←Back to structures
BML_08182015_1_5m_scaffold_19_prodigal-single.1__X__X__00085
Bact-VirBML_08182015_1_5m_scaffold_19_prodigal-single.1__X__X__00085
Identity
- Kingdom:
- phage
Quality
56.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 691-740
Domain cluster:
representative
CATH (71)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5d1oA02 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.69 | 53.0 | 4.87e-01 | 92.0% | 65.8% |
| 3gm8A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.69 | 52.0 | 4.54e-01 | 92.0% | 53.8% |
| 2jveA00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.68 | 57.0 | 5.16e-01 | 96.0% | 91.5% |
| 1hnfA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 51.0 | 4.38e-01 | 94.0% | 50.6% |
| 2vugA02 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.68 | 53.0 | 4.79e-01 | 92.0% | 62.5% |
| 3arxA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 55.0 | 4.20e-01 | 92.0% | 39.6% |
| 4esnA00 | 2.60.320.10 | Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › N-utilization substance G protein NusG, insert domain | 0.68 | 56.0 | 4.82e-01 | 92.0% | 100.0% |
| 1yq2A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 56.0 | 4.30e-01 | 94.0% | 52.2% |
| 3gfoA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.67 | 46.0 | 2.96e-01 | 72.0% | 47.0% |
| 2w1nA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 55.0 | 4.71e-01 | 96.0% | 57.3% |
| 3skvA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.66 | 55.0 | 3.93e-01 | 96.0% | 30.5% |
| 2fcbA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 50.0 | 4.21e-01 | 88.0% | 48.3% |
| 2xfdA00 | 2.60.60.40 | Mainly Beta › Sandwich › Lipoxygenase-1 › | 0.66 | 52.0 | 4.08e-01 | 96.0% | 40.4% |
| 3d3aA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.66 | 49.0 | 3.68e-01 | 90.0% | 31.3% |
| 2vsdA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 53.0 | 4.37e-01 | 92.0% | 50.5% |
| 1jihA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.65 | 52.0 | 3.63e-01 | 98.0% | 74.3% |
| 2gy5A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 52.0 | 4.32e-01 | 90.0% | 51.1% |
| 3ld7A00 | 2.60.320.10 | Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › N-utilization substance G protein NusG, insert domain | 0.65 | 54.0 | 4.57e-01 | 96.0% | 100.0% |
| 3egrA00 | 3.10.20.520 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phenylacetic acid degradation B | 0.65 | 51.0 | 4.81e-01 | 90.0% | 85.7% |
| 1iamA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 53.0 | 4.32e-01 | 96.0% | 49.0% |
| 4devD01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.65 | 54.0 | 4.10e-01 | 96.0% | 38.4% |
| 3afoB02 | 2.60.200.30 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › Probable inorganic polyphosphate/atp-NAD kinase; domain 2 | 0.64 | 51.0 | 3.78e-01 | 90.0% | 56.2% |
| 5e16A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 50.0 | 3.61e-01 | 92.0% | 30.4% |
| 2wngA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 53.0 | 4.39e-01 | 90.0% | 56.3% |
| 7t7zA01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.64 | 54.0 | 3.89e-01 | 96.0% | 39.9% |
| 1d2oA01 | 2.60.40.1140 | Mainly Beta › Sandwich › Immunoglobulin-like › Collagen-binding surface protein Cna, B-type domain | 0.64 | 54.0 | 4.29e-01 | 96.0% | 47.7% |
| 3oqgA00 | 3.40.1440.50 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › | 0.64 | 53.0 | 3.64e-01 | 94.0% | 55.1% |
| 1edqA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 50.0 | 3.96e-01 | 92.0% | 41.1% |
| 2w3jA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.63 | 52.0 | 3.81e-01 | 92.0% | 36.5% |
| 5tipA01 | 2.70.9.10 | Mainly Beta › Distorted Sandwich › Adenovirus Type 2 Hexon; domain 4 › Adenovirus Type 2 Hexon, domain 4 | 0.63 | 50.0 | 3.46e-01 | 90.0% | 46.3% |
| 2waoA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.63 | 50.0 | 3.93e-01 | 92.0% | 40.5% |
| 4h87A00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.63 | 52.0 | 3.95e-01 | 94.0% | 86.3% |
| 1gttA01 | 3.90.850.10 | Alpha Beta › Alpha-Beta Complex › Fumarylacetoacetate hydrolase; domain 2 › Fumarylacetoacetase-like, C-terminal domain | 0.63 | 51.0 | 3.38e-01 | 92.0% | 32.2% |
| 2vvfA01 | 2.60.120.730 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 52.0 | 3.80e-01 | 94.0% | 56.0% |
| 1w15A00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.62 | 53.0 | 3.97e-01 | 98.0% | 41.7% |
| 6grqA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 51.0 | 4.26e-01 | 92.0% | 55.7% |
| 1z0sA02 | 2.60.200.30 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › Probable inorganic polyphosphate/atp-NAD kinase; domain 2 | 0.62 | 49.0 | 3.71e-01 | 88.0% | 60.8% |
| 5jipA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 52.0 | 4.28e-01 | 94.0% | 55.6% |
| 2q1mA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 50.0 | 3.88e-01 | 96.0% | 39.7% |
| 7mjrA04 | 2.60.40.1790 | Mainly Beta › Sandwich › Immunoglobulin-like › Fungal immunomodulatory protein Fve | 0.61 | 50.0 | 4.18e-01 | 94.0% | 54.3% |
| 1ollA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 50.0 | 4.10e-01 | 92.0% | 52.6% |
| 2kl6A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 52.0 | 4.08e-01 | 96.0% | 47.2% |
| 5aa7A00 | 2.70.50.50 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › chitin-binding protein cbp21 | 0.61 | 51.0 | 3.74e-01 | 94.0% | 34.5% |
| 1zxqA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 51.0 | 4.07e-01 | 96.0% | 51.4% |
| 2if7B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 46.0 | 3.89e-01 | 96.0% | 48.3% |
| 1wzoB02 | 3.90.850.10 | Alpha Beta › Alpha-Beta Complex › Fumarylacetoacetate hydrolase; domain 2 › Fumarylacetoacetase-like, C-terminal domain | 0.61 | 50.0 | 3.39e-01 | 94.0% | 35.4% |
| 1v8hA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 48.0 | 3.83e-01 | 90.0% | 43.4% |
| 2pw9C03 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.60 | 50.0 | 3.76e-01 | 98.0% | 37.0% |
| 3i7jA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.60 | 48.0 | 3.04e-01 | 90.0% | 71.4% |
| 4fkeA03 | 2.60.40.1910 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 46.0 | 3.99e-01 | 90.0% | 51.7% |
| 1rj8A00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 49.0 | 3.65e-01 | 96.0% | 37.9% |
| 1zczA02 | 3.40.140.20 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › AICAR transformylase, duplication domain | 0.59 | 46.0 | 3.66e-01 | 92.0% | 39.3% |
| 4p02B01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 50.0 | 3.67e-01 | 94.0% | 37.6% |
| 1pgsA02 | 2.60.120.230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 50.0 | 3.56e-01 | 100.0% | 48.0% |
| 3dh1B00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.59 | 46.0 | 3.44e-01 | 98.0% | 81.2% |
| 1vcaA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 48.0 | 3.85e-01 | 96.0% | 51.8% |
| 4ht1T00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 49.0 | 3.65e-01 | 96.0% | 38.2% |
| 3fogA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.58 | 45.0 | 3.66e-01 | 88.0% | 86.3% |
| 4ehiA02 | 3.40.140.20 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › AICAR transformylase, duplication domain | 0.58 | 46.0 | 3.40e-01 | 96.0% | 60.3% |
| 2jwpA00 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.57 | 45.0 | 3.21e-01 | 94.0% | 55.7% |
| 5nz7A01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.56 | 47.0 | 2.91e-01 | 100.0% | 29.1% |
| 4gb7A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.56 | 48.0 | 2.88e-01 | 100.0% | 73.7% |
| 5ujeA01 | 3.30.1760.10 | Alpha Beta › 2-Layer Sandwich › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, domain 2 › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, domain 2 | 0.56 | 42.0 | 3.42e-01 | 90.0% | 58.6% |
| 5o5iA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 43.0 | 3.66e-01 | 96.0% | 53.3% |
| 3kt4A02 | 3.60.130.20 | Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Oxoglutarate/iron-dependent oxygenase, C-terminal degradation domain | 0.54 | 44.0 | 2.77e-01 | 98.0% | 93.0% |
| 7sf2D01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 44.0 | 3.09e-01 | 94.0% | 42.1% |
| 3w5nA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 41.0 | 3.02e-01 | 96.0% | 44.9% |
| 2oxgC00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 41.0 | 3.47e-01 | 100.0% | 49.5% |
| 1njhA00 | 2.70.180.10 | Mainly Beta › Distorted Sandwich › Protein Yojf; Chain: A; › Hypothetical protein YojF | 0.51 | 42.0 | 3.37e-01 | 96.0% | 79.6% |
| 3r7wC02 | 3.30.450.190 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.50 | 42.0 | 3.35e-01 | 96.0% | 66.4% |
| 1vl4A01 | 3.30.2290.10 | Alpha Beta › 2-Layer Sandwich › PmbA/TldD fold › PmbA/TldD superfamily | 0.50 | 42.0 | 2.89e-01 | 100.0% | 69.8% |
ECOD (80)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3566248 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.71 | 56.0 | 4.78e-01 | 92.0% | 77.8% |
| 4427421 | 3529.1.1.6 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Band_7 | 0.71 | 48.0 | 5.02e-01 | 92.0% | 77.8% |
| 5009898 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.70 | 55.0 | 4.78e-01 | 90.0% | 57.3% |
| 5070589 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.69 | 56.0 | 4.54e-01 | 96.0% | 47.4% |
| 3343541 | 3529.1.1.0 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain | 0.69 | 47.0 | 4.87e-01 | 92.0% | 80.0% |
| 3540047 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 51.0 | 4.32e-01 | 96.0% | 48.2% |
| 3477628 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 57.0 | 4.43e-01 | 96.0% | 42.6% |
| 3522420 | 11.1.1.86 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Lep_receptor_Ig | 0.68 | 56.0 | 4.50e-01 | 96.0% | 47.4% |
| 5048474 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 55.0 | 4.35e-01 | 94.0% | 42.9% |
| 3781133 | 304.24.1.7 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › V_ATPase_I | 0.67 | 53.0 | 4.65e-01 | 92.0% | 88.7% |
| 3873264 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.67 | 50.0 | 3.78e-01 | 96.0% | 32.8% |
| 3211324 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.67 | 55.0 | 4.41e-01 | 92.0% | 64.0% |
| 3522926 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.67 | 52.0 | 4.23e-01 | 92.0% | 45.3% |
| None | — | 0.66 | 55.0 | 3.13e-01 | 98.0% | 8.4% | |
| 3351227 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.66 | 55.0 | 3.36e-01 | 98.0% | 14.6% |
| 3563545 | 11.1.1.178 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 | 0.66 | 55.0 | 3.80e-01 | 96.0% | 27.9% |
| 5020358 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 52.0 | 4.29e-01 | 92.0% | 47.8% |
| 5081264 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 54.0 | 4.60e-01 | 90.0% | 56.2% |
| 3377897 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.66 | 55.0 | 3.13e-01 | 98.0% | 9.2% |
| 4938052 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 53.0 | 4.45e-01 | 94.0% | 51.8% |
| 4851798 | 11.1.1.111 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ChitinaseA_N | 0.66 | 53.0 | 3.90e-01 | 92.0% | 34.1% |
| 1621265 | 2007.5.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL | 0.66 | 56.0 | 3.33e-01 | 96.0% | 28.3% |
| 170118 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.66 | 55.0 | 4.52e-01 | 96.0% | 50.5% |
| 4937440 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 50.0 | 4.18e-01 | 90.0% | 46.7% |
| 1158363 | 10.32.1.171 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › SsfX3_N | 0.66 | 55.0 | 3.94e-01 | 96.0% | 30.9% |
| 5047920 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 53.0 | 4.33e-01 | 90.0% | 50.5% |
| 3754873 | 11.1.1.178 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 | 0.65 | 49.0 | 4.09e-01 | 96.0% | 45.6% |
| 3751614 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.65 | 50.0 | 4.11e-01 | 94.0% | 45.3% |
| 5003527 | 2492.1.1.7 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › FdhD-NarQ | 0.65 | 54.0 | 3.94e-01 | 98.0% | 34.7% |
| 5047409 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 52.0 | 4.40e-01 | 90.0% | 54.1% |
| 3858272 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.65 | 53.0 | 4.33e-01 | 90.0% | 53.3% |
| 4056401 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 56.0 | 4.81e-01 | 100.0% | 85.0% |
| 5050378 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 55.0 | 4.55e-01 | 94.0% | 52.2% |
| 5047059 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 52.0 | 4.32e-01 | 90.0% | 51.1% |
| 4863940 | 10.2.1.54 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid_N | 0.64 | 51.0 | 3.71e-01 | 90.0% | 63.2% |
| 3588351 | 11.1.4.12 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Cna_B | 0.64 | 54.0 | 4.57e-01 | 96.0% | 60.0% |
| 2388345 | 3363.1.1.3 ↗ | beta sandwiches › avirulence protein AvrPiz-t homologs › avirulence protein AvrPiz-t homologs › avirulence protein AvrPiz-t homologs › AVR-Pik_HID | 0.63 | 53.0 | 4.29e-01 | 92.0% | 62.4% |
| 5071009 | 11.1.1.124 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glucodextran_B | 0.63 | 51.0 | 4.25e-01 | 96.0% | 50.0% |
| 2995054 | 10.2.1.54 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid_N | 0.63 | 50.0 | 3.34e-01 | 90.0% | 40.1% |
| 3778406 | 11.1.1.946 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2, Ig_3 | 0.63 | 52.0 | 3.51e-01 | 92.0% | 27.4% |
| 3902170 | 10.3.1.2 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q | 0.63 | 52.0 | 3.98e-01 | 96.0% | 40.0% |
| 5047312 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 51.0 | 4.22e-01 | 90.0% | 52.2% |
| 3752792 | 11.1.1.178 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 | 0.63 | 52.0 | 4.30e-01 | 92.0% | 55.6% |
| 3880780 | 11.1.1.463 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_C17orf99 | 0.63 | 53.0 | 4.35e-01 | 96.0% | 52.6% |
| 4942250 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.63 | 52.0 | 4.27e-01 | 96.0% | 49.5% |
| 2449450 | 11.1.1.178 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 | 0.63 | 51.0 | 3.43e-01 | 92.0% | 24.9% |
| 4945949 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 53.0 | 4.18e-01 | 94.0% | 45.7% |
| 4967715 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 49.0 | 4.27e-01 | 92.0% | 55.0% |
| 3935475 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 53.0 | 3.35e-01 | 94.0% | 25.0% |
| 184942 | 10.2.1.56 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › P2_N | 0.62 | 52.0 | 3.80e-01 | 94.0% | 56.0% |
| 5077362 | 11.1.1.246 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_7 | 0.62 | 51.0 | 4.24e-01 | 92.0% | 51.1% |
| 5050310 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 52.0 | 4.28e-01 | 94.0% | 50.5% |
| 4941706 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 50.0 | 4.09e-01 | 90.0% | 49.5% |
| 5083351 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.62 | 50.0 | 3.69e-01 | 96.0% | 46.0% |
| 4469838 | 10.32.1.215 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF29167 | 0.62 | 53.0 | 3.70e-01 | 98.0% | 41.8% |
| 1753 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 50.0 | 4.10e-01 | 92.0% | 52.6% |
| 3992824 | 11.1.1.532 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C6 | 0.61 | 49.0 | 4.13e-01 | 92.0% | 55.6% |
| 4649099 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.61 | 48.0 | 3.47e-01 | 88.0% | 58.0% |
| 4982764 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.61 | 52.0 | 4.07e-01 | 96.0% | 50.9% |
| 5060542 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.61 | 52.0 | 4.26e-01 | 96.0% | 55.8% |
| 5001518 | 11.1.1.246 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_7 | 0.61 | 52.0 | 4.30e-01 | 94.0% | 53.3% |
| 3213885 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.61 | 53.0 | 4.16e-01 | 96.0% | 61.0% |
| 3244813 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.61 | 53.0 | 3.90e-01 | 98.0% | 77.0% |
| 4883559 | 10.2.1.33 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Pox_Rif | 0.61 | 47.0 | 3.20e-01 | 90.0% | 42.9% |
| 4060911 | 4004.1.1.3 ↗ | beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD_kinase_C | 0.60 | 51.0 | 3.69e-01 | 100.0% | 87.5% |
| 3471296 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.60 | 50.0 | 3.81e-01 | 96.0% | 48.5% |
| 3193810 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.60 | 51.0 | 3.64e-01 | 94.0% | 39.4% |
| 1002416 | 2492.1.1.5 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › AICARFT_IMPCHas | 0.59 | 46.0 | 3.35e-01 | 92.0% | 28.2% |
| 3540693 | 11.1.1.18 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LTD | 0.59 | 49.0 | 3.85e-01 | 94.0% | 62.7% |
| 4850052 | 10.2.1.54 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid_N | 0.59 | 46.0 | 3.14e-01 | 90.0% | 44.8% |
| 4072109 | 2492.1.1.5 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › AICARFT_IMPCHas | 0.59 | 45.0 | 3.36e-01 | 92.0% | 29.7% |
| 5077152 | 11.1.1.246 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_7 | 0.58 | 49.0 | 4.01e-01 | 94.0% | 53.7% |
| 4238754 | 223.3.1.7 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Glutaminase | 0.58 | 42.0 | 3.01e-01 | 78.0% | 52.9% |
| 4958377 | 822.1.1.2 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF_2 | 0.58 | 41.0 | 4.17e-01 | 88.0% | 81.2% |
| 1155554 | 2492.1.1.5 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › AICARFT_IMPCHas | 0.58 | 46.0 | 3.25e-01 | 94.0% | 52.8% |
| 5062356 | 2492.1.1.5 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › AICARFT_IMPCHas | 0.58 | 47.0 | 3.18e-01 | 96.0% | 44.7% |
| 2389747 | 10.2.1.33 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Pox_Rif | 0.57 | 47.0 | 3.17e-01 | 96.0% | 42.7% |
| 1826980 | 10.32.1.52 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GH115_C | 0.54 | 44.0 | 3.15e-01 | 100.0% | 33.5% |
| 119236 | 3125.1.1.1 ↗ | alpha arrays › Asl3597 › Asl3597 › Asl3597 › CRR7 | 0.54 | 41.0 | 3.54e-01 | 92.0% | 88.3% |
| 3390573 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.53 | 42.0 | 4.05e-01 | 92.0% | 83.1% |
D2
medium
residues 1-104
Domain cluster:
rep: BML_08182015_1_5m_scaffold_15_prodigal-single.1__X__X__00127__D123-201
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5llmA00 | 1.10.3860.10 | Mainly Alpha › Orthogonal Bundle › Proton glutamate symport protein › Sodium:dicarboxylate symporter | 0.59 | 46.0 | 3.12e-01 | 84.6% | 86.2% |
| 3foeA02 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.51 | 26.0 | 3.00e-01 | 91.3% | 68.1% |
| 1xfiA02 | 1.20.1700.10 | Mainly Alpha › Up-down Bundle › AF1104-like › AF1104-like | 0.50 | 37.0 | 3.93e-01 | 87.5% | 91.1% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3720601 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.58 | 35.0 | 3.84e-01 | 95.2% | 72.9% |
| 5046309 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.56 | 33.0 | 3.48e-01 | 99.0% | 62.1% |
| 5046267 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.52 | 34.0 | 3.17e-01 | 70.2% | 49.3% |
| 5026577 | 102.1.2.1 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase › HhH-GPD | 0.51 | 40.0 | 3.14e-01 | 85.6% | 90.2% |
D3
medium
residues 117-187
Domain cluster:
rep: Salt_Pond_R1_B_H2O_MG_scaffold_1_prodigal-single.1__X__X__00109__D22-91
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2jqqA00 | 1.20.58.1240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 45.0 | 3.40e-01 | 70.4% | 61.0% |
| 1f45B00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.61 | 43.0 | 3.38e-01 | 73.2% | 38.3% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3848799 | 3755.2.1.4 ↗ | alpha bundles › YscO-like › Flagellar FliJ protein › Flagellar FliJ protein › PF26143 | 0.85 | 73.0 | 5.78e-01 | 91.5% | 48.9% |
| 4026684 | 192.20.1.7 ↗ | alpha bundles › Long alpha-hairpin › helical hairpin domain in transcriptional anti-activator ExsD › helical hairpin domain in transcriptional anti-activator ExsD › PF26729 | 0.75 | 59.0 | 5.10e-01 | 84.5% | 56.2% |
| 3276221 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.72 | 65.0 | 5.15e-01 | 95.8% | 60.0% |
| 4934657 | 4323.1.1.0 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C | 0.64 | 56.0 | 4.30e-01 | 98.6% | 59.4% |
D4
medium
residues 389-444
D5
medium
residues 803-865
Domain cluster:
representative
CATH (44)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1z0jB00 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.88 | 62.0 | 6.86e-01 | 73.0% | 94.1% |
| 1hr5A00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.87 | 55.0 | 6.30e-01 | 71.4% | 85.4% |
| 2ic6A00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.87 | 60.0 | 5.75e-01 | 71.4% | 97.2% |
| 1lrzA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.86 | 60.0 | 6.07e-01 | 71.4% | 90.3% |
| 2jdiG01 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.86 | 60.0 | 6.17e-01 | 73.0% | 80.3% |
| 2qtfA02 | 6.10.250.2860 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.82 | 56.0 | 6.44e-01 | 73.0% | 95.7% |
| 7zm7601 | 1.20.120.1200 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ | 0.82 | 59.0 | 4.20e-01 | 74.6% | 65.3% |
| 2p06B00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.82 | 64.0 | 5.70e-01 | 84.1% | 73.9% |
| 3vkgB03 | 1.20.58.1120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dynein motor heavy chain, linker domain, subdomain 4 | 0.81 | 63.0 | 4.63e-01 | 82.5% | 48.7% |
| 3b2eF00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.81 | 57.0 | 5.79e-01 | 73.0% | 79.0% |
| 2oo2A00 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.81 | 57.0 | 5.30e-01 | 73.0% | 65.8% |
| 2crbA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.81 | 60.0 | 5.18e-01 | 79.4% | 63.9% |
| 4u1cA01 | 4.10.860.10 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain | 0.80 | 56.0 | 6.14e-01 | 74.6% | 88.5% |
| 2e5yA02 | 1.20.5.440 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › ATP synthase delta/epsilon subunit, C-terminal domain | 0.80 | 54.0 | 6.20e-01 | 71.4% | 97.8% |
| 2xzmO02 | 1.10.287.10 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding | 0.79 | 56.0 | 5.41e-01 | 74.6% | 80.0% |
| 2zueA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.78 | 55.0 | 4.38e-01 | 73.0% | 52.9% |
| 8fbnB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.78 | 62.0 | 4.13e-01 | 84.1% | 23.9% |
| 1vmgA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.78 | 62.0 | 5.67e-01 | 85.7% | 69.5% |
| 2rpaA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.77 | 58.0 | 5.39e-01 | 79.4% | 79.2% |
| 4wzxA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.76 | 57.0 | 5.39e-01 | 79.4% | 80.0% |
| 1zhcA00 | 6.10.280.50 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.76 | 52.0 | 4.92e-01 | 71.4% | 64.5% |
| 3t9jA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.75 | 65.0 | 4.93e-01 | 95.2% | 84.0% |
| 3q4oA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.72 | 65.0 | 4.68e-01 | 98.4% | 80.5% |
| 4yonA01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.71 | 62.0 | 4.23e-01 | 96.8% | 63.0% |
| 1dpsA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.70 | 59.0 | 4.40e-01 | 93.7% | 75.5% |
| 1zb1A00 | 1.25.40.280 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › alix/aip1 like domains | 0.70 | 59.0 | 3.63e-01 | 92.1% | 31.6% |
| 3l9fA02 | 6.10.140.1570 | Special › Helix non-globular › Helix Hairpins › | 0.70 | 60.0 | 5.47e-01 | 92.1% | 92.6% |
| 2e9xA01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 49.0 | 4.02e-01 | 77.8% | 60.2% |
| 7bi4A01 | 1.25.40.70 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Phosphatidylinositol 3-kinase, accessory domain (PIK) | 0.67 | 61.0 | 4.26e-01 | 98.4% | 57.0% |
| 4h63H01 | 1.20.58.1710 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 46.0 | 4.44e-01 | 73.0% | 86.1% |
| 1e52A00 | 4.10.860.10 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain | 0.66 | 42.0 | 4.40e-01 | 71.4% | 73.2% |
| 4iggA01 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.66 | 46.0 | 4.52e-01 | 73.0% | 70.1% |
| 3h36A00 | 1.10.10.400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain | 0.65 | 49.0 | 4.61e-01 | 82.5% | 88.5% |
| 5b1aC01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.65 | 44.0 | 4.32e-01 | 71.4% | 66.2% |
| 3nkzA00 | 1.20.58.380 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit. | 0.65 | 47.0 | 4.05e-01 | 76.2% | 69.1% |
| 1n1cA02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.64 | 46.0 | 4.33e-01 | 79.4% | 78.0% |
| 2yxhA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.64 | 48.0 | 4.08e-01 | 84.1% | 54.9% |
| 2yxyA01 | 1.10.287.880 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Hypothetical protein YfhH domain | 0.62 | 45.0 | 4.87e-01 | 92.1% | 100.0% |
| 2mpkA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.62 | 47.0 | 4.55e-01 | 85.7% | 87.8% |
| 4e4eA01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.60 | 42.0 | 4.09e-01 | 74.6% | 66.2% |
| 1luwA01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.58 | 41.0 | 4.12e-01 | 76.2% | 75.0% |
| 6vynC01 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.58 | 47.0 | 4.53e-01 | 93.7% | 81.1% |
| 2klqA00 | 1.20.58.870 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 47.0 | 3.97e-01 | 98.4% | 91.2% |
| 2lw1A00 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.56 | 41.0 | 3.84e-01 | 87.3% | 61.2% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4975050 | 3843.1.1.0 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K | 0.89 | 61.0 | 5.71e-01 | 71.4% | 64.0% |
| 3718848 | 1132.1.1.0 ↗ | extended segments › Mitochondrial complex I, B16.6 subunit › Mitochondrial complex I, B16.6 subunit › Mitochondrial complex I, B16.6 subunit | 0.87 | 60.0 | 4.93e-01 | 71.4% | 42.9% |
| 3738678 | 3343.1.1.0 ↗ | alpha complex topology › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) | 0.85 | 59.0 | 4.56e-01 | 71.4% | 41.6% |
| 4324075 | 192.11.1.1 ↗ | alpha bundles › Long alpha-hairpin › C-terminal UvrC-binding domain of UvrB › C-terminal UvrC-binding domain of UvrB › UVR | 0.84 | 59.0 | 6.63e-01 | 73.0% | 100.0% |
| 4269685 | 192.11.1.1 ↗ | alpha bundles › Long alpha-hairpin › C-terminal UvrC-binding domain of UvrB › C-terminal UvrC-binding domain of UvrB › UVR | 0.84 | 63.0 | 6.34e-01 | 79.4% | 84.1% |
| 3252144 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.84 | 63.0 | 6.12e-01 | 79.4% | 87.1% |
| 4930533 | 3843.1.1.6 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › MrpF_PhaF | 0.84 | 57.0 | 5.26e-01 | 71.4% | 56.2% |
| 4248599 | 192.6.1.1 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain › ATP-synt_DE | 0.82 | 58.0 | 6.49e-01 | 73.0% | 95.8% |
| 3960783 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.82 | 58.0 | 5.30e-01 | 73.0% | 83.7% |
| 3834457 | 7026.1.1.0 ↗ | beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 | 0.82 | 56.0 | 5.29e-01 | 71.4% | 69.3% |
| 4552883 | 192.6.1.0 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain | 0.79 | 55.0 | 6.13e-01 | 74.6% | 93.9% |
| 3923922 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.78 | 59.0 | 5.55e-01 | 79.4% | 82.7% |
| 5070758 | 109.4.1.5 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1 | 0.78 | 56.0 | 4.54e-01 | 82.5% | 42.7% |
| 5058842 | 604.5.1.0 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) | 0.78 | 58.0 | 5.13e-01 | 79.4% | 83.3% |
| 4208136 | 192.6.1.0 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain | 0.78 | 53.0 | 6.08e-01 | 74.6% | 100.0% |
| 4297392 | 192.6.1.1 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain › ATP-synt_DE | 0.77 | 54.0 | 5.91e-01 | 74.6% | 92.0% |
| 4003919 | 109.54.1.14 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › DUF7951 | 0.76 | 66.0 | 4.47e-01 | 95.2% | 54.2% |
| 4089556 | 7575.1.1.6 ↗ | a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › Peptidase_C80 | 0.76 | 66.0 | 4.24e-01 | 96.8% | 64.4% |
| 4960003 | 150.1.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Ferritin | 0.74 | 64.0 | 5.00e-01 | 93.7% | 83.1% |
| 3668467 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.73 | 54.0 | 3.65e-01 | 79.4% | 23.5% |
| 3781156 | 109.4.1.70 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CID | 0.72 | 57.0 | 3.90e-01 | 85.7% | 26.5% |
| 2898272 | 3812.1.1.1 ↗ | alpha bundles › Type III secretion protein YscE › Type III secretion protein YscE › Type III secretion protein YscE › T3SS_needle_E | 0.71 | 60.0 | 5.68e-01 | 88.9% | 84.7% |
| 3203044 | 4156.1.1.0 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like | 0.69 | 59.0 | 4.56e-01 | 93.7% | 65.2% |
| 4620002 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.69 | 47.0 | 4.34e-01 | 73.0% | 54.1% |
| 3639843 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.68 | 61.0 | 3.64e-01 | 100.0% | 26.0% |
| 4202640 | 192.6.1.1 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain › ATP-synt_DE | 0.68 | 54.0 | 5.74e-01 | 92.1% | 98.2% |
| 3869791 | 109.4.1.2393 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, VPS15-like_hel, PF29896 | 0.68 | 60.0 | 3.38e-01 | 100.0% | 19.0% |
| 3709846 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 55.0 | 4.23e-01 | 100.0% | 90.6% |
| 4583117 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.65 | 54.0 | 4.32e-01 | 90.5% | 54.2% |
| 3929119 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 53.0 | 3.77e-01 | 100.0% | 81.8% |
| 4032991 | 6072.1.1.0 ↗ | alpha arrays › Transmembrane domain of envelope protein E › Transmembrane domain of envelope protein E › Transmembrane domain of envelope protein E | 0.62 | 43.0 | 3.87e-01 | 74.6% | 50.5% |
| 3480452 | 7515.1.1.0 ↗ | a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like | 0.60 | 51.0 | 3.13e-01 | 95.2% | 58.1% |
| 3576223 | 604.33.1.1 ↗ | alpha bundles › Spectrin repeat-like › Repulsive guidance molecule (RGM) N-terminal domain › Repulsive guidance molecule (RGM) N-terminal domain › RGM_N | 0.57 | 41.0 | 3.97e-01 | 79.4% | 74.3% |
| None | — | 0.57 | 47.0 | 2.84e-01 | 96.8% | 63.7% |