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BML_08182015_1_5m_scaffold_15_prodigal-single.1__X__X__00162
Bact-VirBML_08182015_1_5m_scaffold_15_prodigal-single.1__X__X__00162
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-119
Domain cluster:
rep: BML_08182015_1_5m_scaffold_1_prodigal-single.1__X__X__00031__D2-161
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4bfeC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 37.0 | 3.87e-01 | 96.6% | 69.8% |
| 5ixgA00 | 2.40.128.110 | Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like | 0.57 | 51.0 | 4.55e-01 | 99.2% | 100.0% |
| 1wubA00 | 2.40.128.110 | Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like | 0.57 | 50.0 | 4.43e-01 | 98.3% | 97.7% |
| 1qexA03 | 2.60.40.1680 | Mainly Beta › Sandwich › Immunoglobulin-like › 4-oxalocrotonate tautomerase-like | 0.55 | 41.0 | 4.16e-01 | 97.5% | 79.8% |
| 3h2dB00 | 3.40.1550.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chemotaxis protein chec › CheC-like | 0.54 | 38.0 | 3.45e-01 | 89.8% | 55.2% |
| 2rdeA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.54 | 33.0 | 3.42e-01 | 86.4% | 63.1% |
| 2h6oA01 | 2.60.40.2800 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 45.0 | 4.14e-01 | 97.5% | 71.1% |
| 2x1cB01 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.52 | 38.0 | 2.88e-01 | 74.6% | 84.8% |
| 2q3xA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.52 | 31.0 | 2.94e-01 | 96.6% | 47.2% |
| 1yemB00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.52 | 38.0 | 3.43e-01 | 91.5% | 54.8% |
| 3r07C00 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.52 | 37.0 | 4.15e-01 | 89.0% | 100.0% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5057532 | 101.1.2.893 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF2226 | 0.60 | 40.0 | 3.01e-01 | 95.8% | 28.3% |
| 3570185 | 10.10.1.0 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.60 | 34.0 | 3.49e-01 | 97.5% | 56.5% |
| 3937294 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.59 | 39.0 | 3.40e-01 | 89.0% | 43.9% |
| 4938115 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.58 | 35.0 | 4.28e-01 | 94.9% | 95.9% |
| 3964209 | 9.5.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein TT1927B › Hypothetical protein TT1927B › YceI | 0.57 | 51.0 | 4.53e-01 | 98.3% | 98.8% |
| 864 | 9.5.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein TT1927B › Hypothetical protein TT1927B › YceI | 0.57 | 50.0 | 4.43e-01 | 98.3% | 97.7% |
| 2713846 | 866.1.1.3 ↗ | a+b duplicates or obligate multimers › CheC-like › CheC-like › CheC-like › CheX | 0.54 | 37.0 | 3.46e-01 | 89.8% | 57.0% |
| 3592631 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.52 | 45.0 | 3.32e-01 | 92.4% | 39.7% |