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BML_08182015_1_5m_scaffold_5_prodigal-single.1__X__X__00105
Bact-VirBML_08182015_1_5m_scaffold_5_prodigal-single.1__X__X__00105
Identity
- Kingdom:
- phage
Quality
88.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 25-124
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vb6A01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.75 | 38.0 | 5.00e-01 | 92.0% | 90.7% |
| 3kxtA00 | 2.30.30.610 | Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 | 0.63 | 34.0 | 4.43e-01 | 71.0% | 96.4% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 36.0 | 4.22e-01 | 95.0% | 83.3% |
| 4lqzA00 | 2.40.128.570 | Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4909 | 0.59 | 32.0 | 2.97e-01 | 87.0% | 40.5% |
| 2kymA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 43.0 | 4.44e-01 | 86.0% | 90.3% |
| 3ntkB01 | 2.40.50.790 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 39.0 | 4.17e-01 | 75.0% | 98.8% |
| 2k5hA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 35.0 | 4.00e-01 | 94.0% | 90.4% |
| 7k9cA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 39.0 | 4.22e-01 | 94.0% | 91.9% |
| 4an6B00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.51 | 45.0 | 3.82e-01 | 100.0% | 74.3% |
| 1wbaA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.50 | 45.0 | 3.78e-01 | 100.0% | 76.0% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3304627 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.78 | 38.0 | 5.07e-01 | 95.0% | 87.3% |
| 3577505 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 36.0 | 3.85e-01 | 93.0% | 60.0% |
| 3561707 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.65 | 37.0 | 3.77e-01 | 94.0% | 55.0% |
| 3340900 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 37.0 | 4.45e-01 | 95.0% | 84.6% |
| 3596659 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.65 | 48.0 | 4.03e-01 | 77.0% | 80.6% |
| 4878827 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.63 | 37.0 | 4.56e-01 | 96.0% | 95.2% |
| 3547082 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.63 | 47.0 | 4.56e-01 | 78.0% | 90.9% |
| 3609624 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.63 | 46.0 | 4.09e-01 | 78.0% | 88.3% |
| 3713167 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.61 | 45.0 | 3.99e-01 | 78.0% | 86.2% |
| 3253768 | 4.1.1.308 ↗ | beta barrels › SH3 › SH3 › SH3 › PF31073 | 0.61 | 37.0 | 4.39e-01 | 93.0% | 88.6% |
| 3634014 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.60 | 45.0 | 3.98e-01 | 78.0% | 93.6% |
| 3504269 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.60 | 44.0 | 4.33e-01 | 78.0% | 92.7% |
| 4204482 | 223.1.1.153 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PF27485 | 0.51 | 33.0 | 2.47e-01 | 100.0% | 24.9% |