Back to structures

BML_08042016_6_5m_scaffold_2_prodigal-single.1__X__X__00308

Bact-Vir

BML_08042016_6_5m_scaffold_2_prodigal-single.1__X__X__00308

Identity

Kingdom:
phage

Quality

70.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 4-102
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3b4uA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.60 43.0 3.14e-01 100.0% 25.8%
4hbdA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.59 50.0 3.81e-01 93.9% 56.7%
3akjA02 1.10.1070.20 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › 0.59 44.0 3.60e-01 80.8% 70.6%
3tu3B03 1.20.1050.100 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.57 47.0 3.96e-01 100.0% 52.9%
3qmvB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 46.0 3.43e-01 100.0% 77.6%
3gzsA00 1.25.40.390 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.51 41.0 2.74e-01 92.9% 83.8%
3nnbA01 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.51 43.0 3.03e-01 100.0% 41.0%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4993165 101.1.11.203 alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.52 31.0 3.18e-01 90.9% 57.9%
3934587 611.3.1.5 alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Drf_FH3 0.52 42.0 3.72e-01 90.9% 60.7%