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BML_08182015_6_5m_scaffold_1_prodigal-single.1__X__X__00212

Bact-Vir

BML_08182015_6_5m_scaffold_1_prodigal-single.1__X__X__00212

Identity

Kingdom:
phage

Quality

86.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-54
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4hb9A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.73 63.0 3.75e-01 100.0% 95.7%
2el7A02 1.10.240.10 Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase 0.52 41.0 3.49e-01 94.1% 50.0%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3767822 3352.1.1.13 alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › TMTC_DUF1736 0.87 64.0 3.66e-01 80.4% 9.6%
4999868 604.1.1.264 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Oxidored_q2 0.82 67.0 5.36e-01 88.2% 48.9%
3382098 109.4.1.1257 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2 0.60 42.0 3.13e-01 70.6% 52.8%
3661592 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.57 44.0 2.95e-01 98.0% 50.9%
3660863 109.4.1.189 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 0.57 38.0 2.66e-01 70.6% 37.6%
3454002 109.4.1.1282 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, TPR_24 0.54 41.0 3.10e-01 100.0% 80.9%