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BML_08182015_6_5m_scaffold_1_prodigal-single.1__X__X__00347
Bact-VirBML_08182015_6_5m_scaffold_1_prodigal-single.1__X__X__00347
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-60
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1nyaA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.65 | 50.0 | 3.71e-01 | 90.0% | 36.4% |
| 3uoeA01 | 1.10.1530.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical Oxidoreductase Yiak; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel | 0.60 | 49.0 | 4.38e-01 | 93.3% | 89.7% |
| 4gewA01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.59 | 39.0 | 3.69e-01 | 86.7% | 54.5% |
| 2hpiA03 | 1.10.10.1600 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Bacterial DNA polymerase III alpha subunit, thumb domain | 0.58 | 46.0 | 4.48e-01 | 95.0% | 90.1% |
| 3bujA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.56 | 48.0 | 2.89e-01 | 95.0% | 58.2% |
| 2l7rA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.55 | 41.0 | 3.91e-01 | 83.3% | 71.6% |
| 3p3lA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.55 | 47.0 | 2.85e-01 | 95.0% | 57.6% |
| 5ovnA03 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.54 | 43.0 | 3.85e-01 | 93.3% | 62.8% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4391273 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.70 | 47.0 | 4.16e-01 | 100.0% | 47.8% |
| 4580533 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.66 | 52.0 | 3.55e-01 | 88.3% | 27.1% |
| 3264177 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.62 | 50.0 | 4.77e-01 | 93.3% | 85.3% |
| 5039200 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.62 | 49.0 | 3.32e-01 | 90.0% | 27.0% |
| 4030988 | 6056.1.1.2 ↗ | alpha arrays › SP1917-like › SP1917-like › SP1917-like › PrmC_N | 0.57 | 44.0 | 4.20e-01 | 88.3% | 85.3% |
| 4995939 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.56 | 42.0 | 3.59e-01 | 95.0% | 47.6% |
| 3417644 | 105.1.1.83 ↗ | alpha duplicates or obligate multimers › HLH-like › HLH, helix-loop-helix DNA-binding domain › HLH, helix-loop-helix DNA-binding domain › Sulfate_transp | 0.56 | 46.0 | 3.20e-01 | 91.7% | 55.2% |
| 167803 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.56 | 48.0 | 2.89e-01 | 95.0% | 58.2% |
| 3651470 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.55 | 43.0 | 3.43e-01 | 88.3% | 43.8% |
| 3593474 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.54 | 42.0 | 3.08e-01 | 95.0% | 91.9% |
| 3419530 | 304.7.1.2 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Inhibitor_I9 | 0.54 | 42.0 | 3.79e-01 | 98.3% | 61.1% |
| 3849756 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.53 | 42.0 | 4.00e-01 | 93.3% | 73.3% |
| 4058620 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.51 | 43.0 | 3.73e-01 | 98.3% | 67.0% |
| 3378851 | 304.7.1.2 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Inhibitor_I9 | 0.51 | 40.0 | 3.75e-01 | 96.7% | 71.2% |
D2
medium
residues 61-123
Domain cluster:
rep: PH2015_20_sub10_scaffold_1_prodigal-single.1__X__X__00288__D53-112
CATH (61)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4qmfD02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.68 | 58.0 | 5.25e-01 | 100.0% | 89.1% |
| 3tj8A02 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.68 | 51.0 | 4.88e-01 | 81.0% | 71.6% |
| 2ba0A03 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.66 | 57.0 | 5.25e-01 | 100.0% | 95.2% |
| 1whvA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.65 | 48.0 | 4.17e-01 | 81.0% | 63.0% |
| 2ja9A02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.64 | 55.0 | 5.10e-01 | 100.0% | 90.5% |
| 2dgtA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.64 | 50.0 | 4.82e-01 | 85.7% | 87.7% |
| 3l09A03 | 3.30.70.2670 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 43.0 | 4.73e-01 | 79.4% | 93.6% |
| 2d1cA02 | 3.30.70.1570 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 47.0 | 3.99e-01 | 81.0% | 76.6% |
| 4hkqA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.64 | 50.0 | 3.89e-01 | 87.3% | 49.3% |
| 1earA02 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.64 | 48.0 | 4.68e-01 | 81.0% | 73.9% |
| 1rkiA01 | 3.30.70.1650 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › PDO, CxxC motif | 0.64 | 48.0 | 4.20e-01 | 82.5% | 62.9% |
| 2ebbA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.63 | 51.0 | 4.46e-01 | 90.5% | 74.0% |
| 3ezjA03 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.63 | 47.0 | 4.98e-01 | 85.7% | 96.4% |
| 3dgpB00 | 3.30.70.1220 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › TFB5-like | 0.62 | 47.0 | 4.74e-01 | 92.1% | 82.5% |
| 1yqhA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 48.0 | 4.13e-01 | 85.7% | 57.7% |
| 1wg4A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.62 | 47.0 | 4.49e-01 | 84.1% | 79.2% |
| 1dcoA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.61 | 49.0 | 4.30e-01 | 90.5% | 70.7% |
| 2fgcA03 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.61 | 46.0 | 4.36e-01 | 82.5% | 71.1% |
| 1wf1A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.61 | 46.0 | 4.19e-01 | 84.1% | 70.0% |
| 2phcB01 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.61 | 48.0 | 4.47e-01 | 90.5% | 83.1% |
| 1lxjA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 49.0 | 4.24e-01 | 90.5% | 61.2% |
| 4erdA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.61 | 46.0 | 3.97e-01 | 85.7% | 61.1% |
| 6e4nA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.61 | 47.0 | 4.62e-01 | 88.9% | 88.7% |
| 6u9hF02 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.60 | 46.0 | 4.39e-01 | 87.3% | 74.0% |
| 4dezA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.60 | 47.0 | 4.17e-01 | 90.5% | 64.6% |
| 2iboA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 47.0 | 4.29e-01 | 90.5% | 69.7% |
| 1lfpA03 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.59 | 45.0 | 4.41e-01 | 92.1% | 75.3% |
| 1a7jA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 43.0 | 2.93e-01 | 92.1% | 18.3% |
| 2kviA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.59 | 43.0 | 4.18e-01 | 82.5% | 74.0% |
| 4p72A04 | 3.30.56.10 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › | 0.59 | 50.0 | 4.76e-01 | 98.4% | 90.8% |
| 2rhqB01 | 3.30.56.10 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › | 0.59 | 48.0 | 4.71e-01 | 95.2% | 98.6% |
| 4tshB01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 43.0 | 3.22e-01 | 81.0% | 54.3% |
| 1dq3A03 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.58 | 41.0 | 3.82e-01 | 77.8% | 63.2% |
| 3pcoB04 | 3.30.56.10 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › | 0.58 | 46.0 | 4.44e-01 | 92.1% | 88.0% |
| 1kafA00 | 3.90.1150.20 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription regulator MotA, C-terminal domain | 0.58 | 44.0 | 3.88e-01 | 88.9% | 95.4% |
| 4mo0A00 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.58 | 45.0 | 4.22e-01 | 92.1% | 69.6% |
| 3aqoA01 | 3.30.70.3400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 44.0 | 4.14e-01 | 85.7% | 85.0% |
| 2cveA02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 45.0 | 4.49e-01 | 90.5% | 87.9% |
| 5yk4A04 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.57 | 40.0 | 3.16e-01 | 73.0% | 47.1% |
| 1mw7A03 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.57 | 43.0 | 4.13e-01 | 87.3% | 81.3% |
| 1vk8A00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 45.0 | 4.03e-01 | 90.5% | 64.5% |
| 4i0wA00 | 3.30.70.2980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 41.0 | 3.73e-01 | 87.3% | 55.4% |
| 1konA03 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.57 | 42.0 | 4.08e-01 | 92.1% | 72.0% |
| 5hnmC00 | 3.30.1380.10 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › | 0.56 | 41.0 | 3.10e-01 | 81.0% | 88.2% |
| 1s7hA02 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 44.0 | 4.15e-01 | 92.1% | 73.2% |
| 4e1oA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.56 | 44.0 | 3.92e-01 | 92.1% | 68.4% |
| 2eyqA07 | 3.90.1150.50 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription-repair-coupling factor, D7 domain | 0.54 | 42.0 | 3.36e-01 | 90.5% | 42.2% |
| 1zpwX00 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 41.0 | 3.79e-01 | 92.1% | 63.4% |
| 3thxB04 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.54 | 37.0 | 3.09e-01 | 74.6% | 49.2% |
| 6k2eA01 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 39.0 | 3.90e-01 | 92.1% | 75.0% |
| 3v8vA01 | 3.30.2130.30 | Alpha Beta › 2-Layer Sandwich › VC0802-like › | 0.53 | 44.0 | 3.17e-01 | 100.0% | 97.2% |
| 3r5gA00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.53 | 43.0 | 3.19e-01 | 98.4% | 96.9% |
| 1oaoC03 | 3.30.1650.10 | Alpha Beta › 2-Layer Sandwich › Bifunctional carbon monoxide dehydrogenase/acetyl-coa synthase(codh/acs), Chain M, domain 3 › Bifunctional carbon monoxide dehydrogenase/acetyl-coa synthase(codh/acs), Chain M, domain 3 | 0.53 | 42.0 | 3.20e-01 | 95.2% | 64.8% |
| 4fqdA01 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.52 | 45.0 | 3.18e-01 | 100.0% | 29.2% |
| 3lduA01 | 3.30.2130.30 | Alpha Beta › 2-Layer Sandwich › VC0802-like › | 0.52 | 44.0 | 3.27e-01 | 98.4% | 98.9% |
| 2p92A00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.52 | 39.0 | 3.55e-01 | 85.7% | 71.6% |
| 4fe9A01 | 2.60.40.3640 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 40.0 | 3.35e-01 | 87.3% | 74.2% |
| 5a72A00 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.52 | 37.0 | 2.92e-01 | 79.4% | 38.2% |
| 2xvlA03 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 42.0 | 2.72e-01 | 100.0% | 87.9% |
| 1ewqA04 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.50 | 34.0 | 2.82e-01 | 73.0% | 45.6% |
| 5gt8D02 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.50 | 36.0 | 3.05e-01 | 81.0% | 46.7% |
ECOD (86)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5046059 | 327.11.2.83 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_DUF2096_C | 0.69 | 54.0 | 5.76e-01 | 87.3% | 96.4% |
| 5040118 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.67 | 52.0 | 5.06e-01 | 87.3% | 75.7% |
| 3967597 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.67 | 58.0 | 5.35e-01 | 100.0% | 97.6% |
| 4217450 | 304.22.1.1 ↗ | a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C | 0.66 | 49.0 | 4.80e-01 | 81.0% | 72.9% |
| 3539441 | 304.9.1.15 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RNA_bind | 0.66 | 49.0 | 4.41e-01 | 81.0% | 71.1% |
| 134075 | 304.9.1.15 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RNA_bind | 0.66 | 49.0 | 4.22e-01 | 81.0% | 63.7% |
| 5026344 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.65 | 50.0 | 5.03e-01 | 85.7% | 84.6% |
| 4327478 | 304.162.1.0 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain | 0.65 | 49.0 | 4.90e-01 | 84.1% | 90.8% |
| 5063278 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.64 | 48.0 | 4.85e-01 | 85.7% | 81.5% |
| 5040326 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.64 | 47.0 | 4.67e-01 | 81.0% | 92.3% |
| 3391104 | 327.11.2.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_6 | 0.64 | 56.0 | 5.32e-01 | 100.0% | 100.0% |
| 4936417 | 304.26.1.3 ↗ | a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › DUF2102 | 0.64 | 48.0 | 4.17e-01 | 90.5% | 50.5% |
| 4953268 | 327.11.2.83 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_DUF2096_C | 0.64 | 47.0 | 4.71e-01 | 81.0% | 80.0% |
| 4975038 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.64 | 49.0 | 4.91e-01 | 90.5% | 83.1% |
| 4174001 | 304.22.1.1 ↗ | a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C | 0.64 | 48.0 | 4.76e-01 | 81.0% | 78.5% |
| 4960543 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.64 | 48.0 | 4.97e-01 | 92.1% | 88.3% |
| 5033333 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.64 | 47.0 | 4.71e-01 | 90.5% | 80.0% |
| 4938146 | 2003.1.5.6 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltr_RsmB-F | 0.64 | 48.0 | 3.13e-01 | 82.5% | 18.3% |
| 3589856 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.63 | 48.0 | 4.83e-01 | 90.5% | 83.1% |
| 4576277 | 304.22.1.1 ↗ | a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C | 0.63 | 47.0 | 4.59e-01 | 81.0% | 72.9% |
| 5293 | 304.22.1.1 ↗ | a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C | 0.63 | 47.0 | 4.66e-01 | 81.0% | 75.0% |
| 4948608 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.63 | 49.0 | 4.89e-01 | 90.5% | 84.6% |
| 5022563 | 327.11.2.83 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_DUF2096_C | 0.63 | 56.0 | 5.58e-01 | 100.0% | 98.5% |
| 4461494 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.63 | 45.0 | 4.53e-01 | 90.5% | 76.9% |
| 5036777 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.63 | 48.0 | 4.64e-01 | 88.9% | 73.3% |
| 5080599 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.62 | 49.0 | 4.87e-01 | 87.3% | 87.7% |
| 3589166 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.62 | 46.0 | 4.76e-01 | 92.1% | 86.7% |
| 4973780 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.62 | 48.0 | 3.17e-01 | 85.7% | 19.0% |
| 4988867 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.62 | 46.0 | 4.61e-01 | 92.1% | 80.0% |
| 4973973 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.62 | 50.0 | 4.85e-01 | 90.5% | 84.3% |
| 4249416 | 304.22.1.1 ↗ | a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C | 0.62 | 46.0 | 4.47e-01 | 81.0% | 72.9% |
| 5030234 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.62 | 48.0 | 4.76e-01 | 90.5% | 82.9% |
| 4938386 | 304.120.1.5 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › RlmL_1st | 0.62 | 47.0 | 4.83e-01 | 84.1% | 88.3% |
| 5047912 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.62 | 48.0 | 4.83e-01 | 87.3% | 84.6% |
| 4973800 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.61 | 47.0 | 4.66e-01 | 85.7% | 81.5% |
| 3248261 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.61 | 49.0 | 4.78e-01 | 92.1% | 82.9% |
| 3700851 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.61 | 47.0 | 4.23e-01 | 85.7% | 71.1% |
| 4988554 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.61 | 47.0 | 4.71e-01 | 90.5% | 84.6% |
| 4937548 | 304.54.1.0 ↗ | a+b two layers › Alpha-beta plaits › CcmK-like › CcmK-like | 0.61 | 47.0 | 4.88e-01 | 85.7% | 98.2% |
| 3907339 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.61 | 45.0 | 3.11e-01 | 82.5% | 51.4% |
| 3223769 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.61 | 48.0 | 4.88e-01 | 87.3% | 100.0% |
| 3959992 | 304.121.1.0 ↗ | a+b two layers › Alpha-beta plaits › SP0830-like › SP0830-like | 0.61 | 48.0 | 4.77e-01 | 90.5% | 86.2% |
| 5051914 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.61 | 48.0 | 4.74e-01 | 92.1% | 85.7% |
| 5069719 | 306.3.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 | 0.61 | 45.0 | 4.17e-01 | 87.3% | 61.2% |
| 5071118 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.60 | 45.0 | 4.53e-01 | 85.7% | 86.2% |
| 4115093 | 304.120.1.5 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › RlmL_1st | 0.60 | 45.0 | 4.62e-01 | 84.1% | 86.7% |
| 5041665 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.60 | 46.0 | 4.50e-01 | 90.5% | 78.6% |
| 4081991 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.60 | 48.0 | 4.96e-01 | 92.1% | 98.3% |
| 5076647 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.60 | 46.0 | 4.49e-01 | 92.1% | 78.6% |
| 5050437 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.60 | 45.0 | 4.53e-01 | 90.5% | 81.5% |
| 4049038 | 304.120.1.5 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › RlmL_1st | 0.60 | 45.0 | 4.59e-01 | 84.1% | 86.7% |
| 3249368 | 304.108.1.0 ↗ | a+b two layers › Alpha-beta plaits › Monooxygenase (hydroxylase) regulatory protein › Monooxygenase (hydroxylase) regulatory protein | 0.60 | 50.0 | 4.59e-01 | 93.7% | 90.6% |
| 4983785 | 304.6.1.1 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C | 0.60 | 50.0 | 3.45e-01 | 96.8% | 45.4% |
| 4101997 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.59 | 44.0 | 4.29e-01 | 81.0% | 80.0% |
| 4940659 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.59 | 46.0 | 4.50e-01 | 90.5% | 80.0% |
| 3404332 | 304.7.1.1 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Propep_M14 | 0.59 | 44.0 | 3.97e-01 | 81.0% | 62.2% |
| 3612001 | 304.164.1.0 ↗ | a+b two layers › Alpha-beta plaits › Hypothetical protein NegoA.19184.a C-terminal domain › Hypothetical protein NegoA.19184.a C-terminal domain | 0.59 | 46.0 | 4.33e-01 | 87.3% | 71.2% |
| 5045691 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.59 | 46.0 | 4.49e-01 | 92.1% | 81.4% |
| 3308472 | 304.9.1.102 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_NFXL1 | 0.59 | 44.0 | 4.14e-01 | 84.1% | 73.8% |
| 5067490 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.59 | 45.0 | 4.53e-01 | 90.5% | 86.2% |
| 5048601 | 306.3.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 | 0.59 | 45.0 | 3.96e-01 | 87.3% | 54.5% |
| 2074659 | 304.120.1.5 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › RlmL_1st | 0.59 | 44.0 | 4.50e-01 | 84.1% | 85.2% |
| 4958999 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.59 | 45.0 | 4.54e-01 | 90.5% | 86.2% |
| 4886247 | 4143.1.1.10 ↗ | a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › RlmL_1st | 0.59 | 44.0 | 4.50e-01 | 84.1% | 86.7% |
| 4206076 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.59 | 42.0 | 4.25e-01 | 81.0% | 86.2% |
| 3633917 | 304.7.1.21 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › PF30773 | 0.58 | 43.0 | 3.86e-01 | 82.5% | 55.8% |
| 4042122 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.58 | 43.0 | 4.28e-01 | 87.3% | 77.1% |
| 3789263 | 601.23.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_III | 0.58 | 39.0 | 2.60e-01 | 71.4% | 22.7% |
| 3475962 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.58 | 44.0 | 3.98e-01 | 87.3% | 63.2% |
| 4661896 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.58 | 44.0 | 4.40e-01 | 87.3% | 84.6% |
| 4059719 | 304.9.1.61 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › Thc1_RRM | 0.58 | 44.0 | 4.22e-01 | 85.7% | 80.0% |
| 4077183 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.58 | 44.0 | 4.30e-01 | 87.3% | 78.6% |
| 5070538 | 3501.1.1.1 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 | 0.57 | 46.0 | 4.51e-01 | 92.1% | 91.4% |
| 4121019 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.57 | 45.0 | 4.48e-01 | 87.3% | 84.6% |
| 4963243 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.57 | 43.0 | 4.23e-01 | 87.3% | 77.1% |
| 4231349 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.57 | 43.0 | 4.24e-01 | 87.3% | 78.6% |
| 4959531 | 3501.1.1.0 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 | 0.57 | 44.0 | 4.38e-01 | 88.9% | 95.4% |
| 4356131 | 304.56.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › CRISPR_Cas2 | 0.57 | 42.0 | 3.92e-01 | 92.1% | 61.2% |
| 5046128 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.57 | 43.0 | 4.21e-01 | 92.1% | 74.7% |
| 5040370 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.57 | 44.0 | 4.31e-01 | 95.2% | 80.0% |
| 1956182 | 304.164.1.0 ↗ | a+b two layers › Alpha-beta plaits › Hypothetical protein NegoA.19184.a C-terminal domain › Hypothetical protein NegoA.19184.a C-terminal domain | 0.56 | 43.0 | 4.23e-01 | 87.3% | 76.4% |
| 4556494 | 304.56.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › CRISPR_Cas2 | 0.56 | 43.0 | 3.88e-01 | 90.5% | 58.1% |
| 4070496 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.55 | 41.0 | 4.00e-01 | 87.3% | 73.3% |
| 3291522 | 304.154.1.0 ↗ | a+b two layers › Alpha-beta plaits › Regulator of polyketide synthase expression N-terminal domain › Regulator of polyketide synthase expression N-terminal domain | 0.54 | 42.0 | 3.35e-01 | 90.5% | 54.7% |
| 4651803 | 304.56.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › CRISPR_Cas2 | 0.54 | 40.0 | 3.63e-01 | 92.1% | 57.0% |
| 3252775 | 3696.1.1.0 ↗ | a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related | 0.53 | 39.0 | 3.85e-01 | 96.8% | 75.7% |