3265486 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.64 57.0 5.15e-01 94.4% 77.1%
4165468 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.64 48.0 4.60e-01 78.4% 96.3%
None 0.64 54.0 4.67e-01 90.1% 97.2%
3266200 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.64 48.0 5.11e-01 79.0% 100.0%
3514747 213.1.1.36 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_17 0.64 48.0 4.98e-01 77.8% 85.3%
3505140 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.63 48.0 4.83e-01 79.0% 78.8%
1124203 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.63 48.0 5.00e-01 78.4% 84.7%
3952307 213.1.1.31 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_10 0.63 47.0 4.84e-01 77.2% 92.3%
3183492 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.63 48.0 4.54e-01 79.0% 80.5%
3290842 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.62 47.0 4.65e-01 78.4% 78.9%
3284610 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.62 51.0 4.89e-01 86.4% 91.4%
3791305 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.62 48.0 4.41e-01 80.9% 63.9%
4327135 213.1.1.10 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Leu_Phe_trans 0.61 46.0 3.95e-01 77.8% 53.7%
4941377 213.1.1.27 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_7 0.60 51.0 5.16e-01 92.6% 92.5%
2816343 213.1.1.27 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_7 0.58 48.0 4.99e-01 88.3% 92.9%
4103291 2007.1.14.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › ZnuA 0.58 29.0 3.29e-01 71.0% 60.8%
3601740 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.56 44.0 3.99e-01 82.7% 78.6%
5049779 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.55 41.0 4.04e-01 77.2% 70.9%
4975453 844.1.1.2 beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR 0.52 37.0 3.65e-01 72.2% 89.3%
5040742 844.1.1.2 beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR 0.51 37.0 3.57e-01 74.7% 76.2%
D3 medium residues 237-333
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1hg8A00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.79 72.0 4.84e-01 100.0% 51.0%
3jx8A00 2.160.20.120 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.77 71.0 5.18e-01 100.0% 39.3%
4oj5C04 2.160.20.130 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.72 64.0 5.18e-01 99.0% 62.7%
5jlvC00 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.71 61.0 6.18e-01 95.9% 94.8%
2b0rB00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.69 62.0 5.29e-01 100.0% 62.7%
3sb4A01 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.68 61.0 5.01e-01 100.0% 84.7%
1hf2A02 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.62 53.0 5.14e-01 90.7% 95.3%
4v02C00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.57 51.0 4.74e-01 100.0% 78.7%
2nutB04 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.57 46.0 3.59e-01 91.8% 73.3%
3b85A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 44.0 3.55e-01 92.8% 64.2%
6ie0A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 41.0 3.78e-01 89.7% 89.6%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4020264 208.1.1.0 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.88 77.0 7.49e-01 100.0% 84.8%
5041137 207.14.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A 0.86 59.0 6.88e-01 77.3% 97.1%
4971789 208.1.1.0 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.85 70.0 6.27e-01 100.0% 64.6%
4935712 207.14.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A 0.84 72.0 6.22e-01 100.0% 60.7%
3229795 207.14.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A 0.83 76.0 6.34e-01 96.9% 59.5%
5002393 207.14.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A 0.82 69.0 6.41e-01 100.0% 72.5%
3945380 207.14.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin 0.82 66.0 6.56e-01 100.0% 82.0%
3963707 207.14.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A 0.80 61.0 6.63e-01 100.0% 97.5%
3391275 208.1.1.0 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.80 62.0 6.04e-01 100.0% 75.2%
4406918 207.6.1.16 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › FARP 0.80 67.0 6.02e-01 100.0% 66.9%
5050663 208.1.1.0 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.78 73.0 5.38e-01 100.0% 44.6%
4965634 207.14.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin 0.76 70.0 6.31e-01 100.0% 93.8%
4935713 207.14.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin 0.76 69.0 6.56e-01 100.0% 96.5%
3613280 207.6.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C 0.73 66.0 4.02e-01 100.0% 27.4%
4643528 208.2.1.11 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain › Ice_nucleation 0.73 55.0 5.31e-01 100.0% 70.9%
3186357 207.6.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C 0.73 67.0 4.69e-01 100.0% 37.2%
3598057 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.72 67.0 4.41e-01 100.0% 32.7%
4591904 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.70 56.0 4.24e-01 87.6% 81.7%
4512437 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.64 57.0 4.19e-01 100.0% 89.3%
4183596 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.64 56.0 4.17e-01 100.0% 92.7%