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BML_08042016_6_5m_scaffold_18_prodigal-single.1__X__X__00108
Bact-VirBML_08042016_6_5m_scaffold_18_prodigal-single.1__X__X__00108
Identity
- Kingdom:
- phage
Quality
67.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 70-126
D2
medium
residues 1-69_129-175
Domain cluster:
rep: BML_08042016_6_5m_scaffold_18_prodigal-single.1__X__X__00045__D1-44_113-158
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vugA03 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.62 | 39.0 | 4.20e-01 | 100.0% | 72.5% |
| 6p0cA03 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.55 | 41.0 | 3.99e-01 | 100.0% | 70.6% |
| 2rdgA02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 32.0 | 3.89e-01 | 100.0% | 93.0% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4401143 | 207.6.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › HemolysinCabind | 0.55 | 32.0 | 2.43e-01 | 100.0% | 26.3% |
| 3969437 | 2.20.1.0 ↗ | beta barrels › OB-fold › NlpE C-terminal domain › NlpE C-terminal domain | 0.53 | 37.0 | 4.12e-01 | 100.0% | 91.1% |