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BML_08042016_6_5m_scaffold_3_prodigal-single.1__X__X__00439
Bact-VirBML_08042016_6_5m_scaffold_3_prodigal-single.1__X__X__00439
Identity
- Kingdom:
- phage
Quality
93.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-80
Domain cluster:
rep: KP211958.1__AJK27662.1__PTIM40_187__00187__D97-158
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u5kA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 39.0 | 3.81e-01 | 80.3% | 95.1% |
| 5bxrA03 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.52 | 36.0 | 2.88e-01 | 71.8% | 90.1% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4017584 | 2485.1.1.39 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GST_N_2 | 0.54 | 42.0 | 3.99e-01 | 88.7% | 71.1% |
| 3510739 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.54 | 38.0 | 3.92e-01 | 73.2% | 92.3% |
| 4091312 | 2.1.1.26 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB | 0.54 | 38.0 | 3.64e-01 | 76.1% | 96.5% |
| 3810129 | 376.1.2.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 | 0.53 | 38.0 | 3.97e-01 | 77.5% | 84.6% |
| 5079542 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.53 | 43.0 | 3.07e-01 | 90.1% | 92.9% |
| 3989940 | 246.2.1.9 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos_2 | 0.52 | 41.0 | 2.86e-01 | 90.1% | 77.5% |
| 3936754 | 2485.1.1.26 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › HyaE | 0.51 | 40.0 | 3.27e-01 | 88.7% | 64.1% |
| 3516766 | 209.1.1.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like | 0.51 | 39.0 | 3.23e-01 | 87.3% | 69.7% |
| 4862298 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.51 | 36.0 | 3.36e-01 | 84.5% | 56.8% |