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BML_08042016_6_5m_scaffold_3_prodigal-single.1__X__X__00389

Bact-Vir

BML_08042016_6_5m_scaffold_3_prodigal-single.1__X__X__00389

Identity

Kingdom:
phage

Quality

94.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-84
PDB
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1k3xA01 3.20.190.10 Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal 0.70 38.0 3.31e-01 100.0% 34.1%
4wj7D00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 55.0 4.89e-01 100.0% 95.1%
2basA03 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.59 53.0 4.68e-01 98.8% 87.1%
2p0hA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 50.0 4.52e-01 100.0% 88.1%
1skoA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.58 54.0 4.67e-01 100.0% 74.8%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.58 51.0 4.31e-01 98.8% 76.5%
3u6xS00 2.60.40.3320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 51.0 4.71e-01 100.0% 90.5%
1wguA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 49.0 4.44e-01 100.0% 96.5%
1t6lA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.57 47.0 3.31e-01 90.1% 82.3%
4xpmB00 3.40.1840.10 Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like 0.56 44.0 4.72e-01 90.1% 100.0%
2d9wA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 49.0 4.49e-01 100.0% 90.9%
3f0zA01 3.30.310.260 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.56 35.0 3.23e-01 76.5% 45.5%
3pvlA04 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 49.0 4.64e-01 100.0% 84.8%
3tw8A01 3.30.450.200 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin module 0.55 50.0 4.15e-01 98.8% 66.7%
2hf6A00 3.30.450.60 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.55 51.0 4.11e-01 100.0% 55.0%
2jpiA00 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.55 36.0 3.44e-01 79.0% 56.2%
4harA00 3.10.50.50 Alpha Beta › Roll › Chitinase A; domain 3 › Rubella virus capsid protein 0.55 46.0 4.37e-01 93.8% 98.0%
1ifqB00 3.30.450.50 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain 0.55 48.0 4.13e-01 96.3% 64.8%
2bg1A02 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.55 48.0 3.27e-01 100.0% 85.3%
2xa7M01 3.30.450.60 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.55 49.0 4.25e-01 97.5% 65.8%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 46.0 4.30e-01 100.0% 78.0%
5hsqA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.54 46.0 3.97e-01 93.8% 70.5%
7yh1A01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.54 49.0 4.37e-01 100.0% 78.1%
3c8cB01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.54 46.0 3.99e-01 95.1% 62.2%
1w63Q00 3.30.450.60 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.54 48.0 3.89e-01 97.5% 53.4%
4jglA00 2.40.128.530 Mainly Beta › Beta Barrel › Lipocalin › 0.53 41.0 3.46e-01 86.4% 79.6%
3fwlA02 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.53 46.0 3.00e-01 100.0% 70.0%
3weoA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.52 39.0 2.79e-01 80.2% 66.9%
3ms6A00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.52 43.0 4.20e-01 90.1% 85.6%
3fm8D03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 46.0 4.19e-01 100.0% 87.0%
3udfA01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.52 46.0 3.01e-01 100.0% 75.2%
2grgA01 3.40.1840.10 Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like 0.52 42.0 4.25e-01 88.9% 86.7%
6g1yA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.52 45.0 3.96e-01 96.3% 93.3%
1y4oA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.52 44.0 4.07e-01 93.8% 79.8%
1tuwA00 3.30.70.1090 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel. 0.52 34.0 3.13e-01 87.7% 51.9%
2j3wC00 3.30.450.70 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.52 45.0 3.83e-01 98.8% 65.2%
2oolA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 43.0 3.94e-01 92.6% 86.9%
6h5bB01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.51 46.0 4.06e-01 100.0% 77.3%
1kw3B02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.51 41.0 3.42e-01 90.1% 98.1%
2aq5A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 41.0 2.78e-01 90.1% 98.8%
4wiwA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.51 38.0 4.00e-01 81.5% 100.0%
6baoA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 44.0 3.72e-01 98.8% 72.7%
1mpyA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.51 39.0 3.24e-01 82.7% 78.5%
3uaqB01 2.40.128.250 Mainly Beta › Beta Barrel › Lipocalin › 0.51 41.0 3.71e-01 88.9% 94.5%
3vpbA02 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.51 33.0 3.60e-01 86.4% 79.7%
ECOD (82)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3705153 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 58.0 4.95e-01 100.0% 77.8%
3176053 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 54.0 4.66e-01 100.0% 77.7%
3618395 864.1.1.3 a+b two layers › DLC › DLC › DLC › Ground-like 0.60 33.0 3.42e-01 88.9% 56.8%
5052178 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.60 54.0 4.86e-01 97.5% 80.0%
3629860 223.2.1.43 a+b three layers › Profilin-like › profilin-like › profilin-like › FNIP_M 0.60 54.0 4.32e-01 100.0% 70.4%
4947581 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.60 54.0 4.83e-01 100.0% 71.8%
3167797 223.5.1.1 a+b three layers › Profilin-like › YNR034W-A-like › YNR034W-A-like › YNR034W-A-like 0.59 48.0 5.11e-01 90.1% 100.0%
5046009 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.59 54.0 4.55e-01 100.0% 68.5%
4985746 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.59 53.0 4.82e-01 100.0% 75.2%
4971503 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.58 54.0 4.58e-01 100.0% 69.5%
3611536 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.58 46.0 3.94e-01 87.7% 93.3%
3231336 223.2.1.9 a+b three layers › Profilin-like › profilin-like › profilin-like › Sedlin_N 0.58 52.0 4.41e-01 100.0% 68.1%
185116 295.1.1.2 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › SsgA 0.58 51.0 4.30e-01 98.8% 75.9%
5079496 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.58 52.0 4.59e-01 97.5% 79.1%
4000383 223.2.1.19 a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_1 0.58 52.0 4.05e-01 100.0% 64.6%
5051542 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.58 53.0 3.96e-01 100.0% 86.8%
3507450 223.2.1.12 a+b three layers › Profilin-like › profilin-like › profilin-like › MAPKK1_Int 0.57 52.0 4.49e-01 100.0% 71.2%
5046813 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.57 52.0 4.61e-01 100.0% 80.0%
5072371 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.57 51.0 4.76e-01 97.5% 84.0%
5076068 223.2.1.3 a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s 0.57 51.0 4.67e-01 97.5% 80.0%
5048741 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.57 51.0 4.56e-01 97.5% 72.7%
2779090 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.57 48.0 4.51e-01 90.1% 86.5%
4002901 223.2.1.12 a+b three layers › Profilin-like › profilin-like › profilin-like › MAPKK1_Int 0.57 52.0 4.29e-01 100.0% 62.9%
3183393 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.57 47.0 4.45e-01 88.9% 89.5%
4979666 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.57 50.0 4.47e-01 97.5% 76.5%
3341742 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 50.0 3.98e-01 100.0% 50.3%
5046979 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 51.0 4.56e-01 97.5% 73.6%
5001318 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 49.0 4.43e-01 98.8% 70.0%
3497850 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 50.0 3.94e-01 97.5% 53.9%
4944860 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 52.0 4.25e-01 100.0% 63.6%
5045719 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 49.0 4.25e-01 95.1% 69.4%
4018561 223.2.1.10 a+b three layers › Profilin-like › profilin-like › profilin-like › Gtr1_RagA 0.56 49.0 4.12e-01 100.0% 80.0%
3714622 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 48.0 4.23e-01 100.0% 64.2%
3387865 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.56 44.0 4.22e-01 93.8% 72.6%
4069753 295.1.1.2 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › SsgA 0.56 48.0 4.17e-01 100.0% 76.3%
5046444 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 49.0 4.06e-01 96.3% 60.7%
3599007 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 47.0 4.40e-01 91.4% 86.0%
4999961 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 51.0 4.38e-01 100.0% 74.8%
3948977 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.56 49.0 4.37e-01 95.1% 71.8%
4945318 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 51.0 4.50e-01 100.0% 73.9%
3928706 223.2.1.19 a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_1 0.55 50.0 3.94e-01 100.0% 67.9%
3715519 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 48.0 3.57e-01 100.0% 38.0%
5078530 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 50.0 4.55e-01 97.5% 77.1%
5063657 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.55 50.0 4.40e-01 100.0% 74.8%
5049690 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 49.0 4.12e-01 100.0% 67.1%
3491036 223.2.1.16 a+b three layers › Profilin-like › profilin-like › profilin-like › LAMTOR5 0.55 46.0 4.48e-01 90.1% 84.3%
4945424 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 50.0 4.24e-01 100.0% 69.2%
4945712 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 49.0 4.24e-01 98.8% 66.4%
5051015 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 50.0 3.99e-01 100.0% 57.4%
4890947 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.55 46.0 4.12e-01 91.4% 76.8%
4998686 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 49.0 3.94e-01 97.5% 63.3%
3834262 223.2.1.15 a+b three layers › Profilin-like › profilin-like › profilin-like › Longin 0.55 47.0 3.89e-01 98.8% 54.3%
4964955 223.2.1.63 a+b three layers › Profilin-like › profilin-like › profilin-like › DUF7522 0.54 50.0 4.22e-01 100.0% 68.2%
5038289 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 49.0 4.15e-01 100.0% 63.7%
4947218 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 48.0 4.33e-01 100.0% 79.8%
4948155 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 48.0 4.15e-01 100.0% 70.8%
5073565 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 44.0 4.26e-01 87.7% 87.8%
2817021 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.54 44.0 3.81e-01 90.1% 68.8%
3924796 223.2.1.12 a+b three layers › Profilin-like › profilin-like › profilin-like › MAPKK1_Int 0.54 48.0 4.30e-01 100.0% 73.9%
5049111 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 47.0 4.09e-01 98.8% 67.2%
3414531 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.53 43.0 4.14e-01 87.7% 84.2%
5079770 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 48.0 4.22e-01 100.0% 75.0%
3658352 223.2.1.15 a+b three layers › Profilin-like › profilin-like › profilin-like › Longin 0.53 45.0 3.83e-01 98.8% 57.0%
3401904 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.53 46.0 4.14e-01 96.3% 80.0%
3827261 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 46.0 3.91e-01 100.0% 60.0%
4945022 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 44.0 4.10e-01 91.4% 80.0%
4944643 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 46.0 4.07e-01 100.0% 66.7%
3623755 223.2.1.16 a+b three layers › Profilin-like › profilin-like › profilin-like › LAMTOR5 0.52 47.0 4.17e-01 100.0% 74.8%
3956080 223.3.1.0 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins 0.52 46.0 3.20e-01 100.0% 68.7%
3344476 223.2.1.33 a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 0.52 46.0 3.93e-01 100.0% 68.9%
5048994 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 46.0 4.06e-01 100.0% 70.0%
3391637 223.1.1.77 a+b three layers › Profilin-like › sensor domains › sensor domains › Intu_longin_3 0.51 46.0 4.29e-01 100.0% 82.5%
4972333 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 46.0 3.98e-01 100.0% 72.8%
5073548 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.51 42.0 3.99e-01 91.4% 82.0%
5052370 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 46.0 4.16e-01 100.0% 79.1%
4882206 223.1.1.12 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_2 0.51 45.0 3.97e-01 98.8% 81.0%
4436836 223.3.1.14 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase, PF29195 0.51 43.0 2.88e-01 97.5% 48.7%
5024071 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 44.0 3.93e-01 100.0% 67.8%
4599893 223.3.1.3 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase 0.51 43.0 3.03e-01 97.5% 62.5%
3744424 312.1.1.6 a+b three layers › HIT-like › HIT-related › HIT-related › CwfJ_C_2,CwfJ_C_1 0.50 36.0 2.75e-01 76.5% 38.6%
3974035 223.3.1.3 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase 0.50 42.0 3.00e-01 97.5% 62.1%
4979423 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.50 44.0 3.78e-01 100.0% 66.7%