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BML_08042016_6_5m_scaffold_2_prodigal-single.1__X__X__00266
Bact-VirBML_08042016_6_5m_scaffold_2_prodigal-single.1__X__X__00266
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-96
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00856.34 best | SET | 23.5 | 8.60e-05 | 98.7% | 41.9% |
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4rz0A00 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.86 | 80.0 | 6.95e-01 | 100.0% | 74.6% |
| 3kmaA00 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.79 | 72.0 | 6.52e-01 | 100.0% | 77.1% |
| 2w5yA01 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.79 | 72.0 | 5.70e-01 | 100.0% | 61.3% |
| 5lszA00 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.76 | 68.0 | 4.78e-01 | 100.0% | 39.5% |
| 1zkkB00 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.75 | 67.0 | 5.32e-01 | 100.0% | 62.1% |
| 3rq4A02 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.74 | 66.0 | 5.45e-01 | 100.0% | 62.0% |
| 3ru0A01 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.68 | 62.0 | 5.12e-01 | 100.0% | 59.3% |
| 3ep0A00 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.67 | 59.0 | 5.28e-01 | 100.0% | 69.0% |
| 6g80B01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.65 | 49.0 | 3.54e-01 | 100.0% | 28.5% |
| 2yx0A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 41.0 | 2.67e-01 | 87.3% | 17.9% |
| 3v8oA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 40.0 | 3.85e-01 | 98.7% | 60.8% |
| 3rghA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 42.0 | 3.97e-01 | 100.0% | 64.6% |
| 1pbyA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 38.0 | 3.93e-01 | 100.0% | 72.4% |
| 2joqA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.57 | 40.0 | 4.09e-01 | 94.9% | 78.7% |
| 4m9pA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 40.0 | 3.75e-01 | 100.0% | 60.0% |
| 2qltA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.55 | 46.0 | 3.51e-01 | 89.9% | 100.0% |
| 2ylkA00 | 2.60.40.710 | Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like | 0.54 | 44.0 | 3.70e-01 | 100.0% | 50.3% |
| 4mtlA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 34.0 | 2.61e-01 | 97.5% | 25.0% |
| 2cryA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 41.0 | 3.83e-01 | 97.5% | 66.7% |
| 5weeB00 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.52 | 43.0 | 3.38e-01 | 94.9% | 49.2% |
| 1xovA03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 34.0 | 3.57e-01 | 88.6% | 73.6% |
| 4nofB00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 44.0 | 4.08e-01 | 97.5% | 74.5% |
| 1hxmA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 45.0 | 3.93e-01 | 98.7% | 65.3% |
| 6baoA03 | 3.30.450.270 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain | 0.52 | 36.0 | 3.03e-01 | 74.7% | 96.0% |
| 2raqA01 | 3.30.70.1340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › MTH889-like domain | 0.51 | 38.0 | 3.77e-01 | 97.5% | 75.3% |
| 2v5sA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 36.0 | 3.42e-01 | 98.7% | 59.8% |
| 2yrlA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 34.0 | 3.43e-01 | 100.0% | 67.5% |
| 5k6uA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 35.0 | 3.44e-01 | 97.5% | 65.6% |
| 1xhhA00 | 2.60.40.1900 | Mainly Beta › Sandwich › Immunoglobulin-like › Beta-microseminoprotein (PSP94) domain | 0.50 | 39.0 | 3.78e-01 | 93.7% | 73.6% |
ECOD (73)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4026882 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.86 | 79.0 | 6.14e-01 | 100.0% | 71.9% |
| 3562465 | 70.3.1.13 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET_TTL | 0.84 | 77.0 | 5.42e-01 | 100.0% | 58.3% |
| 5050598 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.83 | 76.0 | 6.38e-01 | 100.0% | 70.8% |
| 3597944 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.83 | 72.0 | 5.43e-01 | 100.0% | 41.1% |
| 3723104 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.83 | 76.0 | 6.36e-01 | 100.0% | 71.5% |
| 3396359 | 70.3.1.13 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET_TTL | 0.83 | 75.0 | 5.31e-01 | 100.0% | 57.0% |
| 3181227 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.83 | 76.0 | 5.32e-01 | 100.0% | 56.1% |
| 3793185 | 70.3.1.13 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET_TTL | 0.83 | 71.0 | 5.72e-01 | 93.7% | 81.8% |
| 3609569 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.81 | 72.0 | 5.81e-01 | 100.0% | 52.4% |
| 3730913 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.81 | 73.0 | 5.11e-01 | 100.0% | 50.6% |
| 4949565 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.81 | 73.0 | 6.26e-01 | 100.0% | 68.8% |
| 3607870 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.81 | 74.0 | 4.86e-01 | 100.0% | 80.0% |
| 4016856 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.81 | 73.0 | 5.11e-01 | 100.0% | 56.7% |
| 3193713 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.81 | 73.0 | 5.18e-01 | 100.0% | 59.1% |
| 3792033 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.80 | 73.0 | 5.17e-01 | 100.0% | 42.2% |
| 3410920 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.80 | 73.0 | 4.88e-01 | 100.0% | 74.0% |
| 3716006 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.80 | 70.0 | 5.70e-01 | 100.0% | 52.4% |
| 4019469 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.80 | 70.0 | 5.57e-01 | 96.2% | 79.4% |
| 3607426 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.80 | 72.0 | 4.99e-01 | 100.0% | 69.0% |
| 3717288 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.80 | 74.0 | 4.78e-01 | 100.0% | 83.7% |
| 3735070 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.80 | 72.0 | 4.98e-01 | 100.0% | 56.5% |
| 3641451 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.80 | 72.0 | 5.49e-01 | 100.0% | 55.9% |
| 3932730 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.79 | 72.0 | 4.70e-01 | 100.0% | 63.7% |
| 3275300 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.79 | 72.0 | 4.76e-01 | 100.0% | 70.3% |
| 3405298 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.79 | 72.0 | 4.86e-01 | 100.0% | 80.7% |
| 3743671 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.79 | 71.0 | 5.57e-01 | 100.0% | 68.5% |
| 3593549 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.79 | 72.0 | 4.74e-01 | 100.0% | 78.4% |
| 3207063 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.79 | 72.0 | 4.71e-01 | 100.0% | 69.4% |
| 3255145 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.79 | 72.0 | 4.91e-01 | 100.0% | 73.6% |
| 3743917 | 70.3.1.8 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET+N-SET | 0.79 | 72.0 | 5.14e-01 | 100.0% | 43.6% |
| 4013445 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.79 | 71.0 | 5.03e-01 | 100.0% | 54.3% |
| 3800259 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.79 | 71.0 | 4.92e-01 | 100.0% | 76.8% |
| 3726834 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.78 | 71.0 | 5.38e-01 | 100.0% | 68.3% |
| 3917273 | 70.3.1.11 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET, zf-MYND | 0.78 | 70.0 | 4.54e-01 | 100.0% | 83.1% |
| 3474503 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.78 | 70.0 | 4.94e-01 | 100.0% | 37.9% |
| 3193960 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.78 | 70.0 | 4.87e-01 | 100.0% | 52.8% |
| 3609570 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.77 | 67.0 | 5.15e-01 | 100.0% | 42.2% |
| 3724370 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.77 | 70.0 | 5.47e-01 | 100.0% | 54.5% |
| 3276538 | 109.4.1.2792 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SET | 0.77 | 70.0 | 4.26e-01 | 100.0% | 51.4% |
| 3601100 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.77 | 68.0 | 5.15e-01 | 100.0% | 41.6% |
| 3716476 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.77 | 69.0 | 4.77e-01 | 100.0% | 77.0% |
| 3790011 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.76 | 68.0 | 4.92e-01 | 100.0% | 43.6% |
| 3795311 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.76 | 68.0 | 5.10e-01 | 100.0% | 50.3% |
| 3241297 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.76 | 68.0 | 4.72e-01 | 100.0% | 76.5% |
| 3994473 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.76 | 68.0 | 5.85e-01 | 100.0% | 74.4% |
| 4603710 | 70.3.1.11 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET, zf-MYND | 0.76 | 68.0 | 4.50e-01 | 100.0% | 85.3% |
| 3837237 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.76 | 68.0 | 4.57e-01 | 100.0% | 71.9% |
| 4015882 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.76 | 68.0 | 4.71e-01 | 100.0% | 78.0% |
| 3566461 | 70.3.1.11 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET, zf-MYND | 0.76 | 68.0 | 4.42e-01 | 100.0% | 77.9% |
| 3706233 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.75 | 67.0 | 4.67e-01 | 100.0% | 78.1% |
| 3396018 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.75 | 67.0 | 4.60e-01 | 100.0% | 81.8% |
| 3600899 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.75 | 68.0 | 4.48e-01 | 100.0% | 75.9% |
| 772 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.75 | 67.0 | 5.86e-01 | 100.0% | 68.9% |
| 3912450 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.74 | 66.0 | 4.54e-01 | 100.0% | 76.7% |
| 3271649 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.74 | 65.0 | 4.51e-01 | 100.0% | 79.9% |
| 3739923 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.74 | 65.0 | 4.57e-01 | 100.0% | 75.7% |
| 3702641 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.73 | 65.0 | 4.44e-01 | 100.0% | 83.6% |
| 3276137 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.73 | 64.0 | 4.52e-01 | 100.0% | 78.6% |
| 3334018 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.72 | 59.0 | 4.46e-01 | 89.9% | 88.6% |
| 3511345 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.72 | 64.0 | 4.56e-01 | 100.0% | 36.7% |
| 3190289 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.70 | 62.0 | 4.42e-01 | 100.0% | 37.1% |
| 3788915 | 70.3.1.19 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › PF27829 | 0.70 | 61.0 | 4.11e-01 | 100.0% | 72.0% |
| 3925222 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.69 | 62.0 | 4.89e-01 | 100.0% | 53.9% |
| 3699954 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.68 | 61.0 | 4.07e-01 | 100.0% | 65.2% |
| 3291483 | 304.121.1.0 ↗ | a+b two layers › Alpha-beta plaits › SP0830-like › SP0830-like | 0.64 | 44.0 | 4.33e-01 | 98.7% | 65.9% |
| 4150303 | 70.3.1.4 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › FOG1-like_PR | 0.60 | 55.0 | 4.89e-01 | 100.0% | 72.7% |
| 3854049 | 70.3.1.4 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › FOG1-like_PR | 0.60 | 55.0 | 4.73e-01 | 100.0% | 66.7% |
| 3922455 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 43.0 | 3.44e-01 | 100.0% | 41.2% |
| 3776207 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.55 | 38.0 | 3.21e-01 | 98.7% | 40.7% |
| 3528118 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.55 | 37.0 | 3.48e-01 | 98.7% | 54.3% |
| 5043621 | 3110.1.1.2 ↗ | a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3-PglB_core | 0.54 | 44.0 | 3.33e-01 | 89.9% | 58.5% |
| 3935231 | 11.1.1.603 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_NUP210_4th | 0.53 | 39.0 | 3.59e-01 | 98.7% | 60.0% |
| 3517280 | 3352.1.1.0 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain | 0.50 | 40.0 | 2.63e-01 | 88.6% | 35.1% |