Back to structures

BML_08042016_6_5m_scaffold_2_prodigal-single.1__X__X__00341

Bact-Vir

BML_08042016_6_5m_scaffold_2_prodigal-single.1__X__X__00341

Identity

Kingdom:
phage

Quality

86.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 36-85
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2jrmA00 1.10.10.620 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ribosome modulation factor like domain 0.57 45.0 4.34e-01 98.0% 76.7%
4asvA00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.55 42.0 3.73e-01 88.0% 57.0%
2jnsA01 1.20.1270.220 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.53 35.0 3.06e-01 70.0% 45.7%
4m52A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 39.0 2.59e-01 100.0% 19.8%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4973220 6028.1.1.0 alpha bundles › Ribosome modulation factor › Ribosome modulation factor › Ribosome modulation factor 0.96 89.0 7.97e-01 98.0% 75.4%