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BML_08042016_6_5m_scaffold_18_prodigal-single.1__X__X__00107
Bact-VirBML_08042016_6_5m_scaffold_18_prodigal-single.1__X__X__00107
Identity
- Kingdom:
- phage
Quality
87.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 74-156
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hgzA02 | 2.20.25.570 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.63 | 31.0 | 3.52e-01 | 100.0% | 60.0% |
| 3e56A00 | 6.20.180.10 | Special › Other non-globular › Ubiquitin-like (UB roll) › | 0.62 | 37.0 | 3.90e-01 | 88.0% | 65.3% |
| 6n9aB02 | 3.30.420.200 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.60 | 29.0 | 3.18e-01 | 100.0% | 52.2% |
| 1ekeA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.55 | 39.0 | 3.15e-01 | 100.0% | 36.8% |
| 2qkdA01 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.54 | 27.0 | 3.31e-01 | 100.0% | 77.1% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4031285 | 1.1.13.64 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › TT1_Tal | 0.55 | 30.0 | 2.98e-01 | 98.8% | 46.7% |
| 3815956 | 7579.1.1.42 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Hydrolase_4 | 0.52 | 40.0 | 2.70e-01 | 86.7% | 72.8% |
D2
medium
residues 1-73
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3loiA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.68 | 50.0 | 3.83e-01 | 76.7% | 55.0% |
| 2qjvA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.67 | 46.0 | 3.62e-01 | 71.2% | 77.3% |
| 8h68A01 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.67 | 46.0 | 3.23e-01 | 71.2% | 36.8% |
| 4lejA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.66 | 45.0 | 3.47e-01 | 71.2% | 100.0% |
| 5cadA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 48.0 | 3.58e-01 | 82.2% | 92.7% |
| 6l4cA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 48.0 | 3.59e-01 | 80.8% | 39.7% |
| 4yrdA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 45.0 | 3.86e-01 | 75.3% | 61.3% |
| 1xruA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 45.0 | 3.56e-01 | 76.7% | 51.0% |
| 6l9iA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 44.0 | 3.38e-01 | 75.3% | 39.4% |
| 1cauA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 47.0 | 3.55e-01 | 80.8% | 96.7% |
| 1uasA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.61 | 42.0 | 3.99e-01 | 71.2% | 89.8% |
| 6b9tF02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.60 | 43.0 | 3.84e-01 | 76.7% | 67.0% |
| 5by5A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.60 | 41.0 | 3.57e-01 | 71.2% | 59.1% |
| 1ywkC00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.60 | 44.0 | 3.10e-01 | 79.5% | 43.5% |
| 5u55A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.60 | 43.0 | 3.69e-01 | 76.7% | 60.7% |
| 4yarA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.60 | 42.0 | 3.64e-01 | 76.7% | 57.7% |
| 2bnmA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 43.0 | 3.69e-01 | 76.7% | 66.7% |
| 3s7iB01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 44.0 | 3.35e-01 | 80.8% | 40.5% |
| 3myxB01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 40.0 | 3.44e-01 | 71.2% | 54.9% |
| 4e9kA00 | 2.60.120.1350 | Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF4465 | 0.58 | 42.0 | 3.01e-01 | 78.1% | 90.8% |
| 4lejA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 43.0 | 3.32e-01 | 80.8% | 42.1% |
| 3ht1A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 39.0 | 3.24e-01 | 71.2% | 50.0% |
| 2wfpA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 40.0 | 3.63e-01 | 72.6% | 66.3% |
| 2o8qA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 38.0 | 3.31e-01 | 75.3% | 56.6% |
| 1pmiA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 40.0 | 3.07e-01 | 82.2% | 51.9% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3235765 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.66 | 45.0 | 4.14e-01 | 71.2% | 66.3% |
| 5058198 | 10.12.1.3 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 | 0.65 | 45.0 | 3.74e-01 | 71.2% | 56.0% |
| 3653641 | 10.12.1.3 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 | 0.65 | 49.0 | 3.31e-01 | 80.8% | 27.0% |
| 5073275 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.63 | 43.0 | 3.83e-01 | 71.2% | 68.6% |
| 4084375 | 10.12.1.3 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 | 0.63 | 48.0 | 3.50e-01 | 83.6% | 86.5% |
| 3810253 | 12.1.1.35 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Melibiase_C | 0.62 | 44.0 | 4.07e-01 | 74.0% | 87.4% |
| 3969691 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.62 | 48.0 | 3.77e-01 | 84.9% | 90.3% |
| 2625944 | 10.12.1.3 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 | 0.61 | 47.0 | 3.65e-01 | 83.6% | 81.6% |
| 2149183 | 10.12.1.50 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › HTH_26 | 0.61 | 52.0 | 3.84e-01 | 100.0% | 67.4% |
| 3974326 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.61 | 43.0 | 3.65e-01 | 75.3% | 56.8% |
| 2706546 | 10.32.1.16 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Clenterotox | 0.61 | 42.0 | 3.48e-01 | 72.6% | 62.7% |
| 2157748 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.60 | 43.0 | 3.47e-01 | 76.7% | 48.7% |
| 4567075 | 10.12.1.84 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › VKGC_lumenal_dom | 0.60 | 41.0 | 2.76e-01 | 71.2% | 25.3% |
| 3275342 | 10.12.1.28 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › HutD | 0.60 | 43.0 | 3.73e-01 | 76.7% | 67.0% |
| 4236729 | 10.12.1.33 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Ectoine_synth | 0.59 | 43.0 | 3.52e-01 | 76.7% | 52.6% |
| 4052150 | 10.12.1.33 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Ectoine_synth | 0.58 | 41.0 | 3.51e-01 | 75.3% | 57.6% |
| 3404684 | 10.12.1.84 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › VKGC_lumenal_dom | 0.58 | 45.0 | 3.28e-01 | 84.9% | 77.6% |
| 4588060 | 10.12.1.3 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 | 0.58 | 42.0 | 3.14e-01 | 80.8% | 34.9% |
| 4928418 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.58 | 40.0 | 3.68e-01 | 71.2% | 78.5% |
| 3671872 | 10.12.1.49 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_7 | 0.58 | 40.0 | 3.35e-01 | 72.6% | 51.5% |
| 181540 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.58 | 43.0 | 3.72e-01 | 83.6% | 92.1% |
| 3425621 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.58 | 40.0 | 3.26e-01 | 72.6% | 47.9% |
| 4028658 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.58 | 41.0 | 3.36e-01 | 76.7% | 50.3% |
| 3969011 | 10.12.1.27 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_3 | 0.57 | 39.0 | 3.42e-01 | 71.2% | 58.3% |
| 3400402 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.56 | 39.0 | 3.62e-01 | 74.0% | 97.0% |
| 3651227 | 10.12.1.3 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 | 0.56 | 47.0 | 3.46e-01 | 100.0% | 64.8% |
| 3948934 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.56 | 38.0 | 3.55e-01 | 72.6% | 68.0% |
| 4298480 | 10.12.1.3 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 | 0.56 | 51.0 | 3.51e-01 | 98.6% | 67.4% |
| 5040182 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.55 | 38.0 | 3.42e-01 | 74.0% | 87.3% |
| 4536849 | 10.12.1.146 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › HTH_3 | 0.54 | 42.0 | 2.73e-01 | 89.0% | 44.1% |
| 3585395 | 10.12.1.62 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PMI_typeI_cat | 0.54 | 40.0 | 3.26e-01 | 80.8% | 51.7% |
| 3836203 | 11.10.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 | 0.51 | 35.0 | 2.98e-01 | 74.0% | 88.6% |