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BML_08182015_6_5m_scaffold_1_prodigal-single.1__X__X__00134
Bact-VirBML_08182015_6_5m_scaffold_1_prodigal-single.1__X__X__00134
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-79
Domain cluster:
rep: BML_08182015_1_5m_scaffold_19_prodigal-single.1__X__X__00162__D21-83
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bz6A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 34.0 | 3.39e-01 | 76.6% | 59.0% |
| 2obpA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 38.0 | 3.77e-01 | 98.7% | 74.1% |
| 2dgrA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.52 | 36.0 | 3.85e-01 | 100.0% | 85.1% |
| 1gxrA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 42.0 | 2.77e-01 | 90.9% | 89.3% |
| 3lmmA03 | 3.30.565.60 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › | 0.51 | 34.0 | 2.73e-01 | 70.1% | 46.2% |
| 8agaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 37.0 | 3.23e-01 | 100.0% | 49.2% |
| 2j8aA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.50 | 38.0 | 3.68e-01 | 97.4% | 73.6% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3370400 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 32.0 | 3.38e-01 | 75.3% | 58.6% |
| 3185408 | 101.1.2.615 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFA2_Winged_2, TFA2_E-tether | 0.57 | 32.0 | 3.05e-01 | 87.0% | 44.2% |
| 3728313 | 101.1.2.164 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFA2_Winged_2 | 0.56 | 32.0 | 3.49e-01 | 87.0% | 66.2% |
| 3636652 | 101.1.2.122 ↗ | alpha arrays › HTH › HTH › winged helix domain › CSN8_PSD8_EIF3K | 0.56 | 37.0 | 3.89e-01 | 97.4% | 75.7% |
| 4023344 | 101.1.2.164 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFA2_Winged_2 | 0.56 | 32.0 | 2.99e-01 | 87.0% | 43.0% |
| 4456203 | 101.1.2.19 ↗ | alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac | 0.52 | 47.0 | 3.37e-01 | 100.0% | 80.5% |
| 3810002 | 101.1.2.111 ↗ | alpha arrays › HTH › HTH › winged helix domain › RQC | 0.52 | 40.0 | 3.56e-01 | 83.1% | 86.4% |
| 4177964 | 304.7.1.2 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Inhibitor_I9 | 0.51 | 39.0 | 3.78e-01 | 100.0% | 74.1% |