←Back to structures
BML_08182015_1_5m_scaffold_4_prodigal-single.1__X__X__00130
Bact-VirBML_08182015_1_5m_scaffold_4_prodigal-single.1__X__X__00130
Identity
- Kingdom:
- phage
Quality
65.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 131-208
Domain cluster:
rep: ALT_09252017_20_scaffold_29_prodigal-single.1__X__X__00313__D259-329
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yy3A02 | 2.40.10.240 | Mainly Beta › Beta Barrel › Thrombin, subunit H › QueA-like | 0.59 | 48.0 | 4.49e-01 | 100.0% | 70.7% |
| 4q63A00 | 2.40.10.430 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.52 | 42.0 | 4.03e-01 | 100.0% | 77.4% |
| 2vrwB02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 39.0 | 3.36e-01 | 82.1% | 55.4% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4631894 | 1.1.12.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins › Queuosine_synth | 0.63 | 49.0 | 4.32e-01 | 98.7% | 57.4% |
| 4157526 | 1.1.12.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins › Queuosine_synth | 0.61 | 48.0 | 4.19e-01 | 100.0% | 57.4% |
D2
high
residues 255-328
Domain cluster:
rep: ALT_09252017_20_scaffold_29_prodigal-single.1__X__X__00313__D259-329
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xffA00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.57 | 46.0 | 3.30e-01 | 90.5% | 90.8% |
| 1yy3A02 | 2.40.10.240 | Mainly Beta › Beta Barrel › Thrombin, subunit H › QueA-like | 0.57 | 48.0 | 4.42e-01 | 100.0% | 71.7% |
| 4tvcA01 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.56 | 42.0 | 3.23e-01 | 83.8% | 47.3% |
| 3ni2A01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.53 | 41.0 | 2.66e-01 | 89.2% | 99.5% |
| 4bt2A01 | 3.30.1330.80 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 | 0.51 | 34.0 | 3.02e-01 | 94.6% | 44.7% |
| 6lciA01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.51 | 42.0 | 3.42e-01 | 93.2% | 97.9% |
| 7k9cA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 33.0 | 3.18e-01 | 77.0% | 57.0% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3935130 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 33.0 | 3.63e-01 | 82.4% | 81.8% |
| 3929073 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 45.0 | 3.90e-01 | 97.3% | 89.6% |
| 3470360 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.50 | 45.0 | 3.71e-01 | 100.0% | 75.6% |
| 4030499 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.50 | 44.0 | 3.60e-01 | 100.0% | 53.0% |