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BML_08182015_1_5m_scaffold_19_prodigal-single.1XX__00014

Bact-Vir

BML_08182015_1_5m_scaffold_19_prodigal-single.1__X__X__00014

Identity

Kingdom:: phage

Quality

94.6 mean pLDDT

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 59-189

PDB

Domain cluster: rep: MW960030.1__QWY82978.1__X__00024__D5-103

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1vk1A01	3.90.1530.10	Alpha Beta › Alpha-Beta Complex › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain	0.78	50.0	5.65e-01	84.7%	83.3%
1xw3A01	3.90.1530.10	Alpha Beta › Alpha-Beta Complex › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain	0.72	50.0	5.67e-01	77.1%	95.8%
3eyyA02	3.30.1490.190	Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ferric-uptake regulator, C-terminal dimerisarion domain	0.50	18.0	2.61e-01	70.2%	70.6%

ECOD (30)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3945776	876.1.1.1 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc	0.85	60.0	7.05e-01	84.0%	100.0%
5032171	876.1.1.1 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc	0.84	54.0	6.64e-01	80.2%	100.0%
5052345	876.1.1.1 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc	0.82	55.0	6.56e-01	86.3%	100.0%
4928673	876.1.1.1 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc	0.81	49.0	6.24e-01	73.3%	100.0%
1842312	876.1.1.0 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin	0.79	49.0	5.98e-01	76.3%	94.2%
5031072	876.1.1.9 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DndB	0.79	64.0	6.22e-01	84.7%	97.2%
4929132	876.1.1.1 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc	0.79	56.0	6.50e-01	80.9%	100.0%
5083282	876.1.1.0 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin	0.79	58.0	6.63e-01	84.0%	100.0%
4927766	876.1.1.1 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc	0.79	49.0	6.01e-01	74.0%	96.5%
3283779	876.1.1.9 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DndB	0.77	61.0	6.07e-01	81.7%	100.0%
2543651	876.1.1.1 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc	0.77	50.0	5.97e-01	77.9%	96.6%
5073795	876.1.1.0 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin	0.77	60.0	6.22e-01	81.7%	100.0%
2061501	876.1.1.1 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc	0.76	50.0	5.70e-01	80.9%	86.9%
3948471	876.1.1.1 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc	0.76	63.0	6.71e-01	93.1%	100.0%
3278076	876.1.1.0 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin	0.75	51.0	6.03e-01	77.9%	100.0%
3946729	876.1.1.0 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin	0.74	52.0	6.04e-01	77.9%	98.9%
3723395	876.1.1.6 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › PF29418	0.74	64.0	6.72e-01	93.1%	100.0%
5016948	876.1.1.7 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › AIPR	0.74	60.0	5.55e-01	84.7%	86.9%
3971842	876.1.1.1 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc	0.74	52.0	5.26e-01	77.1%	72.3%
3602844	876.1.1.1 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc	0.73	51.0	5.34e-01	80.2%	77.5%
3839086	876.1.1.4 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DUF262	0.72	55.0	4.64e-01	79.4%	100.0%
3178377	876.1.1.1 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc	0.70	53.0	5.43e-01	77.9%	91.2%
5080912	876.1.1.9 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DndB	0.70	57.0	5.78e-01	84.7%	95.3%
4370861	876.1.1.0 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin	0.70	55.0	6.00e-01	88.5%	99.1%
4947338	876.1.1.0 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin	0.69	58.0	5.11e-01	90.1%	92.6%
5081788	876.1.1.4 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DUF262	0.68	54.0	5.86e-01	82.4%	100.0%
5069965	876.1.1.0 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin	0.68	50.0	5.15e-01	80.9%	80.0%
5067429	876.1.1.0 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin	0.64	50.0	5.47e-01	84.7%	96.4%
3283211	876.1.1.0 ↗	a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin	0.64	48.0	4.71e-01	77.1%	86.4%
3704848	212.1.1.0 ↗	a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like	0.51	25.0	2.90e-01	87.0%	64.4%

D2 medium residues 190-375

PDB

Domain cluster: representative

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5xs2B02	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.53	34.0	3.87e-01	80.6%	88.6%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
None	—		0.50	44.0	3.22e-01	98.4%	94.7%