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BML_08042016_6_5m_scaffold_3_prodigal-single.1__X__X__00093
Bact-VirBML_08042016_6_5m_scaffold_3_prodigal-single.1__X__X__00093
Identity
- Kingdom:
- phage
Quality
83.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-140
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lccA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 36.0 | 4.73e-01 | 97.8% | 86.8% |
| 3teeA02 | 2.30.30.760 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 31.0 | 4.20e-01 | 90.6% | 78.1% |
| 1zq1A01 | 2.30.30.520 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 36.0 | 4.64e-01 | 92.8% | 88.3% |
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 35.0 | 4.68e-01 | 91.3% | 100.0% |
| 4ec7A00 | 2.10.90.10 | Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines | 0.63 | 28.0 | 3.11e-01 | 89.1% | 50.0% |
| 2w5eA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.61 | 24.0 | 3.28e-01 | 87.0% | 66.2% |
| 3k6yA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.60 | 34.0 | 3.76e-01 | 91.3% | 70.1% |
| 2xzlA02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.56 | 25.0 | 3.28e-01 | 86.2% | 73.4% |
| 3db0B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 29.0 | 3.07e-01 | 96.4% | 54.8% |
| 2ox7A02 | 2.30.30.290 | Mainly Beta › Roll › SH3 type barrels. › YopX-like domains | 0.53 | 26.0 | 3.60e-01 | 94.2% | 95.7% |
| 3u5wA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 28.0 | 2.98e-01 | 94.9% | 56.3% |
| 7xpkA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.50 | 39.0 | 3.90e-01 | 97.8% | 78.6% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4958339 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.73 | 35.0 | 3.87e-01 | 89.9% | 56.4% |
| 3876680 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.72 | 36.0 | 4.15e-01 | 94.2% | 65.0% |
| 3781440 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.70 | 41.0 | 5.23e-01 | 94.9% | 100.0% |
| 3888395 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.59 | 35.0 | 4.48e-01 | 90.6% | 98.8% |
| 3481729 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.57 | 36.0 | 3.86e-01 | 92.0% | 73.3% |
| 4323235 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.55 | 36.0 | 4.03e-01 | 91.3% | 82.7% |
| 3584109 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 42.0 | 4.22e-01 | 96.4% | 77.8% |
| 3419120 | 59.1.4.1 ↗ | beta complex topology › triple barrel › triple barrel › TFIID subunits TAF1-TAF7 › TAFII55_N | 0.54 | 29.0 | 2.79e-01 | 95.7% | 41.9% |
| 3206868 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 34.0 | 3.53e-01 | 92.0% | 65.2% |
| 3493399 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.54 | 42.0 | 3.95e-01 | 97.8% | 68.5% |
| 3652079 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.52 | 25.0 | 2.69e-01 | 92.8% | 49.6% |
| 3290373 | 1.1.5.31 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 | 0.50 | 28.0 | 2.81e-01 | 94.9% | 51.8% |