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BML_08182015_1_5m_scaffold_15_prodigal-single.1__X__X__00143

Bact-Vir

BML_08182015_1_5m_scaffold_15_prodigal-single.1__X__X__00143

Identity

Kingdom:
phage

Quality

81.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-58
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3qf7A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 42.0 2.69e-01 73.7% 53.7%
1e6vC00 3.90.320.20 Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › Methyl-coenzyme M reductase, gamma subunit 0.55 43.0 2.83e-01 86.0% 71.8%
4dwsA01 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.54 36.0 2.84e-01 70.2% 59.3%
1zxuA00 2.40.160.200 Mainly Beta › Beta Barrel › Porin › LURP1-related 0.54 42.0 3.22e-01 94.7% 78.4%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3998938 6110.1.1.1 alpha superhelices › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › DHC_N2 0.66 47.0 2.79e-01 78.9% 38.8%
3715372 6110.1.1.1 alpha superhelices › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › DHC_N2 0.63 50.0 3.18e-01 91.2% 67.2%
4996608 2007.9.1.4 a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR_2 0.56 37.0 2.51e-01 94.7% 19.0%
3737735 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.56 38.0 2.36e-01 71.9% 48.4%
3497020 64.1.1.1 beta meanders › WW domain-like › WW domain › WW domain › WW 0.50 34.0 3.76e-01 89.5% 93.0%
D2 high residues 62-110
PDB
Domain cluster: representative