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BML_08042016_6_5m_scaffold_2_prodigal-single.1__X__X__00323
Bact-VirBML_08042016_6_5m_scaffold_2_prodigal-single.1__X__X__00323
Identity
- Kingdom:
- phage
Quality
89.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 30-184
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4h7wA00 | 3.90.1140.10 | Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase | 0.67 | 56.0 | 5.29e-01 | 88.4% | 73.3% |
| 4qakA00 | 3.90.1140.10 | Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase | 0.66 | 54.0 | 5.26e-01 | 87.1% | 93.0% |
| 2fsqA00 | 3.90.1140.10 | Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase | 0.65 | 53.0 | 4.64e-01 | 86.5% | 81.9% |
| 2d4gA00 | 3.90.1140.10 | Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase | 0.60 | 49.0 | 4.81e-01 | 94.2% | 80.8% |
| 2epbA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 23.0 | 3.27e-01 | 81.3% | 77.9% |
| 4pc3C02 | 3.30.479.20 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Elongation factor Ts, dimerisation domain | 0.57 | 32.0 | 4.00e-01 | 80.6% | 94.2% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4972958 | 264.1.1.1 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase | 0.69 | 57.0 | 5.39e-01 | 87.1% | 94.6% |
| 5029239 | 264.1.1.1 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase | 0.68 | 57.0 | 5.40e-01 | 87.1% | 94.4% |
| 3531648 | 264.1.1.7 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS | 0.65 | 53.0 | 5.09e-01 | 87.1% | 93.9% |
| 3553577 | 264.1.1.0 ↗ | beta barrels › LigT-like › LigT-related › LigT-related | 0.63 | 52.0 | 4.97e-01 | 86.5% | 92.0% |
| 3781175 | 264.1.1.0 ↗ | beta barrels › LigT-like › LigT-related › LigT-related | 0.62 | 55.0 | 4.74e-01 | 94.2% | 84.7% |
| 4990492 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 21.0 | 3.49e-01 | 85.2% | 100.0% |
| 1549078 | 274.1.1.14 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › ComP_DUS | 0.50 | 27.0 | 3.44e-01 | 81.9% | 89.9% |