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BML_08182015_1_5m_scaffold_19_prodigal-single.1__X__X__00373
Bact-VirBML_08182015_1_5m_scaffold_19_prodigal-single.1__X__X__00373
Identity
- Kingdom:
- phage
Quality
89.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-46
Domain cluster:
representative
CATH (61)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2p0vA01 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.90 | 80.0 | 4.52e-01 | 100.0% | 9.8% |
| 1yxrA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.90 | 79.0 | 6.44e-01 | 100.0% | 55.4% |
| 2vyiA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.90 | 71.0 | 4.89e-01 | 88.1% | 28.1% |
| 4h63K00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.88 | 77.0 | 5.84e-01 | 100.0% | 42.9% |
| 1cxzB00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.86 | 70.0 | 5.56e-01 | 100.0% | 45.3% |
| 3fxdB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.86 | 76.0 | 6.83e-01 | 100.0% | 86.2% |
| 7xcnM01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.85 | 61.0 | 4.92e-01 | 95.2% | 41.0% |
| 1lrzA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.85 | 73.0 | 6.41e-01 | 97.6% | 100.0% |
| 4iggA01 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.83 | 71.0 | 6.14e-01 | 100.0% | 94.0% |
| 3dkqA02 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.82 | 69.0 | 6.76e-01 | 97.6% | 87.2% |
| 6j7xA01 | 1.25.40.120 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Protein prenylyltransferase | 0.82 | 67.0 | 4.05e-01 | 92.9% | 14.5% |
| 2lqgA00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.82 | 65.0 | 4.54e-01 | 100.0% | 27.5% |
| 4e6nA02 | 6.10.140.1010 | Special › Helix non-globular › Helix Hairpins › | 0.80 | 69.0 | 5.98e-01 | 100.0% | 74.2% |
| 2nn4A00 | 1.10.287.760 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like | 0.80 | 64.0 | 5.74e-01 | 92.9% | 64.5% |
| 3d36B02 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.79 | 67.0 | 5.96e-01 | 97.6% | 86.9% |
| 5jrcA00 | 1.20.58.2140 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.78 | 65.0 | 4.26e-01 | 100.0% | 22.0% |
| 7qocA01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.78 | 64.0 | 4.25e-01 | 100.0% | 22.5% |
| 5je8B02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.77 | 64.0 | 4.57e-01 | 100.0% | 31.2% |
| 1j1jA02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.76 | 61.0 | 5.02e-01 | 100.0% | 48.2% |
| 2e5yA02 | 1.20.5.440 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › ATP synthase delta/epsilon subunit, C-terminal domain | 0.76 | 65.0 | 6.38e-01 | 100.0% | 100.0% |
| 1h7cA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.76 | 63.0 | 4.79e-01 | 97.6% | 80.6% |
| 5c8aA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.75 | 62.0 | 5.23e-01 | 100.0% | 56.4% |
| 4biuE01 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.74 | 59.0 | 4.75e-01 | 100.0% | 45.9% |
| 2dnxA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.74 | 59.0 | 4.33e-01 | 100.0% | 32.3% |
| 3k2nA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.73 | 56.0 | 3.71e-01 | 85.7% | 89.3% |
| 2yqyA00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.72 | 61.0 | 4.41e-01 | 100.0% | 61.9% |
| 3q18A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.72 | 56.0 | 4.24e-01 | 100.0% | 33.6% |
| 1np7A02 | 1.25.40.80 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.72 | 60.0 | 4.47e-01 | 100.0% | 37.8% |
| 3t9oB00 | 1.20.120.30 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartate receptor, ligand-binding domain | 0.72 | 56.0 | 4.29e-01 | 100.0% | 35.0% |
| 2rp4A00 | 6.10.280.60 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain | 0.71 | 56.0 | 4.98e-01 | 100.0% | 59.2% |
| 3ufeA02 | 1.20.58.1950 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 51.0 | 4.77e-01 | 83.3% | 62.3% |
| 3w6zA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.70 | 60.0 | 4.37e-01 | 100.0% | 42.1% |
| 3txsC01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.70 | 57.0 | 4.90e-01 | 100.0% | 92.0% |
| 3t69A02 | 3.30.420.310 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 2-keto-3-deoxy-galactonokinase, C-terminal domain | 0.70 | 57.0 | 3.69e-01 | 100.0% | 19.0% |
| 5xfaA04 | 1.20.1440.230 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain | 0.70 | 56.0 | 4.58e-01 | 95.2% | 47.1% |
| 6q9jB02 | 1.20.1440.230 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain | 0.69 | 58.0 | 4.69e-01 | 100.0% | 94.3% |
| 2gf2A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.69 | 57.0 | 4.07e-01 | 100.0% | 29.9% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 55.0 | 4.83e-01 | 100.0% | 61.6% |
| 2rfqB01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.68 | 58.0 | 4.36e-01 | 100.0% | 43.1% |
| 4fzwA02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.68 | 55.0 | 5.08e-01 | 97.6% | 79.3% |
| 4im9B00 | 1.10.860.10 | Mainly Alpha › Orthogonal Bundle › DNAb Helicase; Chain A › DNAb Helicase; Chain A | 0.68 | 56.0 | 3.93e-01 | 92.9% | 29.6% |
| 2pvqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.67 | 57.0 | 4.38e-01 | 100.0% | 44.3% |
| 5lb3B02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.67 | 57.0 | 3.65e-01 | 100.0% | 33.8% |
| 3w8hB00 | 1.10.12.70 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › | 0.67 | 55.0 | 4.91e-01 | 100.0% | 63.6% |
| 2au5A00 | 1.20.120.590 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › EF2947-like | 0.66 | 54.0 | 3.85e-01 | 92.9% | 88.4% |
| 2qyuA02 | 1.25.40.300 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Putative secreted effector protein | 0.66 | 55.0 | 3.59e-01 | 97.6% | 26.2% |
| 5m9dA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.66 | 54.0 | 3.87e-01 | 100.0% | 30.4% |
| 4wr4A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.66 | 52.0 | 4.11e-01 | 100.0% | 43.8% |
| 4flbA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.65 | 52.0 | 3.79e-01 | 97.6% | 30.5% |
| 5ojcA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.65 | 56.0 | 3.86e-01 | 100.0% | 37.0% |
| 4jylA02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.64 | 51.0 | 4.97e-01 | 97.6% | 93.9% |
| 2keyA00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.63 | 51.0 | 3.93e-01 | 100.0% | 75.0% |
| 4iluA02 | 1.20.58.1290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › CarD-like, C-terminal domain | 0.62 | 51.0 | 3.84e-01 | 95.2% | 35.1% |
| 5dxuA03 | 1.25.40.70 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Phosphatidylinositol 3-kinase, accessory domain (PIK) | 0.62 | 47.0 | 3.18e-01 | 85.7% | 19.4% |
| 1rz4A01 | 1.25.40.250 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat; domain 1 | 0.62 | 50.0 | 3.67e-01 | 95.2% | 32.5% |
| 1ailA00 | 1.10.287.10 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding | 0.61 | 47.0 | 4.24e-01 | 100.0% | 60.0% |
| 3g0oA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.61 | 52.0 | 3.79e-01 | 100.0% | 35.5% |
| 2hepA00 | 1.10.287.540 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.60 | 45.0 | 4.57e-01 | 97.6% | 97.6% |
| 4ihuA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.59 | 48.0 | 3.16e-01 | 97.6% | 20.4% |
| 1go3F02 | 6.10.140.10 | Special › Helix non-globular › Helix Hairpins › | 0.58 | 41.0 | 4.00e-01 | 81.0% | 70.2% |
| 1vquA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.54 | 42.0 | 3.61e-01 | 95.2% | 53.7% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4103507 | 632.22.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › EzrA | 0.89 | 79.0 | 6.00e-01 | 100.0% | 44.2% |
| 3721864 | 616.1.1.0 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain | 0.86 | 76.0 | 6.55e-01 | 100.0% | 64.6% |
| 3348106 | 5076.2.1.10 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › PF29520 | 0.86 | 70.0 | 4.23e-01 | 100.0% | 14.4% |
| 5001019 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.85 | 74.0 | 4.84e-01 | 100.0% | 33.5% |
| 5006188 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.84 | 71.0 | 6.43e-01 | 100.0% | 70.0% |
| 3280846 | 5050.1.1.55 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr, MFS_1 | 0.84 | 72.0 | 4.08e-01 | 100.0% | 9.2% |
| 4077505 | 10.12.1.53 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_3 | 0.83 | 67.0 | 4.25e-01 | 95.2% | 18.2% |
| 4186632 | 4146.1.1.3 ↗ | alpha bundles › YqgQ-like › YqgQ-like › YqgQ-like › PKHD_C | 0.83 | 69.0 | 6.78e-01 | 97.6% | 91.1% |
| 4553862 | 4146.1.1.0 ↗ | alpha bundles › YqgQ-like › YqgQ-like › YqgQ-like | 0.83 | 68.0 | 6.74e-01 | 97.6% | 91.1% |
| 4076265 | 3390.1.1.0 ↗ | extended segments › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT | 0.81 | 68.0 | 6.56e-01 | 100.0% | 86.0% |
| 4959934 | 616.1.1.0 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain | 0.80 | 64.0 | 5.34e-01 | 90.5% | 60.0% |
| 4957171 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.80 | 67.0 | 5.92e-01 | 100.0% | 64.6% |
| 3284087 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.79 | 67.0 | 4.10e-01 | 100.0% | 17.3% |
| 4432304 | 3390.1.1.0 ↗ | extended segments › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT | 0.79 | 65.0 | 6.27e-01 | 100.0% | 86.0% |
| 3675439 | 5059.1.1.52 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › PAP2 | 0.78 | 66.0 | 4.65e-01 | 97.6% | 36.2% |
| 3401214 | 3755.3.1.345 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Hobbit | 0.77 | 63.0 | 4.44e-01 | 100.0% | 29.0% |
| 3733266 | 3352.1.1.19 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › Mannosyl_trans2 | 0.76 | 62.0 | 3.60e-01 | 100.0% | 10.1% |
| 3452409 | 375.1.1.261 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF30610 | 0.76 | 56.0 | 5.54e-01 | 100.0% | 77.8% |
| 5072337 | 5073.1.1.11 ↗ | alpha bundles › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain M › Cation_ATPase_C | 0.75 | 60.0 | 3.45e-01 | 100.0% | 9.0% |
| 3911382 | 109.4.1.95 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2 | 0.75 | 61.0 | 4.22e-01 | 100.0% | 50.0% |
| 3963155 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.75 | 59.0 | 5.15e-01 | 100.0% | 56.0% |
| 3414711 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.74 | 61.0 | 4.04e-01 | 100.0% | 22.6% |
| 162404 | 603.1.1.6 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin_2 | 0.74 | 59.0 | 4.33e-01 | 100.0% | 32.3% |
| 2555592 | 5069.1.1.3 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cyt_bd_oxida_I | 0.73 | 62.0 | 5.05e-01 | 100.0% | 50.6% |
| 4010637 | 3809.1.1.2 ↗ | alpha bundles › Uncharacterized protein CV0426 › Uncharacterized protein CV0426 › Uncharacterized protein CV0426 › Caudo_TAP | 0.73 | 61.0 | 5.28e-01 | 100.0% | 67.1% |
| 3724838 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.72 | 58.0 | 5.14e-01 | 100.0% | 60.0% |
| 3484950 | 605.8.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › BAS1536-like › BAS1536-like | 0.72 | 58.0 | 5.75e-01 | 100.0% | 93.3% |
| 3915619 | 7015.1.1.1 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › DHHC | 0.71 | 58.0 | 3.62e-01 | 92.9% | 15.9% |
| 3282037 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.71 | 63.0 | 3.80e-01 | 100.0% | 16.5% |
| 3775580 | 601.1.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › Vinculin | 0.69 | 55.0 | 4.80e-01 | 100.0% | 69.3% |
| 3975852 | 192.8.1.466 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › Caudo_TAP | 0.69 | 56.0 | 5.03e-01 | 100.0% | 64.6% |
| 3202914 | 3846.1.1.0 ↗ | alpha bundles › IcmR › IcmR › IcmR | 0.69 | 56.0 | 5.15e-01 | 100.0% | 70.0% |
| 3979204 | 605.2.1.8 ↗ | alpha duplicates or obligate multimers › ROP-like › Hypothetical protein D-63 › Hypothetical protein D-63 › Caudo_TAP | 0.69 | 56.0 | 4.81e-01 | 100.0% | 56.0% |
| 5027710 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 52.0 | 4.98e-01 | 85.7% | 70.0% |
| 2443879 | 507.1.1.2 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaG_DnaB_bind | 0.68 | 50.0 | 3.47e-01 | 100.0% | 24.5% |
| 4007897 | 3809.1.1.2 ↗ | alpha bundles › Uncharacterized protein CV0426 › Uncharacterized protein CV0426 › Uncharacterized protein CV0426 › Caudo_TAP | 0.68 | 55.0 | 4.85e-01 | 100.0% | 60.0% |
| 4009505 | 7079.1.1.1 ↗ | a+b complex topology › Phage tail fiber assembly protein › Phage tail fiber assembly protein › Phage tail fiber assembly protein › Caudo_TAP | 0.67 | 55.0 | 4.83e-01 | 100.0% | 60.0% |
| 4248498 | 507.1.1.2 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaG_DnaB_bind | 0.66 | 52.0 | 3.67e-01 | 88.1% | 27.7% |
| 4213502 | 4336.1.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF | 0.66 | 53.0 | 4.10e-01 | 95.2% | 36.4% |
| 3985321 | 3579.1.1.29 ↗ | extended segments › NADH-quinone oxidoreductase subunit J › NADH-quinone oxidoreductase subunit J › NADH-quinone oxidoreductase subunit J › ThrE_2 | 0.65 | 54.0 | 3.87e-01 | 100.0% | 31.7% |
| 393778 | 192.18.1.1 ↗ | alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like › T3SS_needle_F | 0.64 | 49.0 | 4.57e-01 | 100.0% | 68.3% |
| 4675076 | 192.19.1.1 ↗ | alpha bundles › Long alpha-hairpin › YnzC-like › YnzC-like › DUF896 | 0.64 | 50.0 | 4.36e-01 | 100.0% | 54.7% |
| 5040510 | 304.48.1.3 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B | 0.63 | 52.0 | 3.31e-01 | 100.0% | 17.6% |
| 4477969 | 192.19.1.1 ↗ | alpha bundles › Long alpha-hairpin › YnzC-like › YnzC-like › DUF896 | 0.63 | 53.0 | 5.02e-01 | 95.2% | 84.0% |
| 5061885 | 298.2.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › FwdE-like › FwdE-like | 0.63 | 55.0 | 3.53e-01 | 100.0% | 21.0% |
| 3719697 | 1021.1.1.0 ↗ | a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases | 0.63 | 52.0 | 3.89e-01 | 100.0% | 35.0% |
| 3163958 | 507.1.1.2 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaG_DnaB_bind | 0.62 | 51.0 | 3.71e-01 | 100.0% | 30.0% |
| 4542879 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.62 | 51.0 | 3.61e-01 | 100.0% | 31.0% |
| 4673830 | 192.19.1.1 ↗ | alpha bundles › Long alpha-hairpin › YnzC-like › YnzC-like › DUF896 | 0.61 | 50.0 | 4.23e-01 | 100.0% | 54.4% |
| 4186571 | 192.19.1.1 ↗ | alpha bundles › Long alpha-hairpin › YnzC-like › YnzC-like › DUF896 | 0.61 | 51.0 | 4.91e-01 | 100.0% | 84.0% |
| 3590808 | 192.19.1.1 ↗ | alpha bundles › Long alpha-hairpin › YnzC-like › YnzC-like › DUF896 | 0.61 | 52.0 | 4.95e-01 | 100.0% | 84.0% |
| 4633524 | 192.19.1.1 ↗ | alpha bundles › Long alpha-hairpin › YnzC-like › YnzC-like › DUF896 | 0.59 | 50.0 | 4.28e-01 | 97.6% | 58.6% |
| 3435472 | 376.1.4.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog | 0.54 | 41.0 | 3.60e-01 | 85.7% | 53.8% |