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BML_08042016_6_5m_scaffold_3_prodigal-single.1__X__X__00294
Bact-VirBML_08042016_6_5m_scaffold_3_prodigal-single.1__X__X__00294
Identity
- Kingdom:
- phage
Quality
82.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-94
Domain cluster:
representative
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4x9cD00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.81 | 41.0 | 4.96e-01 | 75.0% | 75.0% |
| 1kq1H00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 40.0 | 4.61e-01 | 76.1% | 69.7% |
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.68 | 35.0 | 4.48e-01 | 77.2% | 88.5% |
| 4m4zA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.67 | 35.0 | 4.64e-01 | 72.8% | 100.0% |
| 6bogA02 | 2.30.30.930 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 39.0 | 4.62e-01 | 81.5% | 95.0% |
| 2ogqA01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.61 | 43.0 | 3.82e-01 | 71.7% | 92.9% |
| 8t5tA01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.60 | 44.0 | 3.51e-01 | 77.2% | 77.3% |
| 1x05A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 41.0 | 3.63e-01 | 71.7% | 71.3% |
| 1mg2A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 46.0 | 3.03e-01 | 84.8% | 89.0% |
| 3rn5A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 39.0 | 3.91e-01 | 70.7% | 84.8% |
| 1vkdA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.56 | 44.0 | 3.10e-01 | 87.0% | 65.6% |
| 4iapA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 41.0 | 4.14e-01 | 76.1% | 91.3% |
| 1upqA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 39.0 | 3.77e-01 | 73.9% | 67.3% |
| 2kxcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 36.0 | 4.10e-01 | 97.8% | 92.5% |
| 2aq5A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 45.0 | 3.03e-01 | 89.1% | 85.5% |
| 3a9gA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.54 | 48.0 | 3.29e-01 | 100.0% | 80.2% |
| 5zg8A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 38.0 | 3.73e-01 | 73.9% | 85.3% |
| 1yr2A02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.54 | 42.0 | 2.92e-01 | 85.9% | 47.7% |
| 4gnxB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 41.0 | 3.77e-01 | 82.6% | 67.2% |
| 1npeA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.53 | 47.0 | 3.43e-01 | 100.0% | 76.0% |
| 3i7fA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 39.0 | 3.57e-01 | 78.3% | 96.9% |
| 3cxbB00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 36.0 | 3.56e-01 | 71.7% | 75.7% |
| 2dhkA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 37.0 | 3.61e-01 | 72.8% | 88.0% |
| 3q7yA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.52 | 39.0 | 3.63e-01 | 81.5% | 100.0% |
| 4joiA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 41.0 | 3.61e-01 | 85.9% | 87.9% |
| 2gumB03 | 2.30.29.100 | Mainly Beta › Roll › PH-domain like › | 0.52 | 38.0 | 3.50e-01 | 78.3% | 92.6% |
| 3fm8D03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 36.0 | 3.43e-01 | 71.7% | 63.0% |
| 1u5dA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 38.0 | 3.62e-01 | 77.2% | 70.4% |
| 7sulB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 45.0 | 3.11e-01 | 100.0% | 61.0% |
| 2bklA02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.51 | 40.0 | 2.74e-01 | 84.8% | 88.8% |
| 1upsA02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.51 | 38.0 | 3.44e-01 | 81.5% | 97.7% |
| 5ee2A00 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.50 | 43.0 | 3.95e-01 | 95.7% | 95.9% |
| 3nvqA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 39.0 | 2.56e-01 | 85.9% | 41.4% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4058174 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.80 | 45.0 | 5.27e-01 | 82.6% | 78.5% |
| 3964666 | 4.1.1.137 ↗ | beta barrels › SH3 › SH3 › SH3 › PcrA_UvrD_tudor | 0.65 | 36.0 | 4.20e-01 | 72.8% | 80.0% |
| 4972485 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 37.0 | 4.48e-01 | 77.2% | 94.5% |
| 3710438 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.60 | 42.0 | 3.91e-01 | 72.8% | 82.6% |
| 4003604 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 42.0 | 4.08e-01 | 77.2% | 81.0% |
| 3223841 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.58 | 44.0 | 3.47e-01 | 80.4% | 70.8% |
| 4083083 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.57 | 46.0 | 3.21e-01 | 87.0% | 82.0% |
| 3617983 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 51.0 | 3.31e-01 | 97.8% | 79.5% |
| 3799100 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.56 | 51.0 | 3.39e-01 | 98.9% | 92.6% |
| 3926600 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.55 | 41.0 | 3.84e-01 | 77.2% | 80.9% |
| 3940063 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.55 | 40.0 | 4.02e-01 | 76.1% | 89.5% |
| 3548074 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.54 | 40.0 | 3.65e-01 | 77.2% | 82.5% |
| 3425697 | 3257.1.1.1 ↗ | a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N | 0.54 | 44.0 | 3.52e-01 | 89.1% | 67.6% |
| 3246507 | 10.1.1.49 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_59_C | 0.54 | 43.0 | 3.29e-01 | 87.0% | 91.2% |
| 3780929 | 5.1.3.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b | 0.52 | 46.0 | 3.37e-01 | 100.0% | 72.8% |
| 3861121 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.52 | 36.0 | 3.45e-01 | 73.9% | 66.1% |
| 3894565 | 4207.1.2.65 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region › OLF | 0.51 | 44.0 | 2.90e-01 | 95.7% | 61.3% |