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BML_08182015_1_5m_scaffold_19_prodigal-single.1__X__X__00143
Bact-VirBML_08182015_1_5m_scaffold_19_prodigal-single.1__X__X__00143
Identity
- Kingdom:
- phage
Quality
89.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-66
Domain cluster:
rep: MK387337.2__QAU04497.1__Va1_144__00054__D74-127
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1jsgA00 | 2.40.15.10 | Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 | 0.68 | 54.0 | 4.41e-01 | 89.5% | 91.0% |
| 1jqpA01 | 2.40.128.80 | Mainly Beta › Beta Barrel › Lipocalin › Cathepsin C, exclusion domain | 0.65 | 55.0 | 4.56e-01 | 100.0% | 93.8% |
| 2jn4A00 | 2.40.50.240 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NifT/FixU-like | 0.65 | 50.0 | 4.83e-01 | 84.2% | 83.3% |
| 7q04F01 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.64 | 44.0 | 3.58e-01 | 71.9% | 97.2% |
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.64 | 46.0 | 4.85e-01 | 100.0% | 86.5% |
| 3nbxX04 | 2.40.128.430 | Mainly Beta › Beta Barrel › Lipocalin › | 0.63 | 54.0 | 4.51e-01 | 100.0% | 68.2% |
| 3ic8A01 | 3.40.30.110 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › | 0.60 | 48.0 | 3.41e-01 | 100.0% | 28.8% |
| 8aimG01 | 3.10.450.20 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor | 0.58 | 47.0 | 4.23e-01 | 91.2% | 100.0% |
| 1w0pA03 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 40.0 | 2.90e-01 | 75.4% | 41.7% |
| 3rwxA01 | 2.40.128.340 | Mainly Beta › Beta Barrel › Lipocalin › | 0.57 | 48.0 | 3.92e-01 | 100.0% | 86.7% |
| 3bm4A00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.57 | 40.0 | 2.79e-01 | 73.7% | 64.0% |
| 3nrlA00 | 2.40.10.390 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.56 | 36.0 | 3.51e-01 | 100.0% | 55.9% |
| 2p4oA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.56 | 42.0 | 2.74e-01 | 86.0% | 25.3% |
| 2ra6C00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 44.0 | 3.44e-01 | 94.7% | 49.0% |
| 3ednA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.55 | 47.0 | 3.53e-01 | 93.0% | 54.5% |
| 2cudA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 47.0 | 4.28e-01 | 100.0% | 69.6% |
| 5fpwA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.55 | 47.0 | 3.03e-01 | 100.0% | 25.7% |
| 1w0pA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 38.0 | 2.79e-01 | 75.4% | 44.6% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 42.0 | 4.14e-01 | 100.0% | 79.0% |
| 1x6bA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 46.0 | 4.48e-01 | 100.0% | 85.9% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 44.0 | 4.36e-01 | 100.0% | 83.9% |
| 3n6rA03 | 3.30.700.30 | Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › | 0.54 | 45.0 | 3.57e-01 | 100.0% | 59.4% |
| 2pb2B01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 43.0 | 3.26e-01 | 89.5% | 94.4% |
| 1lckA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 46.0 | 4.57e-01 | 100.0% | 93.2% |
| 3wa1A01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.53 | 44.0 | 3.35e-01 | 100.0% | 93.1% |
| 2rqrA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 45.0 | 3.58e-01 | 100.0% | 47.1% |
| 3t91B00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.52 | 38.0 | 2.54e-01 | 100.0% | 20.1% |
| 2kr0A01 | 2.30.29.70 | Mainly Beta › Roll › PH-domain like › Proteasomal ubiquitin receptor Rpn13/ADRM1 | 0.52 | 43.0 | 3.59e-01 | 100.0% | 74.3% |
| 2n6eA00 | 3.40.1530.20 | Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1805 › Protein of unknown function (DUF1491) | 0.51 | 44.0 | 3.57e-01 | 96.5% | 86.4% |
| 1iucA00 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.51 | 44.0 | 2.81e-01 | 100.0% | 90.7% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5018422 | 209.1.2.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › Sulfatase-modifying factor-like › FGE-sulfatase | 0.75 | 52.0 | 3.39e-01 | 73.7% | 99.6% |
| 3749834 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.69 | 56.0 | 5.71e-01 | 100.0% | 90.9% |
| 3486885 | 9.8.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Dipeptidyl peptidase I (cathepsin C), exclusion domain › Dipeptidyl peptidase I (cathepsin C), exclusion domain › CathepsinC_exc | 0.67 | 57.0 | 4.70e-01 | 100.0% | 88.2% |
| 3745132 | 9.8.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Dipeptidyl peptidase I (cathepsin C), exclusion domain › Dipeptidyl peptidase I (cathepsin C), exclusion domain › CathepsinC_exc | 0.67 | 57.0 | 4.47e-01 | 100.0% | 80.8% |
| 3173166 | 239.3.1.0 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain | 0.67 | 57.0 | 4.13e-01 | 100.0% | 53.7% |
| 3470263 | 9.8.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Dipeptidyl peptidase I (cathepsin C), exclusion domain › Dipeptidyl peptidase I (cathepsin C), exclusion domain | 0.67 | 55.0 | 4.63e-01 | 100.0% | 89.1% |
| 3286461 | 9.4.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains | 0.64 | 53.0 | 4.59e-01 | 98.2% | 70.5% |
| 5077687 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.62 | 42.0 | 2.67e-01 | 70.2% | 25.3% |
| 4528716 | 3784.1.1.0 ↗ | a+b two layers › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related | 0.62 | 50.0 | 4.18e-01 | 93.0% | 93.3% |
| 3451552 | 375.1.4.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain | 0.61 | 45.0 | 4.59e-01 | 100.0% | 83.3% |
| 3535572 | 239.3.1.1 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain › Fasciclin | 0.60 | 51.0 | 3.93e-01 | 100.0% | 65.0% |
| 5037697 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.58 | 47.0 | 3.23e-01 | 94.7% | 83.9% |
| 3189984 | 239.3.1.1 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain › Fasciclin | 0.57 | 48.0 | 3.70e-01 | 100.0% | 63.4% |
| 3474675 | 4291.1.1.1 ↗ | beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP | 0.56 | 46.0 | 2.93e-01 | 94.7% | 40.9% |
| 3396897 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.56 | 41.0 | 4.01e-01 | 78.9% | 73.0% |
| 3656952 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 46.0 | 3.81e-01 | 100.0% | 64.3% |
| 3623786 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.55 | 45.0 | 4.39e-01 | 100.0% | 81.5% |
| 3707023 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 43.0 | 3.59e-01 | 86.0% | 57.0% |
| 158943 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.54 | 46.0 | 4.17e-01 | 100.0% | 69.6% |
| 3479037 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 46.0 | 4.15e-01 | 100.0% | 68.8% |
| 4990940 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.54 | 46.0 | 4.07e-01 | 100.0% | 65.9% |
| 2464247 | 4.8.1.2 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow | 0.53 | 41.0 | 3.98e-01 | 93.0% | 74.2% |
| 5044011 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.52 | 33.0 | 3.09e-01 | 100.0% | 48.0% |
| 3310306 | 1.1.1.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › TAXi_C+TAXi_N | 0.52 | 40.0 | 2.60e-01 | 87.7% | 28.9% |
| 3230503 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.52 | 45.0 | 3.16e-01 | 100.0% | 36.8% |
| 3722019 | 6.1.1.0 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil | 0.51 | 44.0 | 3.39e-01 | 100.0% | 80.0% |
| 5050188 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 43.0 | 3.80e-01 | 100.0% | 66.7% |
| 3593477 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 41.0 | 3.14e-01 | 100.0% | 51.9% |