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BML_08182015_6_5m_scaffold_1_prodigal-single.1__X__X__00154

Bact-Vir

BML_08182015_6_5m_scaffold_1_prodigal-single.1__X__X__00154

Identity

Kingdom:
phage

Quality

75.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 26-92
PDB
CATH (77)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1v2bB00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.71 52.0 3.95e-01 92.5% 34.4%
1tzzB01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.70 61.0 5.11e-01 100.0% 99.2%
1nrfA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.70 58.0 3.96e-01 95.5% 25.2%
2wuqB00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.69 60.0 3.98e-01 100.0% 24.4%
3ecrB03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.69 57.0 5.00e-01 91.0% 75.5%
2rs7A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.69 59.0 5.74e-01 95.5% 91.9%
2mc8A00 3.10.450.590 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.69 49.0 4.12e-01 92.5% 43.9%
4bs9A05 3.30.160.660 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.69 59.0 5.01e-01 98.5% 57.0%
1m6kA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.69 59.0 4.08e-01 100.0% 28.4%
5nj5A01 3.30.2290.10 Alpha Beta › 2-Layer Sandwich › PmbA/TldD fold › PmbA/TldD superfamily 0.69 59.0 4.09e-01 98.5% 37.7%
2g16B00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.68 49.0 3.67e-01 76.1% 37.4%
3qtdA01 3.30.2290.10 Alpha Beta › 2-Layer Sandwich › PmbA/TldD fold › PmbA/TldD superfamily 0.67 59.0 4.12e-01 100.0% 37.3%
1tu1A00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.67 49.0 3.83e-01 92.5% 36.1%
2cm4A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.67 47.0 3.69e-01 91.0% 34.5%
7pkwA01 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 50.0 4.31e-01 80.6% 51.5%
2lyxA00 3.10.450.390 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Protein of unknown function DUF3889 0.67 54.0 5.00e-01 97.0% 69.0%
3ub1D02 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 50.0 4.24e-01 86.6% 49.1%
1vqqA01 3.10.450.100 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › NTF2-like; domain 1 0.65 52.0 4.53e-01 92.5% 56.0%
3k0zA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 57.0 4.42e-01 100.0% 45.6%
4ec6A00 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 51.0 4.42e-01 92.5% 54.1%
4n6tA00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 49.0 4.71e-01 97.0% 70.9%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 43.0 4.26e-01 88.1% 66.7%
2bbhA01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.64 43.0 3.37e-01 83.6% 31.1%
6a2bA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 51.0 4.63e-01 86.6% 91.0%
1s5aB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 55.0 4.37e-01 100.0% 49.7%
2i9wA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 49.0 3.65e-01 85.1% 35.2%
3bb9B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 51.0 4.23e-01 91.0% 51.2%
1bp1A01 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.63 55.0 4.06e-01 98.5% 63.3%
3bcyA00 3.40.1000.40 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Respiratory growth induced protein 1 0.63 49.0 3.88e-01 98.5% 39.7%
3hn3A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 53.0 4.58e-01 94.0% 81.7%
3ua3A03 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.62 52.0 3.70e-01 94.0% 52.2%
4ffeX00 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.62 45.0 3.45e-01 77.6% 69.3%
4ydzA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 45.0 3.61e-01 79.1% 63.7%
3b7cA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 47.0 3.96e-01 92.5% 48.3%
4jhcB00 3.90.950.10 Alpha Beta › Alpha-Beta Complex › Maf protein › 0.60 52.0 3.90e-01 100.0% 95.6%
2r55A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 51.0 3.64e-01 95.5% 49.5%
1lf6A01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.60 49.0 3.31e-01 92.5% 36.6%
5ig0A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 52.0 4.18e-01 97.0% 51.1%
3ec9A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 51.0 4.23e-01 100.0% 52.7%
1f49A05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.60 52.0 3.48e-01 100.0% 69.0%
3wasA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.60 48.0 3.02e-01 91.0% 15.9%
3abiA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.60 42.0 3.12e-01 74.6% 95.5%
2k54A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 45.0 3.84e-01 89.6% 47.2%
1tuhA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 49.0 4.10e-01 100.0% 52.7%
3ke7B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 47.0 3.87e-01 97.0% 46.6%
5b4wA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 47.0 2.88e-01 89.6% 29.0%
4jgwA01 1.20.870.10 Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 0.58 43.0 3.38e-01 82.1% 41.7%
5bw0F00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.58 43.0 4.00e-01 92.5% 61.5%
1t17A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 48.0 3.83e-01 98.5% 60.1%
2b1xB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 48.0 3.73e-01 100.0% 44.9%
1buqA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 48.0 3.98e-01 98.5% 52.0%
3e99A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 47.0 3.73e-01 95.5% 47.3%
2rgqB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 48.0 3.96e-01 100.0% 51.1%
4u13A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 40.0 3.54e-01 86.6% 47.7%
6gp1A00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.57 38.0 3.91e-01 83.6% 72.3%
1c7hA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 47.0 3.93e-01 97.0% 52.0%
2rfrA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 47.0 3.69e-01 97.0% 45.5%
1t3yA00 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.56 45.0 3.71e-01 91.0% 84.0%
6m9yA00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.56 37.0 3.87e-01 83.6% 77.2%
4j8tA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 46.0 3.88e-01 98.5% 54.7%
2hqlA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 45.0 4.14e-01 91.0% 70.3%
4xmeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 45.0 3.39e-01 97.0% 34.2%
5kkuD00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.55 44.0 2.97e-01 89.6% 37.3%
2gr7A00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.55 43.0 3.86e-01 100.0% 60.4%
3g8zA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 46.0 3.87e-01 100.0% 53.1%
2vsmA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.55 44.0 2.78e-01 92.5% 15.5%
1luiA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.55 41.0 3.61e-01 85.1% 70.4%
1lhpA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.54 47.0 3.05e-01 97.0% 23.9%
3dmcA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 43.0 3.53e-01 97.0% 45.5%
4l8hB00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.54 48.0 3.94e-01 100.0% 88.6%
3kspA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 42.0 3.49e-01 92.5% 46.5%
2gaiA03 2.70.20.10 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 0.53 44.0 3.78e-01 100.0% 63.4%
1viuC00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.53 45.0 3.29e-01 92.5% 67.8%
2bngC00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 43.0 3.50e-01 98.5% 45.7%
2ql8A00 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.51 38.0 3.10e-01 83.6% 50.7%
4rt0A00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.51 44.0 3.81e-01 100.0% 84.4%
4cgyA03 2.70.20.10 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 0.50 42.0 3.55e-01 100.0% 57.8%
ECOD (92)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4117325 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.86 70.0 5.49e-01 100.0% 44.6%
4240105 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.85 69.0 5.65e-01 100.0% 50.4%
4124320 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.83 74.0 5.79e-01 100.0% 49.2%
4609098 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.82 73.0 5.65e-01 100.0% 47.4%
3816855 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.82 72.0 5.78e-01 95.5% 57.6%
4119536 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.82 66.0 5.23e-01 100.0% 44.6%
4169235 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.82 68.0 5.47e-01 94.0% 48.8%
3965319 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.81 70.0 5.76e-01 98.5% 53.9%
4245955 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.81 65.0 5.16e-01 100.0% 44.6%
4304505 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.80 70.0 5.55e-01 100.0% 49.2%
3685150 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.80 73.0 5.35e-01 100.0% 41.2%
5036880 330.1.1.35 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › LeuA_dimer 0.80 69.0 6.83e-01 94.0% 94.3%
4640527 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.79 70.0 5.65e-01 100.0% 52.0%
3672943 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.79 70.0 7.09e-01 97.0% 100.0%
3951937 330.8.1.1 a+b two layers › dsRBD-like › Rv2632c-like › Rv2632c-like › Rv2632c-like 0.78 66.0 6.02e-01 98.5% 70.8%
4026006 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.77 66.0 6.24e-01 95.5% 78.8%
3960733 330.8.1.1 a+b two layers › dsRBD-like › Rv2632c-like › Rv2632c-like › Rv2632c-like 0.77 68.0 6.28e-01 97.0% 81.2%
4556738 7503.1.1.1 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › CsgG 0.74 64.0 4.42e-01 100.0% 85.2%
4944562 512.1.1.5 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_3rd 0.74 60.0 5.05e-01 88.1% 70.9%
3928293 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.73 65.0 5.43e-01 100.0% 74.8%
4978074 512.1.1.0 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) 0.72 60.0 5.44e-01 95.5% 67.8%
4937350 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.71 50.0 5.11e-01 77.6% 75.4%
3931594 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.71 63.0 5.72e-01 100.0% 76.7%
2617498 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.70 54.0 4.56e-01 91.0% 50.5%
5032125 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.70 46.0 3.06e-01 70.1% 17.3%
3933857 9.1.1.48 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_10 0.70 55.0 3.87e-01 95.5% 27.6%
3484671 3433.1.1.0 a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Plasmid-encoded ParB dimerization domain 0.69 49.0 5.44e-01 86.6% 100.0%
5079219 512.1.1.1 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.69 60.0 4.21e-01 98.5% 36.7%
5000965 512.1.1.0 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) 0.69 59.0 5.39e-01 98.5% 72.2%
3499841 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.69 62.0 5.61e-01 100.0% 77.8%
5076771 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.69 59.0 5.07e-01 98.5% 75.5%
4977218 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.69 55.0 3.45e-01 86.6% 27.5%
3608102 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.69 55.0 5.46e-01 94.0% 84.3%
4956104 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.69 57.0 4.90e-01 94.0% 72.7%
3978389 512.1.1.0 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) 0.68 58.0 4.87e-01 95.5% 72.2%
3819309 330.1.1.5 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DND1_DSRM 0.68 61.0 5.67e-01 100.0% 88.2%
4056691 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.68 46.0 3.78e-01 70.1% 49.2%
3618840 9.1.1.48 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_10 0.67 52.0 3.73e-01 91.0% 27.6%
5078927 512.1.1.1 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.67 58.0 4.22e-01 100.0% 42.1%
5046475 2.2.1.0 beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins 0.67 58.0 4.80e-01 97.0% 69.2%
4409103 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.67 58.0 4.76e-01 98.5% 65.6%
3966796 512.1.1.3 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st, PmbA_TldD_2nd 0.67 58.0 4.06e-01 100.0% 37.8%
5042975 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.66 47.0 3.39e-01 88.1% 25.6%
4989302 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.66 57.0 4.12e-01 100.0% 39.0%
3820010 881.1.1.1 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.66 51.0 3.86e-01 98.5% 35.0%
3605420 2484.1.1.26 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi 0.66 56.0 3.83e-01 95.5% 94.0%
5014277 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.66 45.0 4.12e-01 94.0% 55.3%
4967926 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.66 57.0 4.74e-01 100.0% 68.0%
3601539 2484.1.1.26 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi 0.66 56.0 3.91e-01 95.5% 93.5%
3421524 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.65 57.0 3.50e-01 97.0% 17.5%
4016644 11.8.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like 0.64 50.0 3.93e-01 86.6% 43.6%
3675483 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.64 49.0 3.01e-01 82.1% 16.0%
4975538 512.1.1.1 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.64 56.0 3.96e-01 100.0% 37.7%
3243813 11.10.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.64 54.0 4.38e-01 91.0% 65.0%
4965879 881.1.1.44 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF6517 0.63 55.0 3.99e-01 97.0% 35.7%
3253090 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.63 48.0 4.09e-01 86.6% 50.0%
3920557 4210.1.1.3 a+b two layers › WGR domain › WGR domain › WGR domain › PF26166 0.63 51.0 4.56e-01 98.5% 62.1%
4949089 3053.1.1.1 beta barrels › barrel domain in putative modulator of DNA gyrase, PmbA/TldD › barrel domain in putative modulator of DNA gyrase, PmbA/TldD › barrel domain in putative modulator of DNA gyrase, PmbA/TldD › PmbA_TldD_3rd 0.63 54.0 3.63e-01 100.0% 69.9%
3603689 512.1.1.3 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st, PmbA_TldD_2nd 0.63 54.0 3.84e-01 98.5% 38.1%
3220419 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.63 42.0 3.64e-01 70.1% 44.5%
3717566 5.1.3.28 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 0.62 53.0 3.61e-01 98.5% 29.3%
4979861 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.62 53.0 4.51e-01 98.5% 73.0%
3228525 241.15.1.0 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.62 54.0 4.59e-01 98.5% 84.5%
5023510 2484.1.1.59 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.62 52.0 3.38e-01 98.5% 20.0%
4927081 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.61 53.0 4.20e-01 100.0% 74.5%
3668642 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.61 51.0 4.39e-01 97.0% 69.6%
3711119 331.9.1.0 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.61 51.0 4.29e-01 92.5% 87.8%
3260438 5.1.2.7 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_130 0.61 52.0 3.25e-01 98.5% 16.8%
3243080 243.5.1.0 a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region 0.61 52.0 4.64e-01 100.0% 77.0%
3251351 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.60 49.0 4.14e-01 98.5% 51.7%
3391461 3308.2.1.1 beta duplicates or obligate multimers › periplasmic lysozyme inhibitor of I-type lysozyme-like › XAC2610 protein › XAC2610 protein › 4_1_CTD 0.60 49.0 4.70e-01 86.6% 88.0%
3808123 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.60 50.0 4.00e-01 98.5% 43.8%
3967620 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.60 48.0 3.91e-01 91.0% 48.1%
3309307 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.60 53.0 3.06e-01 98.5% 12.8%
3316054 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 51.0 3.10e-01 94.0% 15.5%
3365246 331.3.1.5 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc 0.59 49.0 3.74e-01 95.5% 55.3%
5049570 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.58 43.0 3.08e-01 94.0% 23.9%
376518 243.1.1.25 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 0.58 47.0 3.87e-01 97.0% 46.6%
3466796 331.3.1.5 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc 0.58 49.0 3.68e-01 95.5% 53.7%
5047469 331.10.2.0 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.57 51.0 4.13e-01 100.0% 52.3%
3966884 243.1.1.28 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.57 47.0 3.92e-01 97.0% 51.5%
3273514 243.1.1.36 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_5 0.57 43.0 3.54e-01 91.0% 43.1%
4990857 2484.1.1.59 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.57 50.0 3.33e-01 100.0% 25.1%
3490957 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.57 43.0 4.23e-01 83.6% 81.3%
3271321 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.56 42.0 3.48e-01 91.0% 41.5%
4976136 331.10.2.0 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.56 41.0 3.76e-01 89.6% 57.9%
None 0.56 47.0 3.92e-01 98.5% 52.8%
3409717 633.33.1.1 alpha bundles › Bromodomain-like › Rogdi › Rogdi › Rogdi_lz 0.55 47.0 3.25e-01 98.5% 56.4%
4950139 243.1.1.25 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 0.55 45.0 3.78e-01 95.5% 52.8%
2724186 243.1.1.67 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Cds6_C 0.53 41.0 3.58e-01 92.5% 52.5%
3212526 708.1.1.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.52 45.0 3.77e-01 97.0% 54.2%
3265334 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.52 42.0 3.52e-01 86.6% 58.2%
D2 high residues 120-177
PDB
CATH (67)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ec6A00 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.70 59.0 4.84e-01 94.8% 89.9%
1uypA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.69 58.0 3.73e-01 94.8% 21.9%
2rsxA00 3.10.450.420 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 57.0 4.18e-01 94.8% 94.3%
3d9rB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 57.0 4.38e-01 94.8% 88.0%
5cxoB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 54.0 4.27e-01 94.8% 80.6%
1of5A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 56.0 4.22e-01 98.3% 83.1%
3b7cA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 56.0 4.44e-01 94.8% 94.2%
4bwpB01 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.66 56.0 3.64e-01 94.8% 36.8%
3bb9B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 56.0 4.36e-01 94.8% 92.0%
1olzA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.65 54.0 3.20e-01 94.8% 16.0%
2gtlO02 2.40.128.620 Mainly Beta › Beta Barrel › Lipocalin › 0.65 53.0 3.96e-01 94.8% 49.7%
4pswB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.65 56.0 3.43e-01 98.3% 17.8%
5aj3Q00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 52.0 4.26e-01 89.7% 66.1%
2i9wA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 53.0 3.83e-01 93.1% 58.0%
3ub1D02 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 53.0 4.35e-01 94.8% 79.8%
1vqqA01 3.10.450.100 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › NTF2-like; domain 1 0.65 54.0 4.48e-01 96.6% 92.7%
4h3uA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 53.0 4.21e-01 96.6% 81.5%
3afcA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 54.0 3.18e-01 96.6% 15.2%
2kxgA00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 53.0 4.57e-01 94.8% 77.9%
2retA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.64 46.0 4.15e-01 87.9% 53.6%
5ig0A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 52.0 4.10e-01 94.8% 89.3%
7c5yA02 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 53.0 3.95e-01 94.8% 96.7%
3ec9A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 50.0 4.03e-01 94.8% 84.5%
2kf2A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.63 53.0 3.86e-01 96.6% 37.1%
2hqlA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 54.0 4.67e-01 98.3% 89.0%
3soyA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 50.0 3.89e-01 94.8% 83.8%
1wnhA02 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 50.0 4.10e-01 94.8% 65.0%
3qz4A00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.61 50.0 3.21e-01 94.8% 31.0%
3j7aV00 2.40.50.1000 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.61 48.0 3.68e-01 89.7% 48.6%
3ff2A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 50.0 4.10e-01 96.6% 94.0%
3hk4A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 50.0 4.05e-01 94.8% 89.0%
3g8zA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 48.0 3.92e-01 96.6% 84.4%
1luiA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.60 49.0 4.06e-01 93.1% 88.9%
3kojB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 52.0 4.57e-01 100.0% 84.4%
3en2A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 50.0 4.45e-01 100.0% 87.9%
3we5A00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.59 49.0 3.78e-01 94.8% 43.3%
7pkwA01 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 46.0 4.00e-01 93.1% 81.6%
3dm8A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 48.0 3.76e-01 94.8% 85.2%
3fgyA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 46.0 3.72e-01 94.8% 80.0%
1t17A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 49.0 3.76e-01 98.3% 43.2%
4j8tA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 47.0 3.82e-01 96.6% 89.1%
5da9A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 44.0 2.76e-01 84.5% 15.9%
3wasA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.57 47.0 2.93e-01 96.6% 14.9%
3fzxA00 2.40.360.20 Mainly Beta › Beta Barrel › YmcC-like fold › 0.57 48.0 3.32e-01 96.6% 45.8%
3wp4A00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.57 47.0 3.29e-01 100.0% 44.7%
3bcyA00 3.40.1000.40 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Respiratory growth induced protein 1 0.57 47.0 3.68e-01 100.0% 71.2%
1jssA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 46.0 3.36e-01 100.0% 48.7%
2f20A00 3.90.1680.10 Alpha Beta › Alpha-Beta Complex › hypothetical protein yedk fold › SOS response associated peptidase-like 0.56 46.0 3.09e-01 91.4% 51.1%
2bngC00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 45.0 3.58e-01 96.6% 72.1%
3ig4A02 3.90.230.10 Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily 0.55 47.0 3.16e-01 100.0% 43.5%
3caxA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.55 44.0 3.38e-01 89.7% 73.9%
1g0sA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.55 42.0 3.01e-01 87.9% 60.2%
2bbhA01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.55 48.0 3.58e-01 100.0% 72.8%
5bw0F00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.55 41.0 3.67e-01 87.9% 54.9%
1b7eA01 3.90.350.10 Alpha Beta › Alpha-Beta Complex › Transposase Inhibitor Protein From Tn5; Chain A, domain 1 › Transposase Inhibitor Protein From Tn5; Chain A, domain 1 0.54 44.0 3.03e-01 100.0% 32.5%
4ebrA00 3.30.1460.50 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.54 43.0 3.26e-01 93.1% 58.6%
1pn2B01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 41.0 3.18e-01 87.9% 59.5%
3bxoA02 2.20.130.10 Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains 0.53 39.0 3.94e-01 81.0% 86.4%
6lofA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.53 39.0 2.98e-01 82.8% 74.1%
1fmbA00 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.53 44.0 3.79e-01 100.0% 69.2%
1wznA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.53 38.0 3.92e-01 86.2% 85.7%
1tzzB01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.53 41.0 3.38e-01 89.7% 87.4%
4ghbA00 2.40.160.190 Mainly Beta › Beta Barrel › Porin › 0.52 44.0 2.91e-01 96.6% 46.7%
4kc3B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 41.0 3.52e-01 87.9% 90.5%
1ylxA00 3.30.70.1480 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like 0.52 37.0 3.27e-01 86.2% 47.5%
4ew7A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 43.0 3.54e-01 100.0% 75.2%
5uj1A03 2.70.20.10 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 0.50 41.0 3.02e-01 94.8% 79.5%
ECOD (88)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3699156 5.1.3.28 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 0.74 63.0 3.74e-01 94.8% 17.0%
3614080 11.10.1.5 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 0.74 61.0 4.38e-01 89.7% 48.8%
3689675 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.74 57.0 4.99e-01 82.8% 100.0%
4960252 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.70 60.0 4.83e-01 98.3% 98.3%
3453043 5.1.3.65 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 0.70 60.0 3.72e-01 94.8% 34.3%
3169095 2.1.1.4 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 0.68 54.0 4.73e-01 86.2% 82.4%
3188394 4.8.1.22 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 0.68 54.0 4.33e-01 89.7% 58.3%
3489010 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 56.0 4.35e-01 91.4% 63.2%
3932167 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.68 56.0 3.55e-01 96.6% 30.7%
3427602 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.68 56.0 3.56e-01 94.8% 22.9%
4932822 2.1.1.4 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 0.67 54.0 4.33e-01 87.9% 61.9%
3430247 2.1.1.4 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 0.67 53.0 4.36e-01 86.2% 66.3%
3440964 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.67 58.0 3.63e-01 98.3% 18.4%
4623792 243.1.1.34 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › YchJ_M-like 0.67 57.0 4.52e-01 98.3% 82.4%
3462235 243.3.1.19 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 0.67 55.0 5.05e-01 94.8% 98.8%
4807965 2.1.1.4 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 0.67 52.0 4.41e-01 86.2% 71.4%
3177561 5.1.7.2 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › Sortilin-Vps10 0.67 57.0 3.09e-01 94.8% 5.2%
4664932 243.1.1.34 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › YchJ_M-like 0.67 56.0 4.38e-01 94.8% 79.2%
3326194 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.67 53.0 4.29e-01 89.7% 99.1%
6391 243.1.1.28 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.66 56.0 4.43e-01 94.8% 93.4%
3402269 2.1.1.4 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 0.66 51.0 4.20e-01 86.2% 62.7%
5058112 881.1.1.1 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.66 56.0 4.26e-01 100.0% 54.7%
3345244 5.1.8.7 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 › FBA_1 0.66 53.0 4.03e-01 98.3% 36.6%
3432676 243.3.1.19 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 0.66 53.0 4.08e-01 94.8% 52.0%
3165037 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.66 56.0 4.21e-01 98.3% 71.3%
3488617 395.1.1.0 few secondary structure elements › Midkine-related › Midkine-related › Midkine-related 0.66 44.0 4.89e-01 74.1% 91.1%
4024062 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 51.0 4.78e-01 86.2% 90.5%
3251351 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.65 55.0 4.38e-01 94.8% 94.2%
3823551 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.65 53.0 4.10e-01 94.8% 57.2%
4600806 2.1.1.4 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 0.65 51.0 4.22e-01 87.9% 62.7%
4808081 2.1.1.4 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 0.65 51.0 4.20e-01 87.9% 63.6%
3273247 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.65 54.0 4.16e-01 100.0% 52.7%
3707903 2.1.1.4 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 0.64 51.0 3.64e-01 87.9% 38.3%
3451025 243.3.1.19 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 0.64 52.0 4.51e-01 96.6% 89.0%
3966871 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.64 54.0 4.19e-01 94.8% 60.8%
3188712 4.1.1.225 beta barrels › SH3 › SH3 › SH3 › DUF7025 0.64 51.0 4.32e-01 89.7% 66.0%
3269423 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.64 52.0 4.03e-01 100.0% 52.9%
3212863 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.63 54.0 3.40e-01 98.3% 18.1%
3227297 11.10.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.63 48.0 3.81e-01 86.2% 64.6%
4945010 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.63 55.0 3.44e-01 100.0% 36.1%
3287916 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.63 51.0 4.09e-01 96.6% 86.2%
3226366 206.1.1.20 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.62 52.0 3.20e-01 100.0% 24.8%
3690510 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.62 53.0 4.34e-01 98.3% 82.7%
169840 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.61 50.0 3.99e-01 96.6% 85.9%
3483729 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.61 49.0 3.91e-01 89.7% 93.3%
3683559 212.1.1.0 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like 0.61 49.0 3.33e-01 89.7% 31.4%
5055280 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.60 51.0 3.94e-01 100.0% 61.4%
4947640 4121.1.1.1 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.60 53.0 3.46e-01 100.0% 31.0%
4974400 4121.1.1.1 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.60 53.0 3.42e-01 100.0% 41.1%
3804776 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.59 50.0 3.21e-01 98.3% 18.4%
5018714 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.59 40.0 4.00e-01 77.6% 68.3%
3834272 5.1.5.96 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_3 0.59 45.0 2.94e-01 86.2% 27.1%
3738689 2.1.1.4 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 0.58 52.0 4.59e-01 100.0% 80.0%
3410286 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.58 42.0 3.69e-01 81.0% 55.8%
3607351 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.58 48.0 3.81e-01 100.0% 62.2%
3572164 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 43.0 3.74e-01 82.8% 94.7%
4026900 331.9.1.0 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.57 45.0 3.75e-01 91.4% 83.5%
3262164 4121.1.1.1 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.57 50.0 3.26e-01 100.0% 30.0%
4976136 331.10.2.0 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.57 48.0 4.19e-01 100.0% 78.9%
4990210 283.2.1.8 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › PF29994 0.57 44.0 3.83e-01 87.9% 90.5%
3794870 216.1.1.2 a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C 0.57 44.0 3.35e-01 91.4% 56.9%
4026988 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.56 46.0 3.15e-01 100.0% 28.1%
3821765 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.56 45.0 2.92e-01 96.6% 18.1%
5016617 4121.1.1.1 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.56 48.0 3.14e-01 100.0% 28.7%
3474976 331.9.1.0 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.55 45.0 3.66e-01 100.0% 62.3%
3479176 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.55 38.0 3.56e-01 81.0% 55.0%
3937237 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.55 44.0 3.25e-01 91.4% 57.6%
3498230 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.55 38.0 3.55e-01 81.0% 55.0%
3283672 4121.1.1.1 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.55 47.0 3.07e-01 100.0% 28.9%
4990980 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.55 44.0 3.92e-01 98.3% 71.6%
4879628 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.54 41.0 2.94e-01 87.9% 59.6%
3933484 241.1.1.2 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Autophagy_act_C 0.54 42.0 3.20e-01 93.1% 37.6%
3897847 216.1.1.2 a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C 0.54 43.0 3.16e-01 91.4% 55.0%
3230598 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.53 42.0 3.24e-01 93.1% 66.0%
3481504 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.53 44.0 3.57e-01 96.6% 84.2%
3780194 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.53 44.0 3.02e-01 100.0% 27.8%
4297447 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.53 45.0 3.47e-01 100.0% 43.6%
5013876 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.53 40.0 2.68e-01 86.2% 19.7%
3937910 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.53 38.0 3.50e-01 82.8% 68.2%
3972133 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.53 39.0 2.71e-01 86.2% 20.4%
3585861 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.52 44.0 3.42e-01 100.0% 49.3%
3515632 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.51 36.0 3.01e-01 81.0% 38.3%
3939569 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.51 38.0 3.44e-01 84.5% 71.8%
3938884 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.51 38.0 3.32e-01 87.9% 63.8%
4974362 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.51 38.0 2.54e-01 82.8% 19.4%
3931594 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.50 42.0 3.77e-01 100.0% 72.2%
4021885 4121.1.1.0 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.50 42.0 2.87e-01 100.0% 40.4%
3627506 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.50 37.0 3.19e-01 86.2% 57.3%