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BML_08042016_6_5m_scaffold_3_prodigal-single.1__X__X__00245
Bact-VirBML_08042016_6_5m_scaffold_3_prodigal-single.1__X__X__00245
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 11-98
D2
medium
residues 99-170
Domain cluster:
rep: MK095605.1__AZS06293.1__MED16_gp53__00053__D109-185
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1t11A03 | 3.10.50.40 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.59 | 41.0 | 3.76e-01 | 72.2% | 87.6% |
| 5z06A01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.55 | 47.0 | 3.67e-01 | 100.0% | 87.9% |
| 4mdwA00 | 2.30.30.1210 | Mainly Beta › Roll › SH3 type barrels. › Domain of unknown function DUF1541 | 0.55 | 39.0 | 3.15e-01 | 75.0% | 89.0% |
| 3hu1A01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.54 | 41.0 | 3.81e-01 | 83.3% | 88.5% |
| 3of1A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 40.0 | 3.40e-01 | 87.5% | 45.1% |
| 3hqxA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 46.0 | 4.16e-01 | 100.0% | 80.0% |
| 2jwpA00 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.53 | 43.0 | 3.43e-01 | 95.8% | 89.7% |
| 1lopA00 | 2.40.100.10 | Mainly Beta › Beta Barrel › Cyclophilin › Cyclophilin-like | 0.53 | 43.0 | 3.48e-01 | 97.2% | 67.1% |
| 2bgoA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 40.0 | 3.53e-01 | 86.1% | 100.0% |
| 2zx2A01 | 2.60.120.740 | Mainly Beta › Sandwich › Jelly Rolls › Rhamnose-binding lectin domain (RBL) | 0.52 | 40.0 | 3.76e-01 | 87.5% | 97.9% |
| 3d30A01 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.52 | 43.0 | 3.87e-01 | 97.2% | 100.0% |
| 4jysB00 | 3.10.50.40 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.52 | 43.0 | 3.80e-01 | 97.2% | 86.8% |
| 1hx6A02 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 42.0 | 3.54e-01 | 98.6% | 73.0% |
| 3gt2A00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.51 | 39.0 | 3.26e-01 | 91.7% | 45.9% |
| 1ep3B01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.51 | 41.0 | 3.75e-01 | 93.1% | 99.0% |
| 1hx6B01 | 2.70.9.30 | Mainly Beta › Distorted Sandwich › Adenovirus Type 2 Hexon; domain 4 › Viral coat protein p3 | 0.50 | 41.0 | 3.06e-01 | 100.0% | 66.5% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4028698 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.57 | 48.0 | 4.16e-01 | 94.4% | 98.2% |
| 4181819 | 1.1.7.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1 | 0.57 | 47.0 | 3.73e-01 | 93.1% | 78.7% |
| 4474017 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.56 | 47.0 | 3.55e-01 | 95.8% | 58.9% |
| 4500954 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.56 | 44.0 | 4.38e-01 | 86.1% | 96.0% |
| 3263407 | 284.1.1.1 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › FKBP_C | 0.55 | 47.0 | 4.10e-01 | 98.6% | 93.9% |
| 4013442 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.54 | 41.0 | 3.88e-01 | 81.9% | 100.0% |
| 4355652 | 1.1.7.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1 | 0.53 | 44.0 | 3.54e-01 | 94.4% | 82.0% |
| 3742814 | 75.1.1.1 ↗ | beta barrels › Cyclophilin-like › Cyclophilin-like › Cyclophilin-like › Pro_isomerase | 0.53 | 43.0 | 3.22e-01 | 93.1% | 72.3% |
| 5061835 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.52 | 41.0 | 3.28e-01 | 87.5% | 99.4% |
| 2502637 | 10.2.1.45 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Phage_Capsid_P3 | 0.52 | 41.0 | 2.94e-01 | 88.9% | 81.1% |
| 3616247 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 41.0 | 3.79e-01 | 94.4% | 99.0% |
| 3391395 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.50 | 41.0 | 3.80e-01 | 95.8% | 99.0% |
| 3574784 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.50 | 42.0 | 3.76e-01 | 97.2% | 86.4% |
| 3202614 | 4.1.1.146 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_uL24m-like | 0.50 | 37.0 | 2.41e-01 | 79.2% | 25.2% |