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BML_08042016_6_5m_scaffold_3_prodigal-single.1__X__X__00358

Bact-Vir

BML_08042016_6_5m_scaffold_3_prodigal-single.1__X__X__00358

Identity

Kingdom:
phage

Quality

82.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-66
PDB
CATH (58)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.88 66.0 6.63e-01 100.0% 79.0%
3lx7A01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.86 55.0 6.34e-01 100.0% 89.1%
2jngA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.85 65.0 5.99e-01 100.0% 64.9%
2ckkA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.82 63.0 6.60e-01 100.0% 89.5%
2d9tA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.82 60.0 6.65e-01 100.0% 98.0%
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.82 60.0 5.55e-01 100.0% 62.3%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.82 57.0 5.64e-01 100.0% 70.3%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.81 57.0 5.63e-01 100.0% 69.7%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.81 58.0 6.51e-01 96.8% 100.0%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.80 66.0 6.08e-01 100.0% 69.6%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.80 59.0 6.05e-01 100.0% 81.4%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 57.0 5.53e-01 100.0% 69.1%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.79 55.0 5.89e-01 100.0% 85.2%
3h8zA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 52.0 5.81e-01 95.2% 89.6%
1vq8Q00 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.77 65.0 5.57e-01 100.0% 60.0%
3vygD00 2.30.30.50 Mainly Beta › Roll › SH3 type barrels. › 0.76 70.0 5.54e-01 100.0% 71.4%
1v29B02 2.30.30.50 Mainly Beta › Roll › SH3 type barrels. › 0.75 69.0 5.86e-01 100.0% 83.5%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 57.0 6.04e-01 100.0% 96.2%
5zwzA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 62.0 5.93e-01 98.4% 80.0%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 62.0 5.68e-01 100.0% 70.4%
2ekhA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 60.0 5.45e-01 100.0% 67.5%
2rqrA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 61.0 4.87e-01 100.0% 47.1%
1vwxT01 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.73 66.0 5.64e-01 100.0% 62.9%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 59.0 6.02e-01 100.0% 93.2%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 59.0 6.00e-01 100.0% 90.3%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 61.0 6.13e-01 100.0% 92.2%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 58.0 5.80e-01 100.0% 85.9%
2eczA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 59.0 5.71e-01 100.0% 80.0%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 59.0 5.67e-01 100.0% 80.0%
2dl5A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 59.0 5.45e-01 100.0% 71.8%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 59.0 5.98e-01 100.0% 93.3%
4iimA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 56.0 5.79e-01 100.0% 93.0%
1ov3A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 56.0 5.95e-01 100.0% 98.2%
3h6zA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 58.0 4.74e-01 100.0% 50.0%
2v1qA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 59.0 5.98e-01 100.0% 95.0%
6vlfA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 57.0 5.93e-01 100.0% 96.6%
5o99A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 56.0 5.68e-01 100.0% 90.0%
6ghmC02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 58.0 5.76e-01 100.0% 89.1%
1awoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 54.0 5.61e-01 100.0% 94.7%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 57.0 5.56e-01 100.0% 86.6%
1zuuA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 55.0 5.68e-01 98.4% 100.0%
2i0nA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 54.0 5.61e-01 100.0% 96.5%
1k1zA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 60.0 5.56e-01 100.0% 80.8%
2vknA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 54.0 5.37e-01 100.0% 84.8%
6o5cA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.66 57.0 5.42e-01 100.0% 84.2%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.64 53.0 4.80e-01 100.0% 67.9%
4z88A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 57.0 5.63e-01 100.0% 96.9%
6e55A01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.64 54.0 5.19e-01 100.0% 89.2%
2egeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 55.0 5.17e-01 100.0% 82.7%
2e70A00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 44.0 4.31e-01 100.0% 69.0%
3hrsA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.61 53.0 5.00e-01 100.0% 82.9%
2dk7A00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.61 38.0 3.64e-01 74.2% 53.4%
2rprA00 2.20.25.240 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.61 41.0 3.75e-01 96.8% 50.6%
1ycyA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 44.0 4.49e-01 100.0% 82.3%
3kf8B00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 49.0 3.93e-01 93.5% 77.5%
8ainB01 3.10.450.250 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › S. aureus uracil DNA glycosylase inhibitor 0.55 45.0 3.83e-01 95.2% 54.3%
3d3rA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 41.0 3.72e-01 95.2% 60.2%
7bspA01 2.70.150.10 Mainly Beta › Distorted Sandwich › Calcium-transporting ATPase, cytoplasmic transduction domain A › Calcium-transporting ATPase, cytoplasmic transduction domain A 0.50 40.0 3.25e-01 100.0% 78.3%
ECOD (87)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3519125 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.90 63.0 6.99e-01 100.0% 90.0%
3885049 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.89 66.0 7.00e-01 100.0% 87.3%
3419491 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.88 69.0 7.01e-01 100.0% 85.0%
4027263 4.1.1.104 beta barrels › SH3 › SH3 › SH3 › KN17_SH3 0.85 65.0 5.13e-01 100.0% 41.7%
3922903 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.84 64.0 6.55e-01 100.0% 83.3%
3558188 4.1.1.101 beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.83 59.0 5.51e-01 100.0% 61.3%
3451175 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 60.0 6.34e-01 100.0% 87.3%
5074039 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 69.0 6.40e-01 100.0% 76.0%
5067227 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 69.0 6.14e-01 100.0% 68.7%
5011500 4.1.1.14 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.79 68.0 5.67e-01 100.0% 57.0%
4937705 4.1.1.14 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.79 68.0 5.88e-01 100.0% 63.3%
4284598 4.1.1.14 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.77 66.0 5.78e-01 100.0% 63.3%
3372243 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 57.0 5.23e-01 100.0% 61.3%
4400641 4.1.1.397 beta barrels › SH3 › SH3 › SH3 › PF29622 0.76 71.0 6.46e-01 100.0% 88.7%
5064571 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 64.0 5.60e-01 100.0% 63.3%
2126408 4.1.1.34 beta barrels › SH3 › SH3 › SH3 › MBT 0.75 57.0 5.22e-01 100.0% 63.0%
3843554 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.75 62.0 6.01e-01 100.0% 80.0%
3457106 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.75 60.0 5.98e-01 100.0% 83.1%
3597690 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 60.0 5.75e-01 100.0% 77.1%
1545879 4.1.1.120 beta barrels › SH3 › SH3 › SH3 › SH3_16 0.74 67.0 5.64e-01 100.0% 100.0%
3505437 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.74 62.0 5.58e-01 100.0% 67.1%
3808601 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 68.0 6.00e-01 100.0% 85.9%
3546309 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.73 60.0 5.67e-01 100.0% 74.7%
3898952 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.73 61.0 5.71e-01 100.0% 74.7%
3333322 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.73 59.0 4.51e-01 100.0% 40.0%
3629316 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 57.0 4.80e-01 100.0% 52.0%
3599257 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 59.0 5.84e-01 100.0% 84.6%
3368864 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.72 59.0 5.83e-01 100.0% 83.1%
3484007 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 60.0 5.79e-01 100.0% 80.0%
3490689 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.72 59.0 5.68e-01 100.0% 78.6%
3591824 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.72 62.0 5.93e-01 100.0% 82.9%
3482868 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.72 59.0 6.17e-01 100.0% 100.0%
3485745 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.72 60.0 6.08e-01 100.0% 93.3%
3700770 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 57.0 5.77e-01 100.0% 88.3%
3915732 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.71 59.0 5.31e-01 100.0% 65.9%
3236054 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.71 57.0 5.39e-01 100.0% 72.0%
3484618 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.71 60.0 5.64e-01 100.0% 76.0%
3778124 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.71 56.0 5.58e-01 100.0% 81.5%
3793311 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.71 60.0 6.14e-01 100.0% 96.7%
1386398 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.71 58.0 5.43e-01 100.0% 73.3%
3541996 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.71 57.0 3.99e-01 100.0% 28.4%
4013671 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 58.0 6.09e-01 100.0% 100.0%
3514867 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.71 57.0 5.33e-01 100.0% 72.0%
3698582 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.71 60.0 5.82e-01 100.0% 82.9%
3725260 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.71 57.0 5.53e-01 98.4% 78.6%
3612092 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 65.0 6.05e-01 100.0% 94.7%
25836 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.71 60.0 5.70e-01 100.0% 80.6%
3788449 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 57.0 5.52e-01 100.0% 78.6%
3482683 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 56.0 5.74e-01 100.0% 90.0%
3705995 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 62.0 5.75e-01 100.0% 97.5%
3801719 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.70 57.0 5.48e-01 100.0% 78.6%
4001172 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.70 59.0 5.67e-01 100.0% 81.4%
3207081 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.70 62.0 6.15e-01 98.4% 93.8%
3529708 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 57.0 5.38e-01 100.0% 74.7%
3880325 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.69 56.0 5.40e-01 98.4% 78.6%
3170922 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.69 55.0 5.33e-01 98.4% 79.4%
2849853 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.68 57.0 5.59e-01 100.0% 85.1%
3700378 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 55.0 5.58e-01 100.0% 90.0%
4675879 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.68 60.0 3.91e-01 100.0% 23.8%
4020558 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 54.0 5.37e-01 100.0% 84.6%
3706000 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.68 60.0 5.66e-01 100.0% 86.7%
3475429 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 60.0 5.80e-01 100.0% 92.9%
3692073 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.67 53.0 5.16e-01 100.0% 78.6%
1031943 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.67 54.0 5.10e-01 100.0% 74.3%
3749194 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.67 53.0 5.31e-01 100.0% 85.9%
3243188 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.67 61.0 5.68e-01 100.0% 82.7%
1031172 4.1.1.113 beta barrels › SH3 › SH3 › SH3 › TraI_2B 0.66 51.0 4.85e-01 100.0% 70.8%
3339162 4.1.1.330 beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O, SH3-C_UBE2O 0.66 61.0 4.70e-01 100.0% 47.7%
3937776 4.1.1.308 beta barrels › SH3 › SH3 › SH3 › PF31073 0.66 60.0 5.71e-01 100.0% 86.3%
3675653 4.1.1.239 beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O 0.66 61.0 5.68e-01 100.0% 82.7%
3931715 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.66 58.0 4.97e-01 100.0% 96.0%
3576940 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 60.0 3.97e-01 100.0% 28.0%
3216019 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 58.0 5.75e-01 100.0% 95.4%
3763497 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.65 58.0 5.46e-01 100.0% 84.0%
3631165 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 56.0 5.12e-01 100.0% 75.3%
4655719 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.64 58.0 5.09e-01 100.0% 68.9%
3890362 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 55.0 5.28e-01 93.5% 85.7%
4930563 4.1.1.40 beta barrels › SH3 › SH3 › SH3 › FeoA 0.63 52.0 5.11e-01 100.0% 85.7%
3782292 4.1.1.170 beta barrels › SH3 › SH3 › SH3 › Rad9_Rad53_bind 0.63 58.0 5.28e-01 100.0% 80.0%
3231154 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 56.0 5.16e-01 100.0% 92.5%
3389662 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.62 52.0 4.81e-01 100.0% 73.8%
3172870 4.1.1.67 beta barrels › SH3 › SH3 › SH3 › FDF 0.61 45.0 4.04e-01 100.0% 54.7%
3622911 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.60 49.0 4.78e-01 100.0% 82.9%
3390503 708.1.1.4 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.59 41.0 4.10e-01 96.8% 70.8%
3210897 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 49.0 4.46e-01 100.0% 72.9%
3333660 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.52 45.0 3.38e-01 100.0% 62.5%
None 0.51 45.0 2.71e-01 100.0% 37.7%