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BML_08042016_6_5m_scaffold_3_prodigal-single.1__X__X__00238
Bact-VirBML_08042016_6_5m_scaffold_3_prodigal-single.1__X__X__00238
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-74
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1pwuA04 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.67 | 50.0 | 3.53e-01 | 86.5% | 26.7% |
| 5dqqA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.64 | 47.0 | 3.88e-01 | 78.4% | 72.0% |
| 3ibyD02 | 1.10.287.1770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.57 | 45.0 | 4.33e-01 | 85.1% | 81.0% |
| 1zp2A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.54 | 41.0 | 3.72e-01 | 87.8% | 88.4% |
| 1h99A01 | 1.10.1790.10 | Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain | 0.53 | 45.0 | 4.10e-01 | 98.6% | 99.0% |
| 1bvsF03 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.51 | 28.0 | 3.56e-01 | 70.3% | 91.1% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4229895 | 589.1.1.2 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain › SurA_N_3 | 0.65 | 44.0 | 2.99e-01 | 70.3% | 81.0% |
| 3963378 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.65 | 48.0 | 4.44e-01 | 78.4% | 77.9% |
| 3769107 | 592.6.1.4 ↗ | alpha arrays › PWI domain-like › Pre-mRNA-splicing helicase BRR2 plug domain › Pre-mRNA-splicing helicase BRR2 plug domain › PF28135 | 0.61 | 45.0 | 4.42e-01 | 98.6% | 73.4% |
| 5026124 | 164.1.1.1 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › CM_2 | 0.61 | 47.0 | 5.02e-01 | 94.6% | 95.4% |
| 3171735 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.60 | 36.0 | 3.32e-01 | 75.7% | 45.3% |
| 4336048 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.58 | 42.0 | 2.29e-01 | 74.3% | 8.1% |
| 4945144 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.57 | 42.0 | 4.27e-01 | 98.6% | 78.7% |
| 4014996 | 7094.1.1.0 ↗ | alpha bundles › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin | 0.55 | 40.0 | 3.70e-01 | 89.2% | 58.0% |
| 4397497 | 589.1.1.2 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain › SurA_N_3 | 0.54 | 42.0 | 3.18e-01 | 83.8% | 39.4% |
| 3169347 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.51 | 38.0 | 2.53e-01 | 91.9% | 21.5% |