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BML_08182015_6_5m_scaffold_1_prodigal-single.1__X__X__00023
Bact-VirBML_08182015_6_5m_scaffold_1_prodigal-single.1__X__X__00023
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-144_222-239
Domain cluster:
representative
CATH (64)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2yk4A01 | 3.30.370.20 | Alpha Beta › 2-Layer Sandwich › Barnase; Chain D › | 0.78 | 36.0 | 5.04e-01 | 93.2% | 87.8% |
| 2vchA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.68 | 55.0 | 4.68e-01 | 85.8% | 99.6% |
| 1ll0B00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.66 | 61.0 | 5.09e-01 | 98.1% | 90.6% |
| 4cvhA01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.65 | 60.0 | 5.30e-01 | 98.8% | 96.6% |
| 4kt7A00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.65 | 61.0 | 5.36e-01 | 98.8% | 97.8% |
| 2czqA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.65 | 45.0 | 4.19e-01 | 71.0% | 98.0% |
| 4pscA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.64 | 44.0 | 4.01e-01 | 70.4% | 78.2% |
| 1s4nB00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.64 | 58.0 | 4.54e-01 | 98.8% | 82.4% |
| 3cgxA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.63 | 57.0 | 5.05e-01 | 96.9% | 87.8% |
| 3gffA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.63 | 45.0 | 3.61e-01 | 73.5% | 82.6% |
| 1omzB00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.62 | 56.0 | 4.70e-01 | 94.4% | 83.9% |
| 5tz8A01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.61 | 54.0 | 4.80e-01 | 96.3% | 85.0% |
| 1fcdA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.61 | 41.0 | 4.40e-01 | 93.2% | 79.9% |
| 4jz8B00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.60 | 51.0 | 4.11e-01 | 90.1% | 97.7% |
| 3cnhA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.60 | 46.0 | 4.97e-01 | 84.0% | 97.0% |
| 2l5oA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.58 | 42.0 | 4.34e-01 | 86.4% | 79.3% |
| 3bm3A00 | 3.40.91.80 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.58 | 40.0 | 3.38e-01 | 70.4% | 43.6% |
| 3gl3D00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.58 | 40.0 | 4.33e-01 | 84.0% | 83.2% |
| 3d40A00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.57 | 48.0 | 4.21e-01 | 91.4% | 94.8% |
| 1pg2A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.57 | 51.0 | 3.98e-01 | 96.3% | 88.7% |
| 1lu4A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.57 | 39.0 | 4.23e-01 | 83.3% | 82.8% |
| 5djsA02 | 3.40.50.11380 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 47.0 | 4.49e-01 | 88.3% | 93.1% |
| 3smvA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.56 | 45.0 | 4.65e-01 | 98.1% | 88.5% |
| 1ffyA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.56 | 50.0 | 3.74e-01 | 98.1% | 91.3% |
| 4eekA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.55 | 45.0 | 4.49e-01 | 85.2% | 96.9% |
| 3cb2B01 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.55 | 49.0 | 4.18e-01 | 97.5% | 100.0% |
| 2pr7A00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.55 | 44.0 | 4.75e-01 | 90.1% | 100.0% |
| 1v8bA01 | 3.40.50.1480 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Adenosylhomocysteinase-like | 0.55 | 47.0 | 3.74e-01 | 91.4% | 75.2% |
| 1rqgA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.55 | 48.0 | 4.64e-01 | 94.4% | 100.0% |
| 3c8zA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.55 | 50.0 | 3.95e-01 | 97.5% | 88.6% |
| 2e18A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.55 | 49.0 | 4.22e-01 | 98.1% | 74.6% |
| 7zs9401 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.54 | 49.0 | 4.38e-01 | 96.3% | 99.6% |
| 2f9sB00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.54 | 37.0 | 4.03e-01 | 85.2% | 83.8% |
| 2csxA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.54 | 49.0 | 4.37e-01 | 98.1% | 97.3% |
| 4cooB01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 42.0 | 3.87e-01 | 92.6% | 64.4% |
| 2ielA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.54 | 42.0 | 4.62e-01 | 91.4% | 100.0% |
| 2bd0A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 47.0 | 4.12e-01 | 93.8% | 99.6% |
| 3e9qA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 47.0 | 4.06e-01 | 96.3% | 95.3% |
| 3me8B00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 41.0 | 4.19e-01 | 85.8% | 82.7% |
| 2c83A02 | 3.40.50.11110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Sialyltransferase, C-terminal GT-B Rossman nucleotide-binding domain | 0.53 | 45.0 | 4.37e-01 | 97.5% | 81.8% |
| 4o1eB00 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.53 | 43.0 | 3.67e-01 | 86.4% | 92.9% |
| 3e8mA00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.53 | 45.0 | 4.56e-01 | 98.1% | 89.0% |
| 1bdbA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 45.0 | 3.82e-01 | 91.4% | 90.6% |
| 5kbpA01 | 3.20.110.10 | Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain | 0.53 | 43.0 | 3.60e-01 | 86.4% | 87.1% |
| 1gu7A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 43.0 | 4.18e-01 | 98.1% | 77.9% |
| 3sp1A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.53 | 48.0 | 4.08e-01 | 99.4% | 92.1% |
| 2gs3A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 42.0 | 4.16e-01 | 84.0% | 80.1% |
| 2gm3A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.53 | 46.0 | 4.75e-01 | 95.1% | 99.3% |
| 2a67B00 | 3.40.50.850 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like | 0.52 | 47.0 | 4.74e-01 | 98.8% | 98.2% |
| 1iq0A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.52 | 47.0 | 3.60e-01 | 98.1% | 93.8% |
| 3vmmA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 41.0 | 4.50e-01 | 93.8% | 99.3% |
| 3gemD00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 45.0 | 4.19e-01 | 96.9% | 98.1% |
| 5vlcA01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.52 | 42.0 | 4.34e-01 | 85.8% | 88.0% |
| 2cunA01 | 3.40.50.1260 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate kinase, N-terminal domain | 0.52 | 46.0 | 4.31e-01 | 96.9% | 85.8% |
| 2b34A00 | 3.40.50.850 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like | 0.52 | 46.0 | 4.39e-01 | 96.9% | 95.3% |
| 1j2rA00 | 3.40.50.850 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like | 0.51 | 46.0 | 4.45e-01 | 98.8% | 92.6% |
| 3bf0C03 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.51 | 44.0 | 4.36e-01 | 90.7% | 97.0% |
| 5bt9D00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 45.0 | 3.94e-01 | 96.3% | 95.1% |
| 1x9gA00 | 3.40.50.850 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like | 0.51 | 46.0 | 4.36e-01 | 98.1% | 96.9% |
| 5xtfA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 45.0 | 4.04e-01 | 97.5% | 98.7% |
| 1atzB00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.51 | 46.0 | 4.43e-01 | 98.8% | 96.3% |
| 3fnrA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.51 | 45.0 | 3.70e-01 | 97.5% | 95.1% |
| 3mtqB00 | 3.40.50.510 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component | 0.51 | 38.0 | 4.12e-01 | 98.1% | 93.4% |
| 1u7zC00 | 3.40.50.10300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like | 0.51 | 41.0 | 3.75e-01 | 87.0% | 98.2% |
ECOD (81)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4237788 | 2007.1.3.46 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › PF29871 | 0.76 | 40.0 | 4.30e-01 | 70.4% | 58.6% |
| 3867818 | 7516.1.1.130 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › PF30737 | 0.73 | 66.0 | 4.88e-01 | 95.7% | 78.4% |
| 3697120 | 7516.1.1.79 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_trans_2_3 | 0.72 | 66.0 | 4.81e-01 | 96.9% | 74.6% |
| 3501020 | 7516.1.1.16 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_43 | 0.71 | 65.0 | 5.24e-01 | 96.9% | 81.4% |
| 3968368 | 2007.1.3.11 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › VpsR | 0.70 | 36.0 | 4.10e-01 | 71.0% | 65.0% |
| 4102484 | 7516.1.1.5 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › IspD | 0.67 | 62.0 | 5.61e-01 | 96.9% | 95.7% |
| 3678527 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.67 | 56.0 | 4.64e-01 | 87.0% | 99.3% |
| None | — | 0.66 | 60.0 | 5.36e-01 | 96.9% | 99.5% | |
| 4075399 | 7512.1.1.31 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_4_4 | 0.63 | 53.0 | 4.69e-01 | 88.9% | 96.6% |
| 5083625 | 7575.1.1.1 ↗ | a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › Peptidase_C14 | 0.62 | 43.0 | 3.60e-01 | 70.4% | 99.6% |
| 3165247 | 7531.1.1.1 ↗ | a/b three-layered sandwiches › Carbamate kinase-like › Carbamate kinase-like › Carbamate kinase-like › AA_kinase | 0.61 | 50.0 | 4.09e-01 | 87.7% | 100.0% |
| 4049486 | 2005.1.1.29 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g | 0.60 | 53.0 | 4.26e-01 | 95.7% | 95.9% |
| None | — | 0.59 | 53.0 | 4.27e-01 | 95.7% | 99.3% | |
| 3335119 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.59 | 54.0 | 4.59e-01 | 98.8% | 92.7% |
| 3172677 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.59 | 54.0 | 3.69e-01 | 100.0% | 79.0% |
| 5046802 | 2485.1.1.4 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › AhpC-TSA | 0.59 | 40.0 | 4.23e-01 | 84.6% | 76.4% |
| 5060190 | 2485.1.1.4 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › AhpC-TSA | 0.58 | 42.0 | 4.33e-01 | 88.3% | 78.7% |
| 3665075 | 7514.1.1.1 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 | 0.58 | 40.0 | 4.27e-01 | 75.3% | 78.6% |
| 4160313 | 7531.1.1.1 ↗ | a/b three-layered sandwiches › Carbamate kinase-like › Carbamate kinase-like › Carbamate kinase-like › AA_kinase | 0.58 | 49.0 | 4.17e-01 | 90.7% | 94.8% |
| 3604946 | 2005.1.1.29 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g | 0.58 | 51.0 | 4.07e-01 | 93.2% | 100.0% |
| 5068949 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.58 | 52.0 | 4.58e-01 | 96.9% | 86.8% |
| 4939229 | 2006.1.6.45 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › PF30231 | 0.58 | 48.0 | 4.45e-01 | 87.0% | 94.0% |
| 4304220 | 7512.1.1.53 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › ALG11_N | 0.58 | 53.0 | 4.24e-01 | 98.8% | 66.6% |
| 4399974 | 375.1.1.46 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1g | 0.58 | 51.0 | 4.09e-01 | 95.7% | 96.8% |
| None | — | 0.57 | 51.0 | 3.43e-01 | 95.7% | 50.4% | |
| 5063725 | 2485.1.1.4 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › AhpC-TSA | 0.57 | 39.0 | 4.29e-01 | 84.0% | 85.4% |
| 4192589 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.57 | 51.0 | 3.41e-01 | 95.7% | 59.9% |
| None | — | 0.57 | 50.0 | 4.06e-01 | 95.7% | 93.2% | |
| 4025154 | 2005.1.1.29 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g | 0.57 | 51.0 | 4.15e-01 | 96.9% | 98.0% |
| 3967054 | 7512.1.1.31 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_4_4 | 0.57 | 51.0 | 4.72e-01 | 96.3% | 98.0% |
| 3966537 | 140.1.1.8 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1g,Anticodon_3 | 0.57 | 51.0 | 3.57e-01 | 95.7% | 74.3% |
| None | — | 0.57 | 50.0 | 3.39e-01 | 95.7% | 59.9% | |
| 4020660 | 2005.1.1.29 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g | 0.57 | 50.0 | 4.02e-01 | 95.7% | 85.0% |
| 3496323 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.57 | 48.0 | 4.82e-01 | 96.9% | 89.1% |
| 3496394 | 7512.1.1.37 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › FUT8_N_cat | 0.57 | 48.0 | 4.70e-01 | 96.9% | 84.0% |
| 4499558 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.57 | 51.0 | 4.85e-01 | 96.9% | 99.5% |
| 3414530 | 2005.1.1.29 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g | 0.57 | 51.0 | 4.29e-01 | 96.9% | 96.2% |
| 5082618 | 2485.1.1.31 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Redoxin | 0.57 | 43.0 | 4.22e-01 | 86.4% | 72.2% |
| 4221945 | 375.1.1.203 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1, tRNA-synt_1g | 0.56 | 50.0 | 3.91e-01 | 95.7% | 91.8% |
| 3834488 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.56 | 51.0 | 3.35e-01 | 98.1% | 55.5% |
| 5004224 | 2005.1.1.29 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g | 0.56 | 51.0 | 3.61e-01 | 98.8% | 73.3% |
| 5050831 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.56 | 40.0 | 4.18e-01 | 93.2% | 79.3% |
| 4317001 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.56 | 49.0 | 3.92e-01 | 96.9% | 91.2% |
| 4062736 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.56 | 51.0 | 3.51e-01 | 99.4% | 75.1% |
| 4945858 | 7531.1.1.1 ↗ | a/b three-layered sandwiches › Carbamate kinase-like › Carbamate kinase-like › Carbamate kinase-like › AA_kinase | 0.55 | 46.0 | 4.11e-01 | 88.9% | 99.1% |
| 4349168 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.55 | 49.0 | 3.49e-01 | 98.1% | 83.8% |
| 3516224 | 7512.1.1.53 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › ALG11_N | 0.55 | 50.0 | 4.19e-01 | 98.8% | 88.7% |
| None | — | 0.55 | 38.0 | 3.91e-01 | 84.6% | 71.9% | |
| 4977029 | 2485.1.1.4 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › AhpC-TSA | 0.55 | 39.0 | 4.09e-01 | 80.9% | 81.2% |
| 5077882 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.55 | 48.0 | 4.33e-01 | 95.7% | 90.7% |
| None | — | 0.55 | 49.0 | 3.28e-01 | 98.1% | 55.5% | |
| 3811360 | 2006.1.4.3 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN | 0.55 | 50.0 | 4.86e-01 | 98.8% | 98.9% |
| 4885816 | 375.1.1.10 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1e | 0.55 | 47.0 | 4.02e-01 | 92.0% | 93.3% |
| 5043851 | 7512.1.1.107 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › DUF354 | 0.54 | 45.0 | 4.28e-01 | 86.4% | 78.4% |
| 3833778 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.54 | 49.0 | 4.24e-01 | 98.1% | 91.6% |
| 5029021 | 7512.1.1.15 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyphos_transf | 0.54 | 45.0 | 4.23e-01 | 88.3% | 76.0% |
| 4501018 | 2005.1.1.12 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1e | 0.54 | 48.0 | 3.94e-01 | 95.7% | 91.9% |
| 3309375 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.54 | 48.0 | 4.04e-01 | 97.5% | 95.7% |
| 1698350 | 7512.1.1.33 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_41 | 0.54 | 46.0 | 4.36e-01 | 99.4% | 78.0% |
| 5068202 | 2003.1.3.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Pyr_redox_2 | 0.53 | 43.0 | 3.46e-01 | 95.1% | 44.8% |
| 3205073 | 2005.1.1.29 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g | 0.53 | 47.0 | 4.08e-01 | 97.5% | 99.6% |
| None | — | 0.52 | 48.0 | 3.70e-01 | 98.8% | 86.5% | |
| 4970856 | 7512.1.1.107 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › DUF354 | 0.52 | 43.0 | 4.11e-01 | 86.4% | 80.5% |
| 3823870 | 2006.1.4.3 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN | 0.52 | 45.0 | 4.67e-01 | 96.9% | 98.7% |
| 149318 | 2003.1.10.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain | 0.52 | 41.0 | 4.50e-01 | 93.8% | 99.3% |
| 3733640 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.52 | 48.0 | 4.63e-01 | 98.8% | 96.1% |
| 4020247 | 2485.1.1.4 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › AhpC-TSA | 0.52 | 45.0 | 4.40e-01 | 95.7% | 88.3% |
| 4946536 | 2002.3.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Glyco_hydro_38N | 0.51 | 41.0 | 3.47e-01 | 85.8% | 83.5% |
| 4983048 | 7512.1.1.107 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › DUF354 | 0.51 | 42.0 | 4.03e-01 | 86.4% | 78.4% |
| 3197713 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.51 | 46.0 | 3.55e-01 | 96.3% | 88.9% |
| 4981906 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.51 | 44.0 | 4.50e-01 | 96.3% | 93.8% |
| 3993777 | 2488.1.1.19 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › PF27710 | 0.51 | 46.0 | 4.15e-01 | 98.1% | 87.7% |
| 4996439 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.51 | 42.0 | 3.69e-01 | 87.7% | 69.8% |
| 3817903 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.50 | 46.0 | 4.00e-01 | 99.4% | 98.0% |
| 4955741 | 2003.1.6.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin | 0.50 | 45.0 | 4.23e-01 | 98.1% | 80.0% |
| 4680227 | 7548.1.1.1 ↗ | a/b three-layered sandwiches › Methylesterase CheB, C-terminal domain › Methylesterase CheB, C-terminal domain › Methylesterase CheB, C-terminal domain › CheB_methylest | 0.50 | 45.0 | 4.22e-01 | 97.5% | 88.5% |
| 3634181 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.50 | 45.0 | 3.33e-01 | 98.8% | 97.9% |
| 4974558 | 7512.1.1.32 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_1_4 | 0.50 | 41.0 | 3.93e-01 | 87.0% | 74.2% |
| 4305337 | 7512.1.1.117 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_28, Glyco_tran_28_C | 0.50 | 45.0 | 3.43e-01 | 97.5% | 98.1% |
| 3163893 | 7512.1.1.23 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_52 | 0.50 | 45.0 | 4.40e-01 | 95.7% | 97.1% |
| 5039591 | 7512.1.1.13 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › PS_pyruv_trans | 0.50 | 41.0 | 3.73e-01 | 87.0% | 77.2% |
D2
medium
residues 145-221
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xw8A00 | 3.20.20.370 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase | 0.58 | 48.0 | 3.42e-01 | 90.9% | 59.4% |
| 4zi3D00 | 1.20.1520.10 | Mainly Alpha › Up-down Bundle › Adp-ribosylation factor-like protein 2-binding protein fold › ADP-ribosylation factor-like 2-binding protein, domain | 0.55 | 42.0 | 3.54e-01 | 81.8% | 80.5% |
| 2fh5A01 | 3.30.450.60 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.54 | 46.0 | 3.97e-01 | 93.5% | 96.7% |
| 4ecmA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.51 | 45.0 | 3.18e-01 | 100.0% | 34.3% |
| 6iymA02 | 3.90.850.10 | Alpha Beta › Alpha-Beta Complex › Fumarylacetoacetate hydrolase; domain 2 › Fumarylacetoacetase-like, C-terminal domain | 0.50 | 39.0 | 2.97e-01 | 89.6% | 96.7% |