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BML_08042016_6_5m_scaffold_2_prodigal-single.1__X__X__00213
Bact-VirBML_08042016_6_5m_scaffold_2_prodigal-single.1__X__X__00213
Identity
- Kingdom:
- phage
Quality
87.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-90_612-681
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zkiA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.55 | 34.0 | 3.68e-01 | 85.5% | 72.8% |
| 1xf1A03 | 2.60.40.1710 | Mainly Beta › Sandwich › Immunoglobulin-like › Subtilisin-like superfamily | 0.55 | 37.0 | 3.99e-01 | 92.1% | 80.2% |
| 2gx9A00 | 3.30.420.330 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Influenza virus non-structural protein, effector domain | 0.54 | 29.0 | 3.14e-01 | 98.7% | 59.5% |
| 3e29B00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 34.0 | 3.59e-01 | 86.2% | 71.6% |
| 5d2lE01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 32.0 | 3.65e-01 | 91.4% | 83.3% |
| 4oocA00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.52 | 41.0 | 3.43e-01 | 82.9% | 71.6% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4961279 | 310.3.1.27 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › PF26272 | 0.55 | 31.0 | 3.90e-01 | 90.8% | 93.3% |
| 1883337 | 4258.1.1.2 ↗ | mixed a+b and a/b › Ns1 effector domain-like › Ns1 effector domain-like › Ns1 effector domain-like › Flu_B_NS1 | 0.51 | 28.0 | 2.95e-01 | 99.3% | 58.4% |
| 2831758 | 2.21.1.1 ↗ | beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › SmpB | 0.51 | 31.0 | 3.16e-01 | 100.0% | 60.9% |
| 3729803 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.50 | 41.0 | 3.92e-01 | 88.2% | 96.8% |
| 3742330 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.50 | 24.0 | 2.73e-01 | 100.0% | 57.4% |
D2
high
residues 100-221
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fx0B01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.71 | 44.0 | 5.27e-01 | 82.8% | 96.2% |
| 4tkoB01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.65 | 46.0 | 5.20e-01 | 86.9% | 97.8% |
| 2gk6A02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.64 | 43.0 | 5.04e-01 | 82.0% | 100.0% |
| 4yhbA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.64 | 50.0 | 4.96e-01 | 85.2% | 93.8% |
| 2qggA01 | 2.40.30.60 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM | 0.63 | 44.0 | 4.99e-01 | 100.0% | 95.7% |
| 1ylnA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.59 | 41.0 | 4.21e-01 | 75.4% | 74.6% |
| 1e62A01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.59 | 47.0 | 4.66e-01 | 85.2% | 97.7% |
| 1tvgA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 38.0 | 3.68e-01 | 86.9% | 57.4% |
| 4ojdH03 | 2.60.40.3980 | Mainly Beta › Sandwich › Immunoglobulin-like › Cell-cell fusogen EFF/AFF, domain 3 | 0.58 | 39.0 | 4.18e-01 | 85.2% | 80.8% |
| 4rdlA02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.58 | 45.0 | 4.83e-01 | 83.6% | 97.2% |
| 4kktA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.57 | 44.0 | 4.69e-01 | 100.0% | 94.3% |
| 6j0qA02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.57 | 45.0 | 4.72e-01 | 83.6% | 97.2% |
| 1cqxA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.56 | 45.0 | 4.75e-01 | 87.7% | 95.5% |
| 2wzpR01 | 2.30.300.20 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Phage tail base-plate attachment protein, domain D1/D2 | 0.56 | 42.0 | 3.54e-01 | 77.9% | 76.0% |
| 6pogA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 36.0 | 3.91e-01 | 86.1% | 78.2% |
| 3rj2X00 | 2.60.120.1150 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 34.0 | 3.37e-01 | 83.6% | 54.9% |
| 1qg3A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 38.0 | 4.03e-01 | 85.2% | 80.8% |
| 1wfoA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 36.0 | 3.87e-01 | 84.4% | 76.0% |
| 1x5aA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 33.0 | 3.76e-01 | 86.9% | 79.1% |
| 1ueyA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 36.0 | 3.63e-01 | 86.1% | 63.8% |
| 1x5xA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 37.0 | 3.92e-01 | 97.5% | 77.1% |
| 7uwjC02 | 2.60.40.2150 | Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 2 | 0.54 | 36.0 | 3.93e-01 | 86.9% | 83.5% |
| 3nngA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 38.0 | 3.56e-01 | 86.9% | 57.5% |
| 1k3iA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 36.0 | 3.39e-01 | 86.9% | 53.9% |
| 4kx7A01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.54 | 37.0 | 3.13e-01 | 87.7% | 40.2% |
| 4dohB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 36.0 | 3.80e-01 | 86.1% | 79.0% |
| 5jtwA05 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.52 | 34.0 | 3.44e-01 | 86.1% | 66.1% |
| 4mbrA02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 41.0 | 3.73e-01 | 87.7% | 63.9% |
| 1k12A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 35.0 | 3.24e-01 | 86.9% | 53.8% |
| 2v5yA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 34.0 | 3.68e-01 | 86.1% | 84.3% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3332862 | 1.1.7.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › E1_FCCH | 0.72 | 48.0 | 5.38e-01 | 86.1% | 87.4% |
| 3759036 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.66 | 49.0 | 5.48e-01 | 84.4% | 98.9% |
| 4255584 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.65 | 49.0 | 5.33e-01 | 100.0% | 95.0% |
| 4120682 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.65 | 48.0 | 5.21e-01 | 99.2% | 94.0% |
| 4636051 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.64 | 49.0 | 5.19e-01 | 99.2% | 93.3% |
| 3931783 | 1.1.7.41 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom | 0.63 | 47.0 | 5.23e-01 | 84.4% | 100.0% |
| 3728657 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.63 | 45.0 | 5.11e-01 | 79.5% | 100.0% |
| 3387535 | 1.1.7.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ribosomal_L3 | 0.62 | 49.0 | 4.17e-01 | 82.8% | 100.0% |
| 3944005 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.62 | 45.0 | 4.45e-01 | 88.5% | 70.7% |
| 4864011 | 1.1.7.41 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom | 0.61 | 45.0 | 4.82e-01 | 86.9% | 89.5% |
| 3384073 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.60 | 48.0 | 4.91e-01 | 86.1% | 99.2% |
| 3267872 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.60 | 49.0 | 4.82e-01 | 100.0% | 82.3% |
| 4492958 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.60 | 46.0 | 4.95e-01 | 86.9% | 96.2% |
| 2455725 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.59 | 45.0 | 4.76e-01 | 86.9% | 92.4% |
| 4995896 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.59 | 51.0 | 5.00e-01 | 100.0% | 87.7% |
| 4316037 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.58 | 42.0 | 4.44e-01 | 80.3% | 84.5% |
| 4400928 | 1.1.7.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase | 0.58 | 42.0 | 4.24e-01 | 87.7% | 74.4% |
| 4181458 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.57 | 46.0 | 4.81e-01 | 86.9% | 98.2% |
| 3409825 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.57 | 44.0 | 4.50e-01 | 85.2% | 85.0% |
| 3751462 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.57 | 46.0 | 4.57e-01 | 88.5% | 92.3% |
| 3514259 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.55 | 37.0 | 3.85e-01 | 86.1% | 72.2% |
| 3187684 | 1.1.7.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1 | 0.55 | 48.0 | 4.59e-01 | 95.9% | 97.9% |
| 3788350 | 1.1.7.99 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1, FAD_binding_6 | 0.55 | 48.0 | 4.58e-01 | 94.3% | 99.3% |
| 3560235 | 2004.1.1.184 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 | 0.55 | 50.0 | 3.30e-01 | 99.2% | 30.7% |
| 4091836 | 1.1.7.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1 | 0.55 | 46.0 | 4.47e-01 | 91.8% | 85.9% |
| 3408777 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.54 | 35.0 | 3.85e-01 | 83.6% | 83.2% |
| 140303 | 10.32.1.2 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C | 0.54 | 38.0 | 3.59e-01 | 88.5% | 57.9% |
| 3727387 | 1.1.7.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1 | 0.54 | 46.0 | 4.16e-01 | 95.1% | 95.4% |
| 4016558 | 1.1.7.46 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SMUBP-2_HCS1_1B | 0.54 | 48.0 | 4.58e-01 | 99.2% | 99.3% |
| 3473056 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.54 | 35.0 | 3.72e-01 | 84.4% | 73.6% |
| 3574456 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.54 | 35.0 | 3.71e-01 | 84.4% | 76.2% |
| 4038585 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.53 | 36.0 | 3.54e-01 | 85.2% | 63.0% |
| 3478313 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.52 | 40.0 | 3.61e-01 | 86.1% | 59.4% |
| 4284307 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 34.0 | 3.66e-01 | 86.1% | 81.0% |
| 3958974 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.51 | 46.0 | 4.39e-01 | 98.4% | 87.9% |
| 3884004 | 11.1.1.1016 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF30511 | 0.50 | 34.0 | 3.58e-01 | 85.2% | 79.0% |
D3
high
residues 242-390_583-606
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5amhA00 | 2.170.150.20 | Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › Peptide methionine sulfoxide reductase. | 0.65 | 34.0 | 4.30e-01 | 97.1% | 83.0% |
| 5eh1A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 27.0 | 3.53e-01 | 100.0% | 71.6% |
| 4g5aA00 | 2.60.40.3080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 26.0 | 3.33e-01 | 100.0% | 64.6% |
| 5e53A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 28.0 | 3.59e-01 | 100.0% | 78.5% |
| 8os3A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 27.0 | 3.47e-01 | 100.0% | 77.2% |
| 2b5iB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 25.0 | 3.29e-01 | 100.0% | 71.3% |
| 2cuiA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 27.0 | 3.23e-01 | 100.0% | 67.0% |
| 1si5H01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.54 | 27.0 | 3.16e-01 | 72.8% | 63.9% |
| 1x4yA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 27.0 | 3.35e-01 | 100.0% | 77.2% |
| 1xqbA01 | 2.40.30.70 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like | 0.54 | 29.0 | 3.51e-01 | 100.0% | 79.8% |
| 6k2lA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 32.0 | 3.85e-01 | 100.0% | 90.1% |
| 2yeqA01 | 2.60.40.380 | Mainly Beta › Sandwich › Immunoglobulin-like › Purple acid phosphatase-like, N-terminal | 0.53 | 28.0 | 3.36e-01 | 100.0% | 76.1% |
| 3zugB02 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.52 | 29.0 | 3.19e-01 | 100.0% | 64.1% |
| 1iz6A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 22.0 | 3.14e-01 | 72.3% | 94.2% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3958308 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 29.0 | 3.57e-01 | 100.0% | 79.0% |
| 3392553 | 11.1.1.673 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CUT_N | 0.55 | 27.0 | 3.25e-01 | 100.0% | 68.2% |
| 3579994 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 30.0 | 3.44e-01 | 100.0% | 74.2% |
| 3869065 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.53 | 22.0 | 2.79e-01 | 100.0% | 62.0% |
| 4335022 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 22.0 | 2.76e-01 | 100.0% | 63.2% |
| 3439920 | 4.1.1.336 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7699 | 0.51 | 24.0 | 2.65e-01 | 100.0% | 51.0% |
| 4931072 | 4.1.1.139 ↗ | beta barrels › SH3 › SH3 › SH3 › IF5A-like_N | 0.51 | 22.0 | 3.16e-01 | 72.3% | 92.9% |
D4
high
residues 400-580
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1cd9D01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 27.0 | 3.48e-01 | 93.9% | 59.8% |
| 3fbkA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.62 | 37.0 | 4.18e-01 | 96.1% | 76.8% |
| 2q7nA05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 32.0 | 4.22e-01 | 81.2% | 94.9% |
| 1l9nA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 35.0 | 4.34e-01 | 81.2% | 94.7% |
| 3ufiA02 | 2.60.40.2630 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 36.0 | 4.26e-01 | 95.6% | 89.6% |
| 2cuiA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 31.0 | 3.82e-01 | 82.3% | 83.9% |
| 2kutA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 30.0 | 3.79e-01 | 79.6% | 85.8% |
| 1qunI01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 34.0 | 4.20e-01 | 82.9% | 97.4% |
| 4h3wA01 | 2.60.290.20 | Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › Protein of unknown function (DUF4621), C-terminal domain | 0.55 | 31.0 | 3.71e-01 | 81.2% | 80.8% |
| 3hr6A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 38.0 | 4.27e-01 | 94.5% | 94.7% |
| 4ojdH03 | 2.60.40.3980 | Mainly Beta › Sandwich › Immunoglobulin-like › Cell-cell fusogen EFF/AFF, domain 3 | 0.54 | 30.0 | 3.84e-01 | 84.5% | 92.3% |
| 5u8rA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 31.0 | 3.91e-01 | 83.4% | 94.4% |
| 7clyA01 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.54 | 37.0 | 3.84e-01 | 97.2% | 72.7% |
| 5mw5A01 | 2.60.40.3510 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 38.0 | 4.07e-01 | 95.6% | 88.7% |
| 1vcaA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 30.0 | 3.79e-01 | 81.8% | 93.6% |
| 3f65G01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 31.0 | 3.95e-01 | 85.6% | 100.0% |
| 3es6B00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 31.0 | 3.80e-01 | 81.8% | 92.4% |
| 7alkA01 | 2.60.40.3510 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 38.0 | 4.01e-01 | 94.5% | 88.7% |
| 3hlkA01 | 2.60.40.2240 | Mainly Beta › Sandwich › Immunoglobulin-like › Acyl-CoA thioester hydrolase/BAAT N-terminal domain | 0.50 | 34.0 | 3.90e-01 | 79.6% | 92.6% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5051830 | 11.1.1.236 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Mannosidase_ig | 0.65 | 33.0 | 4.28e-01 | 86.7% | 88.4% |
| 3175186 | 11.2.1.17 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › NT-C2 | 0.62 | 39.0 | 4.32e-01 | 95.6% | 78.3% |
| 3931538 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 34.0 | 4.38e-01 | 80.1% | 93.3% |
| 4932870 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.60 | 28.0 | 3.95e-01 | 82.9% | 95.0% |
| 3613471 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 31.0 | 3.92e-01 | 94.5% | 83.8% |
| 5016530 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 33.0 | 4.35e-01 | 82.9% | 99.0% |
| 3685844 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.58 | 35.0 | 3.90e-01 | 95.6% | 74.3% |
| 3515663 | 11.2.1.12 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DOCK-C2 | 0.58 | 43.0 | 3.92e-01 | 99.4% | 57.9% |
| 1082799 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.58 | 34.0 | 3.56e-01 | 79.6% | 61.6% |
| 3896286 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.57 | 31.0 | 4.01e-01 | 81.8% | 91.4% |
| 999477 | 11.1.4.22 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Mfa_like_1 | 0.56 | 35.0 | 4.09e-01 | 95.6% | 87.5% |
| 4063498 | 11.1.1.14 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 | 0.56 | 30.0 | 3.98e-01 | 75.7% | 95.0% |
| 4671861 | 11.1.1.14 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 | 0.56 | 29.0 | 3.85e-01 | 70.7% | 92.0% |
| 3778422 | 11.2.1.12 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DOCK-C2 | 0.55 | 39.0 | 3.81e-01 | 96.1% | 65.6% |
| 3936535 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 31.0 | 3.91e-01 | 75.7% | 92.4% |
| 3518765 | 11.1.1.13 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Motile_Sperm | 0.55 | 34.0 | 4.12e-01 | 82.9% | 94.2% |
| 3418466 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.54 | 36.0 | 3.88e-01 | 95.6% | 78.1% |
| 3567968 | 11.1.1.81 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set | 0.54 | 31.0 | 3.87e-01 | 80.7% | 91.8% |
| 5014637 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.54 | 25.0 | 3.20e-01 | 84.0% | 74.0% |
| 4939116 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 33.0 | 3.95e-01 | 81.8% | 92.5% |
| 3211820 | 11.1.5.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › T-box | 0.52 | 42.0 | 4.16e-01 | 85.1% | 92.1% |
| 3628983 | 10.10.1.1 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT | 0.50 | 31.0 | 3.62e-01 | 97.8% | 89.9% |
| 5058553 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 30.0 | 3.75e-01 | 80.7% | 99.0% |