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BML_08042016_6_5m_scaffold_2_prodigal-single.1__X__X__00118
Bact-VirBML_08042016_6_5m_scaffold_2_prodigal-single.1__X__X__00118
Identity
- Kingdom:
- phage
Quality
56.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 350-443
Domain cluster:
rep: OV032902.1__CAH0447963.1__SM033_00139__00139__D168-264
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6o38A04 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.80 | 68.0 | 6.98e-01 | 100.0% | 94.4% |
| 6o38A01 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 66.0 | 6.72e-01 | 100.0% | 98.9% |
| 6o38A03 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 61.0 | 6.43e-01 | 95.7% | 100.0% |
| 6o38A02 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 64.0 | 6.50e-01 | 98.9% | 96.7% |
| 1hf2A02 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.66 | 51.0 | 4.93e-01 | 100.0% | 74.5% |
| 5tk2B00 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.59 | 39.0 | 4.07e-01 | 78.7% | 72.7% |
| 3axsA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 49.0 | 3.44e-01 | 100.0% | 70.8% |
| 1wz8A01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.55 | 44.0 | 3.51e-01 | 89.4% | 87.9% |
| 2vpvA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 43.0 | 4.32e-01 | 97.9% | 89.4% |
| 5jgjA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 44.0 | 3.33e-01 | 90.4% | 88.9% |
| 1vq8O00 | 3.100.10.10 | Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › | 0.52 | 35.0 | 3.35e-01 | 76.6% | 57.4% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2581339 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.75 | 65.0 | 6.56e-01 | 100.0% | 94.7% |
| 2581337 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.74 | 66.0 | 6.70e-01 | 100.0% | 97.8% |
| 3289663 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.68 | 60.0 | 4.66e-01 | 100.0% | 67.8% |
| 7233 | 207.5.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C | 0.65 | 50.0 | 4.86e-01 | 100.0% | 73.8% |
| 4540273 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.65 | 57.0 | 4.29e-01 | 100.0% | 62.9% |
| 2156967 | 207.5.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C | 0.64 | 52.0 | 4.94e-01 | 100.0% | 75.7% |
| 4493843 | 207.5.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C | 0.63 | 51.0 | 4.92e-01 | 100.0% | 79.0% |
| 3963299 | 207.5.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C | 0.62 | 51.0 | 4.84e-01 | 100.0% | 76.4% |
| 4562874 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.62 | 53.0 | 4.00e-01 | 100.0% | 71.4% |
| 4012012 | 207.4.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like | 0.60 | 48.0 | 4.78e-01 | 100.0% | 82.0% |
| 4041561 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.59 | 51.0 | 3.84e-01 | 100.0% | 73.3% |
| 3891591 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.57 | 50.0 | 4.67e-01 | 97.9% | 91.7% |
| 4941490 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.56 | 47.0 | 4.22e-01 | 93.6% | 73.3% |
| 3484290 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 49.0 | 4.16e-01 | 97.9% | 74.2% |
| 3935857 | 3156.1.1.0 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related | 0.54 | 41.0 | 3.31e-01 | 84.0% | 77.0% |
| 3485798 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 45.0 | 3.89e-01 | 96.8% | 74.7% |
D2
medium
residues 1-83