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BML_08042016_6_5m_scaffold_18_prodigal-single.1__X__X__00061
Bact-VirBML_08042016_6_5m_scaffold_18_prodigal-single.1__X__X__00061
Identity
- Kingdom:
- phage
Quality
78.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-67
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2azeB00 | 6.10.250.540 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.67 | 46.0 | 4.05e-01 | 71.6% | 91.1% |
| 1i5eA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.64 | 45.0 | 3.18e-01 | 97.0% | 24.0% |
| 3mk7C01 | 6.10.280.130 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 42.0 | 3.80e-01 | 74.6% | 52.1% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3989573 | 601.14.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Hemerythrin › Hemerythrin › Hemerythrin | 0.65 | 44.0 | 3.06e-01 | 70.1% | 58.6% |
| 3516580 | 4001.1.1.4 ↗ | a+b duplicates or obligate multimers › a+b domain in cullin-like proteins › a+b domain in cullin-like proteins › a+b domain in cullin-like proteins › Cullin_AB | 0.63 | 36.0 | 2.99e-01 | 70.1% | 33.0% |
| 5042930 | 3563.1.1.1 ↗ | alpha bundles › Twin arginine protein translocation system component TatC › Twin arginine protein translocation system component TatC › Twin arginine protein translocation system component TatC › TatC | 0.60 | 49.0 | 3.36e-01 | 91.0% | 87.5% |
| 3909510 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.60 | 46.0 | 2.90e-01 | 83.6% | 83.1% |
| 3684538 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.60 | 41.0 | 3.03e-01 | 71.6% | 100.0% |
| 5039979 | 604.2.1.1 ↗ | alpha bundles › Spectrin repeat-like › Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain › Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain › Succ_DH_flav_C | 0.60 | 40.0 | 3.22e-01 | 70.1% | 41.5% |
| 3792911 | 101.1.2.312 ↗ | alpha arrays › HTH › HTH › winged helix domain › MSC | 0.58 | 43.0 | 3.56e-01 | 77.6% | 67.0% |
| 3381794 | 207.1.1.57 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRRNT_2,LRR_4,LRR_6,LRR_8 | 0.57 | 42.0 | 2.30e-01 | 77.6% | 6.3% |
| 5000798 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.57 | 44.0 | 3.10e-01 | 80.6% | 53.0% |
| 3221418 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.57 | 47.0 | 3.02e-01 | 92.5% | 73.9% |
| 3994737 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 48.0 | 2.78e-01 | 94.0% | 95.1% |
| 5060820 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.55 | 49.0 | 2.92e-01 | 97.0% | 54.1% |
| 3233638 | 5001.1.1.66 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Srg | 0.54 | 46.0 | 3.02e-01 | 94.0% | 75.3% |
| 3327381 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.53 | 38.0 | 2.17e-01 | 77.6% | 29.2% |
| 5007153 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.52 | 45.0 | 3.69e-01 | 95.5% | 75.8% |
| 3958077 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.50 | 32.0 | 2.57e-01 | 70.1% | 26.1% |