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BML_08042016_6_5m_scaffold_18_prodigal-single.1__X__X__00149
Bact-VirBML_08042016_6_5m_scaffold_18_prodigal-single.1__X__X__00149
Identity
- Kingdom:
- phage
Quality
55.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 39-118
D2
high
residues 134-219
Domain cluster:
rep: LacPavin_0818_WC45_scaffold_160996_curated_closed_complete_prodigal-single.1__X__X__00528__D37-113
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2mysA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.85 | 44.0 | 5.82e-01 | 100.0% | 91.7% |
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.85 | 45.0 | 5.71e-01 | 100.0% | 86.5% |
| 2vb6A01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.79 | 44.0 | 5.42e-01 | 100.0% | 87.0% |
| 1y71A00 | 2.30.30.430 | Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain | 0.78 | 51.0 | 4.65e-01 | 100.0% | 52.3% |
| 3h8zA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 39.0 | 5.12e-01 | 96.5% | 89.6% |
| 5i4eA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.77 | 39.0 | 5.07e-01 | 96.5% | 91.3% |
| 3fb9B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 40.0 | 4.13e-01 | 100.0% | 67.9% |
| 1of5B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 37.0 | 3.25e-01 | 70.9% | 39.8% |
| 2kxcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.60 | 40.0 | 4.42e-01 | 100.0% | 86.6% |
| 1x6bA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 38.0 | 4.25e-01 | 100.0% | 87.5% |
| 3agjF01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.56 | 44.0 | 3.97e-01 | 100.0% | 60.6% |
| 1ksiA03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.51 | 37.0 | 2.37e-01 | 90.7% | 15.6% |
| 4c5eC02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 42.0 | 4.04e-01 | 100.0% | 79.2% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3450257 | 4.1.1.150 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3123 | 0.74 | 52.0 | 5.05e-01 | 100.0% | 66.3% |
| 3700770 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 44.0 | 5.23e-01 | 100.0% | 88.3% |
| 3241890 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 46.0 | 4.43e-01 | 100.0% | 58.0% |
| 3342793 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.68 | 48.0 | 3.64e-01 | 100.0% | 33.2% |
| 3357709 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.68 | 48.0 | 4.89e-01 | 100.0% | 74.1% |
| 4028711 | 884.1.1.0 ↗ | a+b two layers › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain | 0.64 | 38.0 | 3.69e-01 | 100.0% | 51.0% |
| 2321269 | 4.1.1.46 ↗ | beta barrels › SH3 › SH3 › SH3 › VEG | 0.62 | 40.0 | 4.13e-01 | 100.0% | 67.9% |
| 4069560 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 41.0 | 4.39e-01 | 100.0% | 80.0% |
| 4012002 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 40.0 | 4.38e-01 | 100.0% | 84.3% |
| 3645395 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.60 | 47.0 | 4.91e-01 | 100.0% | 88.7% |
| 3230400 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 40.0 | 4.52e-01 | 100.0% | 93.8% |
| 3342814 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.58 | 46.0 | 4.47e-01 | 100.0% | 75.8% |
| 3834112 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.57 | 45.0 | 4.72e-01 | 100.0% | 90.0% |
| 4932514 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.57 | 42.0 | 3.79e-01 | 100.0% | 56.7% |
| 3231154 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 45.0 | 4.68e-01 | 100.0% | 91.3% |
| 2552660 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.55 | 44.0 | 3.95e-01 | 100.0% | 60.6% |
| 3627567 | 883.1.1.15 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP+LBP_BPI_CETP_C | 0.55 | 45.0 | 2.96e-01 | 93.0% | 23.4% |
| 3720552 | 3794.1.1.0 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit | 0.53 | 34.0 | 2.51e-01 | 83.7% | 24.3% |
| 4155224 | 9.16.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein Atu4866 › Hypothetical protein Atu4866 › Rot1 | 0.53 | 46.0 | 3.83e-01 | 100.0% | 70.0% |
| 3704507 | 227.1.1.11 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 | 0.52 | 35.0 | 3.02e-01 | 100.0% | 43.2% |
| 373957 | 3091.1.1.1 ↗ | a+b complex topology › Myosin VI cargo binding domain › Myosin VI cargo binding domain › Myosin VI cargo binding domain › Myosin-VI_CBD | 0.51 | 41.0 | 3.69e-01 | 100.0% | 60.5% |
| 4137586 | 331.3.1.1 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Bet_v_1 | 0.51 | 39.0 | 3.23e-01 | 90.7% | 45.2% |