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BML_08182015_1_5m_scaffold_19_prodigal-single.1__X__X__00007
Bact-VirBML_08182015_1_5m_scaffold_19_prodigal-single.1__X__X__00007
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-74
Domain cluster:
rep: LacPavin_0818_WC40_scaffold_26136_prodigal-single.1__X__X__00310__D2-67
CATH (80)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hi9D00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.68 | 55.0 | 5.30e-01 | 100.0% | 76.8% |
| 4bhqA00 | 3.30.70.2830 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 45.0 | 3.98e-01 | 87.5% | 45.9% |
| 2bopA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.68 | 61.0 | 5.78e-01 | 100.0% | 88.2% |
| 5w0hA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.68 | 55.0 | 5.32e-01 | 100.0% | 78.8% |
| 3ue2A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.67 | 60.0 | 5.61e-01 | 100.0% | 94.3% |
| 2yq1C00 | 3.30.70.390 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Epstein Barr virus nuclear antigen-1, DNA-binding domain | 0.66 | 54.0 | 4.48e-01 | 100.0% | 50.4% |
| 3bf4A01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 58.0 | 5.27e-01 | 100.0% | 96.0% |
| 1tr0A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 58.0 | 5.14e-01 | 100.0% | 88.7% |
| 2ftrA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 58.0 | 5.14e-01 | 100.0% | 89.3% |
| 2mq8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.65 | 58.0 | 5.04e-01 | 100.0% | 80.4% |
| 5xzqF00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 57.0 | 5.07e-01 | 100.0% | 91.3% |
| 3bb5A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 56.0 | 5.07e-01 | 100.0% | 93.2% |
| 2rilA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 57.0 | 5.23e-01 | 100.0% | 86.3% |
| 1j2vA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 57.0 | 5.12e-01 | 100.0% | 78.2% |
| 5xoyB02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 57.0 | 5.00e-01 | 100.0% | 85.0% |
| 3bguA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 56.0 | 5.14e-01 | 100.0% | 81.2% |
| 1p1lA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 54.0 | 4.84e-01 | 100.0% | 67.6% |
| 6gdxA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 53.0 | 4.74e-01 | 100.0% | 64.5% |
| 6urtA02 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 55.0 | 5.23e-01 | 100.0% | 88.6% |
| 4pxdA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 56.0 | 4.83e-01 | 100.0% | 80.0% |
| 8c46A01 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 56.0 | 4.86e-01 | 100.0% | 80.7% |
| 2ii3A01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.63 | 54.0 | 3.93e-01 | 100.0% | 85.7% |
| 5b08A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 55.0 | 5.01e-01 | 100.0% | 92.0% |
| 4q7aC02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 56.0 | 4.91e-01 | 100.0% | 85.2% |
| 3udcA03 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 55.0 | 5.21e-01 | 100.0% | 83.0% |
| 2vfrA04 | 3.30.70.2520 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 55.0 | 5.07e-01 | 100.0% | 79.8% |
| 5mmjv00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.63 | 56.0 | 5.48e-01 | 100.0% | 92.5% |
| 1rjjA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 54.0 | 4.75e-01 | 100.0% | 70.3% |
| 2ypyA00 | 3.30.70.390 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Epstein Barr virus nuclear antigen-1, DNA-binding domain | 0.62 | 55.0 | 4.51e-01 | 100.0% | 59.0% |
| 3fmbA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 54.0 | 4.90e-01 | 100.0% | 90.0% |
| 1tz0B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 55.0 | 5.00e-01 | 100.0% | 85.6% |
| 1a7gE00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.62 | 54.0 | 5.24e-01 | 100.0% | 87.8% |
| 3pfoA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 53.0 | 4.49e-01 | 100.0% | 79.7% |
| 4pxeA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 53.0 | 4.60e-01 | 100.0% | 78.6% |
| 1m5hA02 | 3.30.70.520 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 53.0 | 4.29e-01 | 100.0% | 52.7% |
| 4rx6D00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 51.0 | 4.52e-01 | 100.0% | 63.6% |
| 4ewtA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 53.0 | 4.61e-01 | 100.0% | 80.0% |
| 3mgjA00 | 3.30.70.2690 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › LOR/SDH bifunctional enzyme, conserved domain | 0.61 | 53.0 | 4.90e-01 | 100.0% | 80.2% |
| 2rb7A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 53.0 | 4.69e-01 | 100.0% | 89.7% |
| 3ramA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 52.0 | 4.48e-01 | 100.0% | 78.0% |
| 3gb0A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 53.0 | 4.62e-01 | 100.0% | 91.1% |
| 2cz4A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 52.0 | 4.75e-01 | 100.0% | 80.8% |
| 6s6yD02 | 3.30.70.520 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 52.0 | 4.14e-01 | 100.0% | 93.4% |
| 4lbhA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.59 | 52.0 | 4.82e-01 | 100.0% | 89.4% |
| 7o4xA01 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 52.0 | 4.75e-01 | 100.0% | 78.8% |
| 3qa8A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.59 | 35.0 | 3.43e-01 | 88.9% | 50.6% |
| 1nbwA02 | 3.90.470.30 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Coenzyme B12-Dependent Enzyme linker domain | 0.59 | 46.0 | 3.70e-01 | 84.7% | 92.3% |
| 6wubf01 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.59 | 51.0 | 4.72e-01 | 100.0% | 92.6% |
| 3n5fA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 50.0 | 4.41e-01 | 100.0% | 78.9% |
| 4wsqB00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.58 | 52.0 | 3.41e-01 | 100.0% | 40.6% |
| 3bn7A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 49.0 | 4.49e-01 | 100.0% | 92.2% |
| 1v8cA02 | 3.30.1370.80 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Molybdopterin cofactor biosynthesis MoaD-related, C-terminal domain | 0.58 | 49.0 | 4.85e-01 | 100.0% | 95.0% |
| 2f7vA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 51.0 | 4.49e-01 | 100.0% | 88.0% |
| 1cg2A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 50.0 | 4.45e-01 | 100.0% | 80.0% |
| 3nrbB01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.58 | 50.0 | 4.83e-01 | 100.0% | 88.0% |
| 4qclA02 | 3.30.70.2820 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 51.0 | 4.44e-01 | 100.0% | 82.9% |
| 3mcnA01 | 3.30.70.560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK | 0.58 | 50.0 | 4.03e-01 | 100.0% | 55.1% |
| 3cedA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.58 | 50.0 | 4.54e-01 | 100.0% | 72.4% |
| 3tupA02 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.57 | 49.0 | 4.55e-01 | 100.0% | 79.2% |
| 2ku7A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 50.0 | 4.06e-01 | 100.0% | 52.9% |
| 2ek0A00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.57 | 43.0 | 4.05e-01 | 83.3% | 67.8% |
| 2qrrA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.57 | 46.0 | 4.25e-01 | 100.0% | 68.0% |
| 1t0tV02 | 3.30.70.1030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 | 0.57 | 48.0 | 4.29e-01 | 100.0% | 79.3% |
| 1rtzA00 | 3.30.70.560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK | 0.56 | 48.0 | 3.88e-01 | 100.0% | 57.9% |
| 7oocE01 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.56 | 47.0 | 4.53e-01 | 98.6% | 96.5% |
| 5wy8B03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 49.0 | 4.29e-01 | 100.0% | 75.9% |
| 1vkvA01 | 3.30.428.10 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like | 0.56 | 47.0 | 3.63e-01 | 98.6% | 57.2% |
| 3io1A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 48.0 | 4.17e-01 | 100.0% | 90.5% |
| 3htxD03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 41.0 | 3.02e-01 | 81.9% | 86.4% |
| 1r6yA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 48.0 | 4.35e-01 | 100.0% | 89.3% |
| 1b7yB06 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.55 | 47.0 | 4.48e-01 | 100.0% | 91.9% |
| 1qf6A02 | 3.30.980.10 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 | 0.54 | 44.0 | 3.94e-01 | 91.7% | 63.2% |
| 2y3uA02 | 3.30.980.50 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › | 0.54 | 41.0 | 3.62e-01 | 84.7% | 72.6% |
| 2qswA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.53 | 47.0 | 4.40e-01 | 100.0% | 80.0% |
| 5h80B03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.53 | 47.0 | 3.25e-01 | 100.0% | 30.7% |
| 1el6A02 | 2.20.20.20 | Mainly Beta › Single Sheet › Anthopleurin-A › Baseplate structural protein gp11, C-terminal domain | 0.53 | 31.0 | 3.64e-01 | 83.3% | 89.4% |
| 6qdwt00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.53 | 43.0 | 4.04e-01 | 94.4% | 71.0% |
| 1xcjA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 40.0 | 2.86e-01 | 83.3% | 31.0% |
| 3i4hX02 | 3.30.70.1900 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 44.0 | 3.97e-01 | 100.0% | 94.2% |
| 4o4bB00 | 3.30.470.160 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Inositol polyphosphate kinase | 0.51 | 43.0 | 3.05e-01 | 100.0% | 79.6% |
ECOD (91)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3683773 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.70 | 63.0 | 5.08e-01 | 100.0% | 53.8% |
| 3741555 | 4969.1.1.0 ↗ | alpha bundles › thumb domain in bacteriophage RB69-like DNA polymerase I › thumb domain in bacteriophage RB69-like DNA polymerase I › thumb domain in bacteriophage RB69-like DNA polymerase I | 0.69 | 63.0 | 4.35e-01 | 100.0% | 48.7% |
| 3759055 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.69 | 61.0 | 5.06e-01 | 100.0% | 56.0% |
| 4649118 | 2484.1.1.197 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1, DNA_pol_B_exo2 | 0.69 | 63.0 | 3.87e-01 | 100.0% | 26.8% |
| 4554366 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.69 | 61.0 | 5.19e-01 | 100.0% | 60.9% |
| 4405678 | 304.114.1.6 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain › DNA_pol_B_exo1 | 0.68 | 61.0 | 4.06e-01 | 100.0% | 26.4% |
| 3550113 | 4969.1.1.0 ↗ | alpha bundles › thumb domain in bacteriophage RB69-like DNA polymerase I › thumb domain in bacteriophage RB69-like DNA polymerase I › thumb domain in bacteriophage RB69-like DNA polymerase I | 0.68 | 62.0 | 5.10e-01 | 100.0% | 96.0% |
| 4451470 | 304.126.1.1 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.67 | 59.0 | 4.86e-01 | 100.0% | 53.8% |
| 4337362 | 304.44.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 | 0.67 | 60.0 | 5.39e-01 | 100.0% | 92.0% |
| 3569962 | 4323.1.1.1 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.67 | 59.0 | 5.40e-01 | 100.0% | 73.7% |
| 4953055 | 304.18.1.0 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS | 0.67 | 56.0 | 5.53e-01 | 100.0% | 89.3% |
| 5281 | 304.15.1.1 ↗ | a+b two layers › Alpha-beta plaits › Viral DNA-binding domain › Viral DNA-binding domain › PPV_E2_C | 0.67 | 60.0 | 5.62e-01 | 100.0% | 83.9% |
| 3959355 | 304.8.1.107 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ALO | 0.66 | 59.0 | 4.70e-01 | 100.0% | 52.1% |
| 1288930 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.66 | 60.0 | 5.35e-01 | 100.0% | 93.1% |
| 3508551 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.66 | 60.0 | 5.02e-01 | 100.0% | 92.5% |
| 4859785 | 304.4.1.14 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Dabb | 0.66 | 58.0 | 5.13e-01 | 100.0% | 88.7% |
| 5184 | 304.4.1.11 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › EthD | 0.65 | 58.0 | 5.14e-01 | 100.0% | 89.3% |
| 3781323 | 304.9.1.6 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › Smg4_UPF3 | 0.65 | 59.0 | 5.29e-01 | 100.0% | 73.0% |
| 3938655 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.65 | 55.0 | 5.20e-01 | 100.0% | 77.8% |
| 3614265 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.65 | 58.0 | 4.91e-01 | 100.0% | 71.7% |
| 4865069 | 304.4.1.14 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Dabb | 0.65 | 57.0 | 5.10e-01 | 100.0% | 75.7% |
| 3664706 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.64 | 56.0 | 5.39e-01 | 100.0% | 84.7% |
| 4026023 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.64 | 58.0 | 5.20e-01 | 100.0% | 85.0% |
| 3283902 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.64 | 57.0 | 3.85e-01 | 100.0% | 28.5% |
| 3709329 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.64 | 57.0 | 4.89e-01 | 100.0% | 71.3% |
| 4023966 | 304.9.1.6 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › Smg4_UPF3 | 0.64 | 56.0 | 4.51e-01 | 100.0% | 50.0% |
| 4979070 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.64 | 56.0 | 4.99e-01 | 100.0% | 88.6% |
| 5019207 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.63 | 56.0 | 4.70e-01 | 100.0% | 72.0% |
| 3685983 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.63 | 54.0 | 3.82e-01 | 100.0% | 34.8% |
| 3355031 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.63 | 55.0 | 4.53e-01 | 100.0% | 67.4% |
| 4945451 | 304.25.1.11 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › Peptidase_M20 | 0.63 | 55.0 | 4.74e-01 | 100.0% | 79.1% |
| 3721754 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.63 | 55.0 | 4.70e-01 | 100.0% | 72.5% |
| 4554405 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.63 | 54.0 | 4.93e-01 | 100.0% | 84.0% |
| 5044583 | 304.21.1.1 ↗ | a+b two layers › Alpha-beta plaits › Formylmethanofuran:tetrahydromethanopterin formyltransferase › Formylmethanofuran:tetrahydromethanopterin formyltransferase › FTR | 0.62 | 54.0 | 4.53e-01 | 100.0% | 59.2% |
| 4166367 | 304.102.1.2 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruD | 0.62 | 53.0 | 4.04e-01 | 100.0% | 38.9% |
| 3516671 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.62 | 54.0 | 4.70e-01 | 100.0% | 81.7% |
| 4235653 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.62 | 55.0 | 5.21e-01 | 100.0% | 94.1% |
| 4422649 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.61 | 53.0 | 4.95e-01 | 100.0% | 90.4% |
| 3728575 | 312.1.1.9 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › DUF3605 | 0.61 | 51.0 | 3.79e-01 | 95.8% | 41.5% |
| 5075656 | 304.21.1.1 ↗ | a+b two layers › Alpha-beta plaits › Formylmethanofuran:tetrahydromethanopterin formyltransferase › Formylmethanofuran:tetrahydromethanopterin formyltransferase › FTR | 0.61 | 53.0 | 4.29e-01 | 100.0% | 53.1% |
| 3301739 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.61 | 52.0 | 3.58e-01 | 100.0% | 31.4% |
| 2775273 | 304.51.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related | 0.60 | 53.0 | 4.49e-01 | 100.0% | 65.9% |
| 3402965 | 304.4.1.15 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › NIPSNAP | 0.60 | 52.0 | 4.75e-01 | 100.0% | 95.0% |
| 3726103 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.60 | 52.0 | 4.76e-01 | 100.0% | 85.0% |
| 4948404 | 304.21.1.1 ↗ | a+b two layers › Alpha-beta plaits › Formylmethanofuran:tetrahydromethanopterin formyltransferase › Formylmethanofuran:tetrahydromethanopterin formyltransferase › FTR | 0.60 | 53.0 | 4.25e-01 | 100.0% | 93.8% |
| 3633027 | 304.57.1.2 ↗ | a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like › Pop8 | 0.60 | 52.0 | 4.48e-01 | 100.0% | 69.2% |
| 4578845 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.60 | 53.0 | 4.79e-01 | 100.0% | 78.6% |
| 3875700 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.59 | 51.0 | 4.99e-01 | 100.0% | 91.3% |
| 5077735 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.59 | 51.0 | 4.34e-01 | 100.0% | 96.0% |
| 3939548 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.59 | 52.0 | 4.76e-01 | 100.0% | 95.8% |
| 4421674 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.59 | 51.0 | 4.72e-01 | 100.0% | 84.0% |
| 3242509 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.59 | 50.0 | 4.20e-01 | 100.0% | 74.1% |
| 3564603 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.59 | 52.0 | 4.76e-01 | 100.0% | 90.5% |
| 5023975 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.59 | 50.0 | 4.25e-01 | 97.2% | 59.2% |
| 4628567 | 304.12.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 | 0.58 | 49.0 | 4.33e-01 | 100.0% | 64.3% |
| 4510101 | 304.12.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 | 0.58 | 50.0 | 4.32e-01 | 100.0% | 69.2% |
| 3444216 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.58 | 51.0 | 3.39e-01 | 98.6% | 42.7% |
| 5029180 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.58 | 51.0 | 4.28e-01 | 100.0% | 70.4% |
| 3784198 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.58 | 51.0 | 4.54e-01 | 100.0% | 90.5% |
| 3816949 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.58 | 51.0 | 3.42e-01 | 100.0% | 51.9% |
| 3823835 | 304.4.1.78 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › DUF7036 | 0.58 | 50.0 | 4.47e-01 | 100.0% | 74.3% |
| 4993856 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.57 | 50.0 | 4.47e-01 | 100.0% | 68.6% |
| 3566139 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.57 | 51.0 | 4.45e-01 | 100.0% | 81.8% |
| 3795203 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.57 | 49.0 | 3.33e-01 | 98.6% | 44.1% |
| 4229727 | 304.12.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 | 0.57 | 48.0 | 4.02e-01 | 100.0% | 60.0% |
| 3630837 | 304.4.1.15 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › NIPSNAP | 0.57 | 51.0 | 4.31e-01 | 100.0% | 74.2% |
| 5057185 | 882.1.1.4 ↗ | a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding | 0.57 | 49.0 | 3.99e-01 | 100.0% | 79.3% |
| 3339622 | 2003.1.5.342 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TYW2_N_2 | 0.57 | 41.0 | 2.97e-01 | 88.9% | 24.8% |
| 3574731 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 48.0 | 4.27e-01 | 100.0% | 90.0% |
| 3406835 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 47.0 | 4.36e-01 | 100.0% | 95.0% |
| 4997602 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.56 | 48.0 | 4.33e-01 | 100.0% | 74.3% |
| 4975579 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.55 | 48.0 | 3.82e-01 | 100.0% | 59.4% |
| 3235142 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.55 | 48.0 | 3.08e-01 | 98.6% | 32.9% |
| 4003081 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 42.0 | 4.21e-01 | 86.1% | 80.0% |
| 3738615 | 304.109.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23 | 0.55 | 45.0 | 3.88e-01 | 90.3% | 58.3% |
| 3537229 | 310.3.1.21 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › HNOB | 0.55 | 41.0 | 3.67e-01 | 91.7% | 55.2% |
| 4978896 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.55 | 48.0 | 3.79e-01 | 100.0% | 49.7% |
| 3494762 | 886.1.1.0 ↗ | a+b duplicates or obligate multimers › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain | 0.55 | 46.0 | 3.64e-01 | 100.0% | 44.7% |
| 3698177 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.54 | 45.0 | 3.98e-01 | 100.0% | 69.6% |
| 3637901 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.54 | 45.0 | 4.12e-01 | 100.0% | 82.9% |
| 3622609 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 44.0 | 3.94e-01 | 100.0% | 81.7% |
| 3604793 | 304.109.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e | 0.53 | 43.0 | 3.45e-01 | 91.7% | 45.3% |
| 3941747 | 101.1.9.78 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › AntA | 0.53 | 45.0 | 3.99e-01 | 100.0% | 71.8% |
| 3177336 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.52 | 45.0 | 4.04e-01 | 100.0% | 74.3% |
| 3174572 | 101.1.9.15 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › BHD_3 | 0.52 | 43.0 | 3.76e-01 | 100.0% | 58.3% |
| 4808078 | 304.109.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23 | 0.52 | 44.0 | 4.36e-01 | 94.4% | 92.0% |
| 3617194 | 864.1.1.0 ↗ | a+b two layers › DLC › DLC › DLC | 0.51 | 39.0 | 3.30e-01 | 84.7% | 46.9% |
| 3827929 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.51 | 42.0 | 2.90e-01 | 98.6% | 41.3% |
| 4229029 | 304.9.1.75 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › DUF8436 | 0.51 | 43.0 | 4.24e-01 | 100.0% | 96.2% |
| 4809499 | 304.109.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e | 0.51 | 40.0 | 3.90e-01 | 90.3% | 76.5% |
| 4999152 | 872.1.1.2 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › Dodecin | 0.50 | 39.0 | 4.03e-01 | 86.1% | 91.3% |