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BML_08182015_6_5m_scaffold_1_prodigal-single.1__X__X__00295
Bact-VirBML_08182015_6_5m_scaffold_1_prodigal-single.1__X__X__00295
Identity
- Kingdom:
- phage
Quality
61.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-66
Domain cluster:
representative
CATH (79)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gmlA02 | 3.30.70.1560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Alpha-L RNA-binding motif | 0.79 | 66.0 | 5.64e-01 | 93.5% | 100.0% |
| 1vioA03 | 3.30.70.1560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Alpha-L RNA-binding motif | 0.78 | 67.0 | 5.61e-01 | 100.0% | 96.3% |
| 4limA00 | 3.90.920.10 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain | 0.75 | 63.0 | 3.66e-01 | 100.0% | 11.3% |
| 4njcA00 | 3.10.20.730 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNAP, epsilon subunit-like | 0.74 | 67.0 | 6.13e-01 | 100.0% | 91.7% |
| 1cc8A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.72 | 57.0 | 5.04e-01 | 91.3% | 97.2% |
| 2f4nA01 | 3.40.50.10790 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal | 0.72 | 60.0 | 4.13e-01 | 100.0% | 28.4% |
| 4iauA01 | 2.60.20.10 | Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins | 0.71 | 52.0 | 4.38e-01 | 97.8% | 46.2% |
| 2f4nB02 | 2.40.30.90 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like | 0.71 | 57.0 | 4.60e-01 | 91.3% | 69.1% |
| 4kncA02 | 2.60.120.1380 | Mainly Beta › Sandwich › Jelly Rolls › C-terminal carbohydrate-binding module | 0.70 | 60.0 | 4.47e-01 | 97.8% | 46.2% |
| 4pg4B03 | 3.30.70.3100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 60.0 | 5.16e-01 | 100.0% | 98.7% |
| 2k57A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 58.0 | 5.48e-01 | 93.5% | 96.4% |
| 1ltlA03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.69 | 59.0 | 5.83e-01 | 97.8% | 98.0% |
| 3b8fB00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.69 | 58.0 | 4.18e-01 | 100.0% | 38.7% |
| 5mj6A03 | 2.60.40.1910 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.68 | 58.0 | 4.89e-01 | 97.8% | 56.2% |
| 1y96A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 59.0 | 4.84e-01 | 100.0% | 68.6% |
| 1u1sA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 58.0 | 5.11e-01 | 95.7% | 74.2% |
| 1kq1H00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 55.0 | 4.86e-01 | 91.3% | 72.7% |
| 1jx4A04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.66 | 57.0 | 4.55e-01 | 100.0% | 58.2% |
| 1o5uA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.66 | 50.0 | 4.06e-01 | 97.8% | 43.2% |
| 2pstX00 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.66 | 46.0 | 4.24e-01 | 100.0% | 55.7% |
| 5o9iA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.66 | 57.0 | 3.91e-01 | 100.0% | 44.4% |
| 7bjkA02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.65 | 52.0 | 3.95e-01 | 97.8% | 37.2% |
| 5ja1B00 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.65 | 44.0 | 4.03e-01 | 95.7% | 51.5% |
| 6rptC00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 56.0 | 4.25e-01 | 100.0% | 44.6% |
| 3h8hA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.64 | 52.0 | 4.24e-01 | 93.5% | 93.5% |
| 3mfiA04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.64 | 52.0 | 4.05e-01 | 100.0% | 53.8% |
| 4u7cB04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.64 | 53.0 | 4.15e-01 | 100.0% | 56.0% |
| 1xvsA00 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.64 | 53.0 | 3.98e-01 | 97.8% | 44.7% |
| 7y8sB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 53.0 | 4.45e-01 | 100.0% | 53.6% |
| 6z9cA01 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.64 | 54.0 | 4.06e-01 | 100.0% | 45.9% |
| 1qr4A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 51.0 | 4.32e-01 | 100.0% | 51.7% |
| 3in6A02 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.63 | 54.0 | 4.09e-01 | 100.0% | 47.9% |
| 1unnC00 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.63 | 49.0 | 3.98e-01 | 100.0% | 52.3% |
| 3rj2X00 | 2.60.120.1150 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 52.0 | 3.84e-01 | 97.8% | 34.6% |
| 2n17A00 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.63 | 47.0 | 4.55e-01 | 93.5% | 71.4% |
| 3mb5A01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.63 | 51.0 | 4.68e-01 | 93.5% | 93.5% |
| 2bkfA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.62 | 50.0 | 4.33e-01 | 97.8% | 89.2% |
| 4uzgA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 50.0 | 3.58e-01 | 95.7% | 41.7% |
| 5hdwA00 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.62 | 53.0 | 3.90e-01 | 100.0% | 42.0% |
| 2piaA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.62 | 52.0 | 4.11e-01 | 100.0% | 60.6% |
| 2yn5A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 49.0 | 4.24e-01 | 95.7% | 54.4% |
| 6julA02 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.62 | 52.0 | 4.21e-01 | 100.0% | 59.4% |
| 2i02A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 51.0 | 3.75e-01 | 100.0% | 37.9% |
| 2asfA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.61 | 49.0 | 3.70e-01 | 95.7% | 49.6% |
| 3wqbA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.61 | 51.0 | 3.59e-01 | 97.8% | 75.9% |
| 4pofA03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.61 | 48.0 | 4.76e-01 | 97.8% | 98.0% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.60 | 48.0 | 3.44e-01 | 97.8% | 32.3% |
| 2pwyA01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.60 | 48.0 | 4.52e-01 | 89.1% | 100.0% |
| 3bn6A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.60 | 48.0 | 3.41e-01 | 95.7% | 56.3% |
| 2orzA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 49.0 | 3.49e-01 | 97.8% | 58.4% |
| 2mv2A00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.59 | 47.0 | 3.43e-01 | 95.7% | 33.8% |
| 4m0wA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 49.0 | 3.63e-01 | 100.0% | 42.3% |
| 2f1eA00 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.59 | 49.0 | 3.78e-01 | 100.0% | 55.2% |
| 3i6sA03 | 3.50.30.30 | Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › | 0.59 | 50.0 | 3.69e-01 | 100.0% | 100.0% |
| 4iajA00 | 3.30.1490.390 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Protein of unknown function DUF4649 | 0.59 | 50.0 | 4.30e-01 | 100.0% | 63.2% |
| 6b9tF01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 48.0 | 3.57e-01 | 97.8% | 35.2% |
| 2dlgA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 48.0 | 4.09e-01 | 95.7% | 58.7% |
| 8ezmH02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 47.0 | 3.69e-01 | 95.7% | 58.0% |
| 1ji6A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 48.0 | 3.46e-01 | 100.0% | 53.7% |
| 5jtwA03 | 2.60.40.1940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 47.0 | 3.62e-01 | 100.0% | 54.3% |
| 4jonC00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.58 | 47.0 | 3.59e-01 | 95.7% | 96.6% |
| 2jvuA00 | 2.60.40.2290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 46.0 | 3.83e-01 | 100.0% | 51.0% |
| 4r3dA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 49.0 | 3.58e-01 | 100.0% | 42.3% |
| 1yn3A00 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.57 | 44.0 | 3.73e-01 | 97.8% | 91.8% |
| 1et9A01 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.57 | 44.0 | 3.60e-01 | 97.8% | 88.2% |
| 1ca1A02 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.56 | 47.0 | 3.63e-01 | 100.0% | 47.5% |
| 4gxbA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.56 | 42.0 | 3.43e-01 | 84.8% | 86.6% |
| 2eenA00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.56 | 40.0 | 2.87e-01 | 84.8% | 94.9% |
| 3wdhA01 | 2.60.40.2320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 46.0 | 3.72e-01 | 97.8% | 85.4% |
| 1pqsA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.55 | 40.0 | 3.59e-01 | 95.7% | 51.9% |
| 3w42A00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.55 | 42.0 | 2.98e-01 | 100.0% | 30.7% |
| 7sz2A01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.54 | 41.0 | 3.51e-01 | 95.7% | 85.9% |
| 2yvsA01 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.53 | 45.0 | 3.43e-01 | 97.8% | 43.0% |
| 2lw3A00 | 2.60.40.2880 | Mainly Beta › Sandwich › Immunoglobulin-like › MmpS1-5, C-terminal soluble domain | 0.53 | 42.0 | 3.60e-01 | 100.0% | 76.7% |
| 4kh9B02 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.53 | 42.0 | 3.33e-01 | 97.8% | 46.0% |
| 7c2fB01 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.52 | 42.0 | 3.51e-01 | 95.7% | 98.8% |
| 1o5lA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 40.0 | 3.10e-01 | 97.8% | 38.0% |
| 6hj2A00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.51 | 44.0 | 2.78e-01 | 100.0% | 37.2% |
| 3iwzA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 39.0 | 3.00e-01 | 97.8% | 36.6% |
ECOD (83)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3969006 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.78 | 63.0 | 6.41e-01 | 91.3% | 100.0% |
| 4004704 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.78 | 63.0 | 6.41e-01 | 91.3% | 100.0% |
| 3637393 | 3792.1.1.2 ↗ | beta sandwiches › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › APC1_3rd | 0.78 | 58.0 | 4.61e-01 | 97.8% | 41.1% |
| 5014609 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.77 | 66.0 | 5.94e-01 | 97.8% | 93.8% |
| 5001166 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.77 | 66.0 | 4.75e-01 | 100.0% | 34.8% |
| 4007508 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.75 | 66.0 | 6.47e-01 | 100.0% | 94.0% |
| 3725727 | 3792.1.1.0 ↗ | beta sandwiches › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain | 0.75 | 56.0 | 4.54e-01 | 97.8% | 43.5% |
| 5011383 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.75 | 64.0 | 5.88e-01 | 97.8% | 96.7% |
| 3941506 | 2002.1.1.16 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase | 0.73 | 59.0 | 3.56e-01 | 100.0% | 12.8% |
| 3607227 | 4012.3.1.0 ↗ | a+b two layers › SSHS domain › SSHS domain in CRISPR-associated endonuclease Cas9 › SSHS domain in CRISPR-associated endonuclease Cas9 | 0.72 | 59.0 | 5.79e-01 | 89.1% | 100.0% |
| 4928795 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.72 | 58.0 | 5.86e-01 | 89.1% | 100.0% |
| 5143 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.72 | 57.0 | 5.04e-01 | 91.3% | 97.2% |
| 3917143 | 304.100.1.0 ↗ | a+b two layers › Alpha-beta plaits › PurS-like › PurS-like | 0.71 | 60.0 | 5.62e-01 | 100.0% | 96.7% |
| 5023503 | 304.110.1.0 ↗ | a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like | 0.71 | 62.0 | 5.43e-01 | 100.0% | 92.9% |
| 3216210 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.70 | 61.0 | 6.02e-01 | 100.0% | 98.0% |
| 4950570 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.70 | 57.0 | 5.20e-01 | 95.7% | 93.8% |
| 3888324 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.70 | 63.0 | 4.73e-01 | 100.0% | 52.4% |
| 4632256 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 57.0 | 4.96e-01 | 95.7% | 96.0% |
| 4463006 | 3115.2.1.0 ↗ | a+b two layers › GP2-like › GP2 › GP2 | 0.68 | 52.0 | 5.31e-01 | 89.1% | 100.0% |
| 3288892 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.68 | 57.0 | 5.74e-01 | 97.8% | 97.8% |
| 3797677 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.68 | 57.0 | 3.51e-01 | 97.8% | 96.6% |
| 4936431 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.67 | 56.0 | 4.91e-01 | 100.0% | 98.7% |
| 3507461 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.67 | 56.0 | 5.39e-01 | 97.8% | 96.4% |
| 3904649 | 12.5.1.2 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › GPS | 0.67 | 48.0 | 3.25e-01 | 100.0% | 20.0% |
| 4032055 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.67 | 53.0 | 4.85e-01 | 93.5% | 100.0% |
| 5019693 | 375.1.1.58 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › MCM_OB | 0.67 | 53.0 | 5.25e-01 | 93.5% | 100.0% |
| 4994372 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.66 | 57.0 | 4.27e-01 | 100.0% | 49.2% |
| 5007155 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.66 | 52.0 | 5.24e-01 | 95.7% | 93.3% |
| 4120000 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.65 | 58.0 | 4.24e-01 | 100.0% | 76.8% |
| 3603549 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 56.0 | 4.73e-01 | 97.8% | 78.2% |
| 3958896 | 4187.2.1.0 ↗ | a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 | 0.65 | 52.0 | 4.80e-01 | 89.1% | 75.0% |
| 3215161 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 53.0 | 4.44e-01 | 95.7% | 66.7% |
| 3166959 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.65 | 49.0 | 4.24e-01 | 89.1% | 88.7% |
| 3590658 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 52.0 | 4.75e-01 | 100.0% | 95.7% |
| 3573883 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.65 | 55.0 | 4.16e-01 | 100.0% | 48.8% |
| 3933380 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.65 | 55.0 | 4.23e-01 | 100.0% | 50.4% |
| 4980287 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.64 | 54.0 | 4.54e-01 | 100.0% | 54.1% |
| 3860541 | 72.1.1.1 ↗ | beta sandwiches › gamma-Crystallin-like › gamma-Crystallin-like › gamma-Crystallin-like › Crystall | 0.64 | 50.0 | 4.23e-01 | 100.0% | 49.4% |
| 3553026 | 221.1.1.4 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 | 0.64 | 52.0 | 4.28e-01 | 97.8% | 77.9% |
| 3320228 | 109.4.1.1285 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, Eplus_motif, E_motif | 0.64 | 52.0 | 2.92e-01 | 95.7% | 15.3% |
| 3695902 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.63 | 51.0 | 3.49e-01 | 100.0% | 47.7% |
| 3715676 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 51.0 | 4.21e-01 | 100.0% | 48.9% |
| 3281602 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.63 | 53.0 | 5.28e-01 | 100.0% | 93.8% |
| 4271892 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.63 | 52.0 | 3.98e-01 | 100.0% | 51.2% |
| 4450183 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.62 | 53.0 | 4.07e-01 | 100.0% | 49.6% |
| 3389402 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 52.0 | 3.97e-01 | 97.8% | 53.0% |
| 4025385 | 2003.1.5.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 | 0.62 | 51.0 | 3.46e-01 | 95.7% | 34.4% |
| 3955717 | 302.1.1.0 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain | 0.61 | 47.0 | 3.69e-01 | 95.7% | 57.6% |
| 2643927 | 224.1.1.2 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin | 0.61 | 44.0 | 3.64e-01 | 95.7% | 38.6% |
| 5061451 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.61 | 51.0 | 4.94e-01 | 100.0% | 83.6% |
| 4327417 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.61 | 50.0 | 3.92e-01 | 100.0% | 51.3% |
| 3443843 | 109.4.1.1291 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif | 0.61 | 49.0 | 2.79e-01 | 95.7% | 16.1% |
| 3594031 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.61 | 47.0 | 4.61e-01 | 95.7% | 90.9% |
| 3502158 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.60 | 47.0 | 3.43e-01 | 93.5% | 41.3% |
| 3352566 | 2487.1.1.7 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › PA | 0.60 | 50.0 | 3.33e-01 | 97.8% | 96.6% |
| 3804154 | 109.4.1.1383 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, Eplus_motif, E_motif | 0.60 | 48.0 | 2.95e-01 | 95.7% | 28.2% |
| 3535929 | 386.1.1.248 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_ZNF592 | 0.60 | 51.0 | 3.50e-01 | 100.0% | 27.4% |
| 3282305 | 4187.1.1.0 ↗ | a+b two layers › NosL/MerB-like › NosL/MerB-like › NosL/MerB-like | 0.60 | 48.0 | 4.33e-01 | 95.7% | 70.0% |
| 3383282 | 2487.1.1.7 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › PA | 0.60 | 51.0 | 3.64e-01 | 100.0% | 100.0% |
| 3296178 | 109.4.1.1476 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, DYW_deaminase, E_motif | 0.60 | 48.0 | 2.65e-01 | 95.7% | 12.2% |
| 3908804 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 44.0 | 3.44e-01 | 100.0% | 36.2% |
| 3596155 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.59 | 41.0 | 3.16e-01 | 73.9% | 87.0% |
| 3562433 | 10.32.1.2 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C | 0.59 | 47.0 | 3.35e-01 | 100.0% | 55.3% |
| 3378819 | 2487.1.1.0 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" | 0.59 | 49.0 | 3.57e-01 | 100.0% | 98.6% |
| 3420298 | 2487.1.1.7 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › PA | 0.59 | 48.0 | 3.54e-01 | 100.0% | 99.3% |
| 3329353 | 3164.1.1.3 ↗ | few secondary structure elements › Zinc-binding domain in Junin virus envelope glycoprotein › Zinc-binding domain in Junin virus envelope glycoprotein › Zinc-binding domain in Junin virus envelope glycoprotein › DYW_deaminase | 0.58 | 47.0 | 3.47e-01 | 95.7% | 68.9% |
| 3478442 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.58 | 46.0 | 2.95e-01 | 100.0% | 23.5% |
| 3808886 | 2487.1.1.7 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › PA | 0.58 | 49.0 | 3.69e-01 | 100.0% | 100.0% |
| 2559800 | 12.6.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related | 0.58 | 50.0 | 3.80e-01 | 97.8% | 88.3% |
| 4236893 | 2487.1.1.7 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › PA | 0.57 | 41.0 | 2.75e-01 | 84.8% | 65.2% |
| 3936814 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.57 | 45.0 | 3.70e-01 | 100.0% | 67.6% |
| 4332271 | 10.10.1.1 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT | 0.56 | 45.0 | 3.53e-01 | 100.0% | 46.3% |
| 3619202 | 10.10.1.0 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.56 | 49.0 | 4.07e-01 | 100.0% | 55.3% |
| 1878249 | 11.1.1.256 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PulA_N1 | 0.56 | 45.0 | 3.67e-01 | 93.5% | 52.1% |
| 3990561 | 11.1.1.955 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Fn3_Dep-1_4th | 0.56 | 46.0 | 3.72e-01 | 100.0% | 57.1% |
| 4215184 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.56 | 44.0 | 4.03e-01 | 100.0% | 100.0% |
| 4304758 | 2010.1.1.1 ↗ | a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › DegV | 0.55 | 46.0 | 3.22e-01 | 97.8% | 51.6% |
| 5041529 | 284.1.1.0 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like | 0.53 | 44.0 | 3.45e-01 | 100.0% | 87.6% |
| 3514951 | 223.1.1.102 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › VWA_N, PF30670 | 0.53 | 37.0 | 2.37e-01 | 80.4% | 51.2% |
| 3219446 | 10.4.1.9 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_2 | 0.52 | 44.0 | 3.43e-01 | 100.0% | 45.5% |
| 3555970 | 12.5.1.1 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5 | 0.52 | 44.0 | 3.07e-01 | 100.0% | 38.8% |
| 4662939 | 1077.1.1.1 ↗ | few secondary structure elements › RelA zinc-finger domain › RelA zinc-finger domain › RelA zinc-finger domain › RelA_RIS | 0.52 | 41.0 | 3.69e-01 | 93.5% | 98.6% |
| 3733429 | 11.1.1.908 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_CYK3_C | 0.51 | 40.0 | 3.10e-01 | 95.7% | 48.4% |
D2
high
residues 100-176
Domain cluster:
representative
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1azpA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.70 | 37.0 | 3.98e-01 | 94.8% | 59.1% |
| 1v43A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 39.0 | 4.33e-01 | 85.7% | 68.8% |
| 1g29102 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 37.0 | 4.71e-01 | 90.9% | 95.6% |
| 3fvqA03 | 2.40.50.470 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.66 | 34.0 | 3.91e-01 | 85.7% | 67.2% |
| 3f6gA01 | 3.30.160.740 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.62 | 45.0 | 5.01e-01 | 83.1% | 100.0% |
| 1oxxK02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 35.0 | 4.47e-01 | 85.7% | 97.8% |
| 4j31A00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.60 | 48.0 | 3.16e-01 | 90.9% | 64.5% |
| 7vljA01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.60 | 40.0 | 3.79e-01 | 84.4% | 57.0% |
| 6mv2A01 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 42.0 | 3.79e-01 | 100.0% | 55.9% |
| 2rqxA00 | 2.40.50.650 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 40.0 | 3.99e-01 | 71.4% | 86.4% |
| 1e8cA02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.58 | 40.0 | 2.86e-01 | 83.1% | 23.1% |
| 1ib8A02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.57 | 31.0 | 3.25e-01 | 92.2% | 55.2% |
| 2it1A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 36.0 | 4.03e-01 | 90.9% | 82.0% |
| 1kyfA01 | 2.60.40.1230 | Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain | 0.57 | 51.0 | 4.25e-01 | 100.0% | 77.6% |
| 2r5vA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.57 | 38.0 | 3.11e-01 | 72.7% | 36.0% |
| 3lm3A02 | 3.30.1120.110 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.56 | 43.0 | 3.85e-01 | 81.8% | 100.0% |
| 7obmA01 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.56 | 39.0 | 2.59e-01 | 72.7% | 23.1% |
| 4gnxB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 44.0 | 3.71e-01 | 92.2% | 52.5% |
| 4l5rC02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 47.0 | 4.48e-01 | 92.2% | 78.7% |
| 4fnvA02 | 2.70.98.70 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.55 | 43.0 | 3.00e-01 | 88.3% | 78.0% |
| 5zg8A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 46.0 | 4.18e-01 | 92.2% | 77.5% |
| 2dixA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.54 | 38.0 | 3.83e-01 | 79.2% | 74.4% |
| 3i7fA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 46.0 | 3.84e-01 | 96.1% | 89.8% |
| 3rn5A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 44.0 | 4.15e-01 | 92.2% | 76.1% |
| 4l5tB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 44.0 | 4.13e-01 | 92.2% | 76.9% |
| 4c12A02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.52 | 39.0 | 2.77e-01 | 80.5% | 31.9% |
| 4ix3A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 43.0 | 3.90e-01 | 98.7% | 81.4% |
| 6nrzA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 45.0 | 3.58e-01 | 96.1% | 81.3% |
| 3b77A01 | 2.30.29.50 | Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain | 0.51 | 39.0 | 3.61e-01 | 92.2% | 63.0% |
| 4joiA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 44.0 | 3.60e-01 | 93.5% | 54.6% |
| 1qs8A01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.51 | 38.0 | 3.05e-01 | 83.1% | 93.1% |
| 1pixA03 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.51 | 40.0 | 2.77e-01 | 88.3% | 84.6% |
| 1l0wA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 44.0 | 3.92e-01 | 93.5% | 73.6% |
| 5jmfA02 | 2.70.98.70 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.51 | 41.0 | 2.86e-01 | 89.6% | 63.8% |
| 6c1zA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 44.0 | 3.67e-01 | 97.4% | 70.3% |
| 2xqyA01 | 3.30.500.50 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.51 | 42.0 | 3.29e-01 | 93.5% | 59.0% |
| 3amuA02 | 2.40.50.1010 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.50 | 44.0 | 3.63e-01 | 96.1% | 81.6% |
| 2it9A00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.50 | 43.0 | 3.79e-01 | 100.0% | 95.8% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4357660 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.72 | 44.0 | 2.77e-01 | 72.7% | 12.5% |
| 3164388 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.72 | 40.0 | 4.42e-01 | 85.7% | 67.7% |
| 3385864 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.68 | 43.0 | 4.89e-01 | 85.7% | 83.3% |
| 4985279 | 319.1.1.4 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › ArsA_HSP20 | 0.67 | 46.0 | 4.61e-01 | 100.0% | 68.8% |
| 3832602 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.65 | 48.0 | 4.28e-01 | 79.2% | 68.2% |
| 3279517 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.65 | 49.0 | 2.88e-01 | 83.1% | 14.2% |
| 3387994 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.64 | 42.0 | 4.15e-01 | 72.7% | 63.7% |
| 3963617 | 2.4.1.4 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › FbpC_C_terminal | 0.64 | 36.0 | 3.97e-01 | 85.7% | 67.7% |
| 4497266 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.63 | 41.0 | 3.57e-01 | 72.7% | 44.7% |
| 3558557 | 330.16.1.0 ↗ | a+b two layers › dsRBD-like › ODA16 N-terminal domain › ODA16 N-terminal domain | 0.63 | 49.0 | 5.00e-01 | 96.1% | 89.3% |
| 4992039 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.62 | 37.0 | 3.80e-01 | 72.7% | 62.2% |
| 4644747 | 330.16.1.0 ↗ | a+b two layers › dsRBD-like › ODA16 N-terminal domain › ODA16 N-terminal domain | 0.62 | 49.0 | 4.85e-01 | 96.1% | 83.7% |
| 3965386 | 2.4.1.6 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › CysA_C_terminal | 0.62 | 42.0 | 3.64e-01 | 71.4% | 45.8% |
| 3436255 | 2.1.1.29 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep-A_N | 0.62 | 42.0 | 4.32e-01 | 70.1% | 100.0% |
| 3947186 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.61 | 41.0 | 3.50e-01 | 72.7% | 44.2% |
| 3974689 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.60 | 42.0 | 3.88e-01 | 75.3% | 57.9% |
| 4034138 | 7520.1.1.0 ↗ | a/b three-layered sandwiches › CinA-like › CinA-like › CinA-like | 0.60 | 44.0 | 3.75e-01 | 79.2% | 88.7% |
| 5081305 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.60 | 49.0 | 2.97e-01 | 90.9% | 22.7% |
| 5013360 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.60 | 40.0 | 3.75e-01 | 70.1% | 55.8% |
| 5001498 | 319.1.1.4 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › ArsA_HSP20 | 0.58 | 40.0 | 3.46e-01 | 97.4% | 45.8% |
| 4963351 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 42.0 | 3.61e-01 | 76.6% | 53.3% |
| 4943538 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.58 | 47.0 | 2.98e-01 | 100.0% | 16.7% |
| 4128144 | 2.4.1.7 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › OB_MalK | 0.58 | 40.0 | 3.45e-01 | 72.7% | 48.3% |
| 3234330 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.58 | 47.0 | 4.18e-01 | 89.6% | 68.2% |
| 3709800 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.58 | 43.0 | 4.10e-01 | 83.1% | 66.3% |
| 3280978 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.57 | 41.0 | 4.31e-01 | 75.3% | 91.4% |
| 3262317 | 318.1.1.0 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 | 0.56 | 45.0 | 4.55e-01 | 89.6% | 89.3% |
| 3172218 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.56 | 46.0 | 3.69e-01 | 88.3% | 59.3% |
| 3587844 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.56 | 47.0 | 4.24e-01 | 100.0% | 69.6% |
| 4068244 | 2484.1.1.49 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hydant_A_N | 0.56 | 47.0 | 3.90e-01 | 100.0% | 50.7% |
| 5043255 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 43.0 | 4.25e-01 | 93.5% | 78.8% |
| 5026433 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.55 | 43.0 | 4.06e-01 | 97.4% | 68.0% |
| 5043009 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.55 | 48.0 | 2.96e-01 | 100.0% | 19.2% |
| 4974151 | 319.1.1.3 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS | 0.55 | 38.0 | 3.65e-01 | 98.7% | 62.2% |
| 4941640 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.54 | 39.0 | 3.06e-01 | 75.3% | 51.6% |
| 4450167 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.54 | 42.0 | 2.91e-01 | 83.1% | 30.6% |
| 3952031 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.53 | 41.0 | 3.38e-01 | 100.0% | 49.6% |
| 3962325 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.53 | 40.0 | 3.37e-01 | 100.0% | 49.6% |
| 1270329 | 2003.1.2.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox | 0.53 | 40.0 | 3.40e-01 | 100.0% | 50.8% |
| 4934074 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 46.0 | 4.11e-01 | 97.4% | 87.3% |
| 4948189 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 42.0 | 3.75e-01 | 92.2% | 96.6% |
| 3479661 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.51 | 39.0 | 3.52e-01 | 84.4% | 58.2% |
| 3491188 | 149.1.1.0 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 | 0.51 | 44.0 | 2.93e-01 | 100.0% | 69.7% |
| 4165734 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.51 | 43.0 | 3.03e-01 | 93.5% | 29.6% |
| 4933539 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.51 | 45.0 | 3.28e-01 | 100.0% | 62.8% |
| 3867672 | 2.1.1.22 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › HIN | 0.50 | 40.0 | 4.21e-01 | 94.8% | 94.1% |
D3
medium
residues 332-460
Domain cluster:
representative