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BML_08042016_6_5m_scaffold_18_prodigal-single.1__X__X__00182
Bact-VirBML_08042016_6_5m_scaffold_18_prodigal-single.1__X__X__00182
Identity
- Kingdom:
- phage
Quality
86.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-63
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gumB03 | 2.30.29.100 | Mainly Beta › Roll › PH-domain like › | 0.69 | 61.0 | 4.83e-01 | 100.0% | 89.3% |
| 3goxA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 53.0 | 5.56e-01 | 96.6% | 100.0% |
| 4osnA00 | 2.30.29.100 | Mainly Beta › Roll › PH-domain like › | 0.67 | 59.0 | 4.83e-01 | 100.0% | 94.5% |
| 5yprA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 57.0 | 5.11e-01 | 98.3% | 85.5% |
| 1gcqB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.64 | 53.0 | 5.44e-01 | 93.2% | 98.2% |
| 4nswA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 54.0 | 4.53e-01 | 100.0% | 78.0% |
| 2pqhB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 53.0 | 5.21e-01 | 96.6% | 87.7% |
| 3pe0A03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.62 | 53.0 | 5.23e-01 | 100.0% | 90.6% |
| 2ekhA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.62 | 53.0 | 4.87e-01 | 98.3% | 73.8% |
| 2dmoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.62 | 52.0 | 5.06e-01 | 96.6% | 85.3% |
| 2m6nA00 | 2.20.25.20 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.61 | 39.0 | 4.27e-01 | 86.4% | 82.6% |
| 6uzjA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 52.0 | 5.15e-01 | 100.0% | 98.4% |
| 4chjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 51.0 | 4.12e-01 | 98.3% | 65.3% |
| 2rovA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 52.0 | 4.24e-01 | 100.0% | 90.6% |
| 1z87A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 52.0 | 4.44e-01 | 100.0% | 79.0% |
| 5o99A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.60 | 50.0 | 5.04e-01 | 94.9% | 93.3% |
| 3wyfE00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 50.0 | 3.88e-01 | 100.0% | 64.1% |
| 1pxfA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 51.0 | 4.10e-01 | 100.0% | 87.4% |
| 2djhA00 | 3.30.2310.30 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › Colicin E5 C-terminal ribonuclease domain (CRD) | 0.55 | 46.0 | 4.04e-01 | 100.0% | 68.8% |
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 46.0 | 4.43e-01 | 100.0% | 87.5% |
| 6v55A02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 46.0 | 3.33e-01 | 100.0% | 67.2% |
| 2l89A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 46.0 | 3.90e-01 | 100.0% | 55.6% |
| 3isrA01 | 3.10.620.30 | Alpha Beta › Roll › C8orf32 fold › | 0.54 | 41.0 | 3.00e-01 | 100.0% | 27.6% |
| 3kyaA02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.54 | 42.0 | 2.66e-01 | 89.8% | 56.1% |
| 3zypA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 45.0 | 3.17e-01 | 100.0% | 66.8% |
| 2wdtC02 | 3.30.1490.420 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ubiquitin carboxyl-terminal hydrolase, domain 2 | 0.54 | 44.0 | 3.82e-01 | 98.3% | 74.3% |
| 4hwxA00 | 3.30.350.10 | Alpha Beta › 2-Layer Sandwich › Subtilisin Inhibitor › Subtilisin inhibitor-like | 0.54 | 46.0 | 3.78e-01 | 98.3% | 79.8% |
| 4msxA02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.53 | 44.0 | 2.91e-01 | 100.0% | 94.4% |
| 4r8tB02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.53 | 42.0 | 3.94e-01 | 100.0% | 69.9% |
| 1w4tA02 | 2.40.128.150 | Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases | 0.53 | 43.0 | 3.83e-01 | 100.0% | 99.0% |
| 4eqvA02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.53 | 43.0 | 3.25e-01 | 100.0% | 97.2% |
| 1yzbA01 | 3.90.70.40 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.53 | 44.0 | 3.58e-01 | 100.0% | 77.4% |
| 5cvmA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.52 | 42.0 | 2.78e-01 | 100.0% | 91.2% |
| 5chtB00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.50 | 44.0 | 2.81e-01 | 100.0% | 34.7% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3471347 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.72 | 64.0 | 5.12e-01 | 100.0% | 79.1% |
| 3479736 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.69 | 60.0 | 4.94e-01 | 100.0% | 79.8% |
| 4478971 | 4.1.1.174 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF951 | 0.68 | 56.0 | 5.52e-01 | 100.0% | 86.2% |
| 3484478 | 4.1.1.99 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_10 | 0.67 | 53.0 | 5.33e-01 | 98.3% | 86.7% |
| 3248060 | 220.1.1.132 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C | 0.67 | 58.0 | 4.78e-01 | 100.0% | 72.7% |
| 3564088 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.66 | 56.0 | 4.69e-01 | 100.0% | 81.8% |
| 3213121 | 4184.1.1.0 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat | 0.66 | 52.0 | 4.83e-01 | 100.0% | 68.0% |
| 3408236 | 220.1.1.7 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS | 0.65 | 55.0 | 4.43e-01 | 100.0% | 64.8% |
| 3178261 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.64 | 56.0 | 4.43e-01 | 100.0% | 66.4% |
| 3247824 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.63 | 55.0 | 4.61e-01 | 100.0% | 72.4% |
| 3505725 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 50.0 | 5.13e-01 | 96.6% | 94.5% |
| 3290662 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.62 | 47.0 | 3.73e-01 | 100.0% | 38.5% |
| 3432877 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 54.0 | 5.31e-01 | 100.0% | 92.3% |
| 3453949 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.62 | 55.0 | 3.42e-01 | 100.0% | 86.6% |
| 3609378 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.61 | 51.0 | 4.49e-01 | 100.0% | 88.4% |
| 3199835 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.60 | 51.0 | 4.78e-01 | 100.0% | 92.0% |
| 2700914 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.60 | 45.0 | 4.16e-01 | 98.3% | 62.5% |
| 3270639 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.59 | 50.0 | 4.18e-01 | 100.0% | 82.7% |
| 3478678 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 49.0 | 4.65e-01 | 100.0% | 96.0% |
| 3377025 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.59 | 51.0 | 3.18e-01 | 100.0% | 90.0% |
| 3809821 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.59 | 51.0 | 3.17e-01 | 100.0% | 89.2% |
| 3516333 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 44.0 | 4.52e-01 | 100.0% | 90.9% |
| 3941320 | 4.1.1.303 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus | 0.58 | 45.0 | 4.21e-01 | 100.0% | 68.0% |
| 3972374 | 219.1.1.96 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_i_TM | 0.57 | 46.0 | 3.66e-01 | 100.0% | 43.2% |
| 4139778 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.56 | 44.0 | 4.27e-01 | 100.0% | 78.1% |
| 3817230 | 219.1.1.14 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Josephin | 0.56 | 48.0 | 3.47e-01 | 100.0% | 80.0% |
| 5083781 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.56 | 47.0 | 3.53e-01 | 100.0% | 57.1% |
| 3404595 | 219.1.1.14 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Josephin | 0.55 | 46.0 | 3.40e-01 | 100.0% | 78.9% |
| 4024974 | 219.1.1.14 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Josephin | 0.55 | 47.0 | 3.35e-01 | 100.0% | 83.4% |
| 3880439 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.55 | 46.0 | 2.74e-01 | 100.0% | 83.6% |
| 3920985 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.55 | 46.0 | 2.86e-01 | 100.0% | 85.5% |
| 3576490 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 46.0 | 2.59e-01 | 100.0% | 37.2% |
| 4951840 | 218.4.1.0 ↗ | a+b two layers › Enolase-N/ribosomal protein › Dhaf4260 N-terminal domain › Dhaf4260 N-terminal domain | 0.54 | 39.0 | 3.35e-01 | 78.0% | 81.0% |
| 3246511 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.54 | 45.0 | 2.87e-01 | 100.0% | 90.3% |
| 3602976 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 38.0 | 3.95e-01 | 78.0% | 100.0% |
| 4155213 | 219.1.1.50 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH_1 | 0.53 | 44.0 | 2.70e-01 | 100.0% | 63.0% |
| 3708813 | 5.1.4.167 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR19_1st | 0.53 | 43.0 | 2.70e-01 | 94.9% | 26.8% |
| 3614286 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.53 | 46.0 | 2.87e-01 | 100.0% | 90.0% |
| 3801207 | 219.1.1.50 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH_1 | 0.53 | 43.0 | 2.68e-01 | 100.0% | 64.9% |
| 3841970 | 6043.1.1.4 ↗ | a+b two layers › yfeY-like › yfeY-like › yfeY-like › PHAF1 | 0.53 | 37.0 | 3.43e-01 | 78.0% | 54.8% |
| 3660442 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.53 | 44.0 | 2.84e-01 | 100.0% | 96.5% |
| 3586488 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.52 | 43.0 | 2.71e-01 | 98.3% | 92.5% |
| 3912023 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.52 | 43.0 | 2.82e-01 | 100.0% | 90.0% |
| 3182704 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.52 | 43.0 | 2.49e-01 | 100.0% | 55.0% |
| 3730941 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.52 | 43.0 | 2.71e-01 | 100.0% | 86.0% |
| 4100425 | 11.1.4.90 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › DUF4550 | 0.50 | 43.0 | 3.42e-01 | 100.0% | 62.3% |
| 3878495 | 633.23.1.1 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin | 0.50 | 42.0 | 2.96e-01 | 100.0% | 67.4% |