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BML_08042016_6_5m_scaffold_2_prodigal-single.1__X__X__00137
Bact-VirBML_08042016_6_5m_scaffold_2_prodigal-single.1__X__X__00137
Identity
- Kingdom:
- phage
Quality
91.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-104
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07603.18 best | Lcl_C | 50.0 | 4.80e-13 | 98.8% | 82.0% |
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1v7pB00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.82 | 77.0 | 6.59e-01 | 100.0% | 85.8% |
| 1fvuB00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.82 | 76.0 | 6.63e-01 | 100.0% | 86.8% |
| 4uwwA00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.81 | 75.0 | 6.39e-01 | 100.0% | 86.9% |
| 1gz2A00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.80 | 74.0 | 6.19e-01 | 100.0% | 88.5% |
| 1sb2B00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.80 | 75.0 | 6.46e-01 | 100.0% | 84.7% |
| 1eslA00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.80 | 75.0 | 5.94e-01 | 100.0% | 73.9% |
| 1egiA00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.79 | 74.0 | 6.30e-01 | 100.0% | 89.1% |
| 1jznA00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.79 | 74.0 | 6.17e-01 | 100.0% | 86.7% |
| 7jptA03 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.78 | 73.0 | 6.28e-01 | 100.0% | 96.0% |
| 1c3aA00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.78 | 72.0 | 6.05e-01 | 100.0% | 85.2% |
| 1rjhA00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.75 | 69.0 | 6.10e-01 | 100.0% | 98.3% |
| 3fd4A00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.73 | 66.0 | 5.53e-01 | 100.0% | 72.9% |
| 2ci8A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.62 | 40.0 | 4.63e-01 | 86.9% | 100.0% |
| 1nrvA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.58 | 46.0 | 4.37e-01 | 88.1% | 100.0% |
| 2do3A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 34.0 | 4.18e-01 | 83.3% | 98.0% |
| 4ytlA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 34.0 | 4.15e-01 | 86.9% | 100.0% |
| 1d4tA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.56 | 44.0 | 4.13e-01 | 85.7% | 100.0% |
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.56 | 34.0 | 4.11e-01 | 95.2% | 98.1% |
| 1igqB00 | 2.30.30.150 | Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain | 0.55 | 37.0 | 4.24e-01 | 79.8% | 100.0% |
| 1mhnA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 36.0 | 4.17e-01 | 86.9% | 94.9% |
| 5i4eA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.55 | 31.0 | 3.95e-01 | 89.3% | 100.0% |
| 4m4zA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 31.0 | 3.86e-01 | 90.5% | 100.0% |
| 1g5hB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.54 | 45.0 | 4.20e-01 | 92.9% | 88.8% |
| 4s1hA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.53 | 43.0 | 3.08e-01 | 92.9% | 38.7% |
| 1nj1A02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.53 | 44.0 | 4.15e-01 | 92.9% | 92.3% |
| 3zuaA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.53 | 43.0 | 3.73e-01 | 100.0% | 57.3% |
| 6bogA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 33.0 | 3.87e-01 | 85.7% | 100.0% |
| 1khcA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 37.0 | 4.10e-01 | 86.9% | 93.8% |
| 1h7sA01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.52 | 44.0 | 3.40e-01 | 94.0% | 55.4% |
| 4wi1A02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.52 | 43.0 | 3.86e-01 | 92.9% | 78.9% |
| 7u32F02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.52 | 31.0 | 3.80e-01 | 92.9% | 98.0% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 35.0 | 3.69e-01 | 92.9% | 79.5% |
| 2i4lB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.51 | 42.0 | 4.05e-01 | 92.9% | 91.1% |
| 3netB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.51 | 42.0 | 4.07e-01 | 92.9% | 91.8% |
| 2j3lA01 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.51 | 42.0 | 3.85e-01 | 91.7% | 80.5% |
| 2eqkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 37.0 | 3.93e-01 | 92.9% | 87.7% |
| 2ckkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 32.0 | 3.77e-01 | 70.2% | 100.0% |
| 6s8zA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 35.0 | 3.95e-01 | 89.3% | 100.0% |
ECOD (65)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5080286 | 209.1.1.25 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lcl_C | 0.90 | 85.0 | 7.13e-01 | 98.8% | 71.5% |
| 4532283 | 209.1.1.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like | 0.89 | 85.0 | 7.74e-01 | 100.0% | 93.3% |
| 2080140 | 209.1.2.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › Sulfatase-modifying factor-like › FGE-sulfatase | 0.85 | 78.0 | 4.96e-01 | 100.0% | 80.6% |
| 4102050 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.84 | 78.0 | 6.99e-01 | 98.8% | 74.5% |
| 3976043 | 209.1.1.6 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › InvE_AD | 0.84 | 79.0 | 6.55e-01 | 98.8% | 78.5% |
| 3980715 | 209.1.1.6 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › InvE_AD | 0.83 | 78.0 | 6.39e-01 | 100.0% | 77.9% |
| 3908631 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.83 | 77.0 | 6.45e-01 | 100.0% | 87.4% |
| 4589054 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.82 | 77.0 | 6.83e-01 | 100.0% | 77.4% |
| 4468964 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.82 | 77.0 | 6.45e-01 | 100.0% | 81.3% |
| None | — | 0.82 | 76.0 | 6.90e-01 | 100.0% | 78.2% | |
| 2066820 | 209.1.1.6 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › InvE_AD | 0.82 | 76.0 | 6.38e-01 | 98.8% | 79.7% |
| 3878326 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.81 | 77.0 | 6.02e-01 | 100.0% | 73.1% |
| 3997876 | 209.1.1.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like | 0.81 | 75.0 | 6.33e-01 | 100.0% | 86.7% |
| 3768432 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.81 | 76.0 | 5.76e-01 | 100.0% | 63.3% |
| 3226269 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.81 | 75.0 | 6.31e-01 | 100.0% | 82.2% |
| 3554247 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.81 | 75.0 | 6.08e-01 | 100.0% | 76.7% |
| 3215762 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.81 | 74.0 | 6.26e-01 | 100.0% | 91.9% |
| 2884722 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.80 | 75.0 | 6.13e-01 | 100.0% | 80.0% |
| 7333 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.80 | 74.0 | 6.19e-01 | 100.0% | 88.5% |
| 3919376 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.80 | 75.0 | 5.75e-01 | 100.0% | 68.6% |
| 3399879 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.80 | 75.0 | 6.03e-01 | 100.0% | 82.7% |
| 4563435 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.80 | 74.0 | 6.12e-01 | 100.0% | 83.6% |
| 3924892 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.80 | 74.0 | 6.48e-01 | 100.0% | 94.2% |
| 4160139 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.80 | 74.0 | 6.08e-01 | 100.0% | 81.2% |
| 3228785 | 209.1.1.14 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › PF29411 | 0.79 | 74.0 | 5.67e-01 | 100.0% | 86.9% |
| 3477067 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.79 | 73.0 | 5.95e-01 | 100.0% | 76.0% |
| 3581508 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.79 | 74.0 | 6.02e-01 | 100.0% | 71.0% |
| 4509230 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.79 | 73.0 | 6.21e-01 | 100.0% | 88.5% |
| 3245408 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.79 | 73.0 | 5.98e-01 | 100.0% | 80.7% |
| 3622310 | 209.1.1.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like | 0.78 | 73.0 | 6.19e-01 | 100.0% | 83.8% |
| 3412732 | 209.1.1.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like | 0.77 | 71.0 | 5.82e-01 | 100.0% | 82.8% |
| 4490202 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.76 | 68.0 | 5.68e-01 | 95.2% | 82.2% |
| 3871379 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.76 | 70.0 | 5.49e-01 | 100.0% | 68.5% |
| 3922342 | 209.1.1.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like | 0.72 | 66.0 | 5.65e-01 | 100.0% | 81.5% |
| 5033075 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 39.0 | 4.59e-01 | 89.3% | 96.4% |
| 547 | 4.1.1.49 ↗ | beta barrels › SH3 › SH3 › SH3 › KorB_C | 0.60 | 37.0 | 4.41e-01 | 75.0% | 96.3% |
| 3581143 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.60 | 37.0 | 4.13e-01 | 84.5% | 80.0% |
| 4962338 | 375.1.1.234 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_PaaD | 0.59 | 29.0 | 4.15e-01 | 84.5% | 100.0% |
| 3480822 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 34.0 | 4.24e-01 | 78.6% | 98.0% |
| 3501699 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 40.0 | 4.12e-01 | 91.7% | 75.0% |
| 3340900 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 38.0 | 4.24e-01 | 90.5% | 86.2% |
| 3577505 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 39.0 | 3.96e-01 | 92.9% | 70.6% |
| 3391556 | 4.1.1.384 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_krimper_1st | 0.56 | 39.0 | 3.61e-01 | 94.0% | 57.1% |
| 3913334 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 38.0 | 4.08e-01 | 91.7% | 82.9% |
| 3398093 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.55 | 36.0 | 4.16e-01 | 88.1% | 93.3% |
| 4524466 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.55 | 36.0 | 3.96e-01 | 89.3% | 81.4% |
| 4075769 | 4.1.1.154 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4772 | 0.55 | 35.0 | 4.11e-01 | 86.9% | 98.2% |
| 3577224 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.55 | 37.0 | 3.65e-01 | 90.5% | 64.4% |
| 4470603 | 4.1.1.217 ↗ | beta barrels › SH3 › SH3 › SH3 › zf-CCCH_4 | 0.55 | 38.0 | 3.03e-01 | 92.9% | 36.4% |
| 3881123 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.54 | 36.0 | 3.67e-01 | 91.7% | 69.4% |
| 4420173 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.53 | 36.0 | 3.81e-01 | 89.3% | 77.3% |
| 3910433 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 37.0 | 4.09e-01 | 88.1% | 93.8% |
| 4058174 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.53 | 37.0 | 4.11e-01 | 96.4% | 96.9% |
| 3695780 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.52 | 36.0 | 3.66e-01 | 70.2% | 85.0% |
| 3535190 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.52 | 38.0 | 3.72e-01 | 92.9% | 71.1% |
| 3883161 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.52 | 38.0 | 3.73e-01 | 92.9% | 72.2% |
| 3393347 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.52 | 37.0 | 3.70e-01 | 91.7% | 71.1% |
| 3267329 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 37.0 | 3.30e-01 | 95.2% | 51.2% |
| 3233511 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.51 | 32.0 | 3.87e-01 | 90.5% | 98.2% |
| 3571064 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.51 | 38.0 | 3.85e-01 | 92.9% | 78.8% |
| 3627842 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 37.0 | 3.67e-01 | 92.9% | 71.1% |
| 3405627 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 40.0 | 3.84e-01 | 84.5% | 83.2% |
| 4026282 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.51 | 36.0 | 3.55e-01 | 91.7% | 68.9% |
| 3997949 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.50 | 37.0 | 3.65e-01 | 92.9% | 73.3% |
| 3629830 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.50 | 39.0 | 3.95e-01 | 97.6% | 83.5% |