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BML_08182015_1_5m_scaffold_19_prodigal-single.1__X__X__00243
Bact-VirBML_08182015_1_5m_scaffold_19_prodigal-single.1__X__X__00243
Identity
- Kingdom:
- phage
Quality
89.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 190-340
D2
medium
residues 33-139
Domain cluster:
rep: NC_031097.1__YP_009289692.1__SEA_ZIRINKA_32__00032__D2-96
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4i84A00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.84 | 77.0 | 5.51e-01 | 100.0% | 71.6% |
| 2odlA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.83 | 76.0 | 5.12e-01 | 100.0% | 69.1% |
| 1rwrA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.81 | 74.0 | 5.32e-01 | 100.0% | 68.4% |
| 3lycA00 | 2.160.20.120 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.78 | 71.0 | 5.45e-01 | 100.0% | 81.3% |
| 3ljyA00 | 2.160.20.120 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.78 | 71.0 | 5.42e-01 | 100.0% | 80.3% |
| 4kh3A00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.76 | 69.0 | 4.45e-01 | 100.0% | 29.1% |
| 3petA00 | 2.160.20.120 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.74 | 67.0 | 5.28e-01 | 100.0% | 88.1% |
| 3bh7B01 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.73 | 66.0 | 5.38e-01 | 98.1% | 89.1% |
| 4w8qA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.73 | 65.0 | 5.08e-01 | 100.0% | 85.9% |
| 3jx8A00 | 2.160.20.120 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.70 | 63.0 | 4.82e-01 | 100.0% | 88.7% |
| 2yuhA01 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.69 | 61.0 | 5.29e-01 | 100.0% | 87.8% |
| 1k4zA00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.69 | 62.0 | 5.48e-01 | 100.0% | 94.3% |
| 2b0rB00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.68 | 61.0 | 5.40e-01 | 100.0% | 91.8% |
| 4v02C00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.68 | 55.0 | 5.23e-01 | 86.0% | 91.8% |
| 5jlvC00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.65 | 53.0 | 5.55e-01 | 87.9% | 97.9% |
ECOD (45)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5026672 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.90 | 86.0 | 5.84e-01 | 100.0% | 44.3% |
| 5048136 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.90 | 86.0 | 6.31e-01 | 100.0% | 59.2% |
| 4971789 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.90 | 85.0 | 7.91e-01 | 100.0% | 96.2% |
| 5037365 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.89 | 84.0 | 6.40e-01 | 100.0% | 69.8% |
| 4159087 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.89 | 84.0 | 6.34e-01 | 100.0% | 67.4% |
| 5023405 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.87 | 82.0 | 6.25e-01 | 100.0% | 65.6% |
| 4463206 | 208.1.1.45 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Bactofilin | 0.86 | 81.0 | 6.15e-01 | 100.0% | 62.6% |
| 5040588 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.84 | 72.0 | 6.81e-01 | 90.7% | 82.4% |
| 4073166 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.84 | 78.0 | 4.57e-01 | 100.0% | 18.3% |
| 5007613 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.83 | 77.0 | 7.25e-01 | 100.0% | 83.6% |
| 3798319 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.82 | 76.0 | 6.88e-01 | 100.0% | 97.9% |
| 3611300 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.82 | 76.0 | 4.69e-01 | 100.0% | 24.9% |
| 5002393 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.81 | 71.0 | 6.83e-01 | 93.5% | 94.2% |
| 4378528 | 207.14.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin | 0.80 | 69.0 | 7.17e-01 | 91.6% | 99.0% |
| 3513692 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.80 | 76.0 | 5.29e-01 | 100.0% | 46.6% |
| 1720156 | 207.14.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin | 0.80 | 71.0 | 7.22e-01 | 95.3% | 99.0% |
| 5017838 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.79 | 73.0 | 6.46e-01 | 100.0% | 97.3% |
| 3165270 | 207.2.1.10 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pertactin | 0.79 | 72.0 | 5.39e-01 | 100.0% | 85.8% |
| 3769689 | 207.14.1.3 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › DUF5585 | 0.79 | 54.0 | 6.27e-01 | 81.3% | 100.0% |
| 4932011 | 207.14.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin | 0.78 | 68.0 | 6.64e-01 | 92.5% | 93.9% |
| 3590719 | 207.2.1.35 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › DUF4097 | 0.77 | 70.0 | 5.18e-01 | 100.0% | 90.7% |
| 4964741 | 207.14.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin | 0.77 | 58.0 | 6.29e-01 | 79.4% | 100.0% |
| 3877533 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.77 | 61.0 | 6.54e-01 | 100.0% | 100.0% |
| 3710820 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.76 | 56.0 | 4.60e-01 | 88.8% | 43.2% |
| 3932133 | 208.7.1.4 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Grass antifreeze protein › Grass antifreeze protein › PF28756 | 0.75 | 69.0 | 6.79e-01 | 100.0% | 96.5% |
| 3567623 | 208.7.1.5 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Grass antifreeze protein › Grass antifreeze protein › Epiglycanin_TR | 0.75 | 70.0 | 6.02e-01 | 100.0% | 79.4% |
| 5050561 | 207.7.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Alpha subunit of glutamate synthase-C › Alpha subunit of glutamate synthase-C | 0.75 | 68.0 | 4.98e-01 | 100.0% | 87.1% |
| 3560250 | 208.2.1.7 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain › Epiglycanin_TR | 0.75 | 69.0 | 6.20e-01 | 100.0% | 86.9% |
| 4949774 | 208.7.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Grass antifreeze protein › Grass antifreeze protein | 0.75 | 68.0 | 6.13e-01 | 100.0% | 85.5% |
| 4986204 | 207.7.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Alpha subunit of glutamate synthase-C › Alpha subunit of glutamate synthase-C › GXGXG | 0.75 | 67.0 | 5.47e-01 | 100.0% | 83.5% |
| 5022985 | 207.7.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Alpha subunit of glutamate synthase-C › Alpha subunit of glutamate synthase-C › GXGXG | 0.75 | 67.0 | 5.30e-01 | 100.0% | 65.0% |
| 3254394 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.74 | 68.0 | 4.20e-01 | 100.0% | 21.7% |
| 998972 | 207.2.1.18 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › DUF2807 | 0.74 | 67.0 | 5.28e-01 | 100.0% | 88.1% |
| 4406918 | 207.6.1.16 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › FARP | 0.73 | 66.0 | 6.23e-01 | 100.0% | 90.0% |
| 3596944 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.73 | 66.0 | 5.82e-01 | 100.0% | 68.4% |
| 3992830 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.72 | 66.0 | 4.91e-01 | 100.0% | 65.9% |
| 3798316 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.72 | 66.0 | 4.45e-01 | 100.0% | 51.7% |
| 3485767 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.71 | 64.0 | 4.11e-01 | 100.0% | 32.7% |
| 5010532 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.70 | 63.0 | 4.33e-01 | 100.0% | 68.0% |
| 3305986 | 208.7.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Grass antifreeze protein › Grass antifreeze protein | 0.70 | 64.0 | 6.28e-01 | 99.1% | 92.2% |
| 3414694 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.70 | 63.0 | 3.74e-01 | 100.0% | 28.2% |
| 5078382 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.70 | 62.0 | 4.52e-01 | 100.0% | 79.3% |
| 3763790 | 208.2.1.6 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain › SVS_QK | 0.69 | 65.0 | 5.93e-01 | 100.0% | 85.9% |
| 3708278 | 208.7.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Grass antifreeze protein › Grass antifreeze protein | 0.69 | 56.0 | 5.90e-01 | 100.0% | 96.8% |
| 3246091 | 389.1.1.157 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › Epiglycanin_TR | 0.63 | 55.0 | 4.63e-01 | 94.4% | 96.7% |