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BML_08182015_6_5m_scaffold_1_prodigal-single.1__X__X__00365

Bact-Vir

BML_08182015_6_5m_scaffold_1_prodigal-single.1__X__X__00365

Identity

Kingdom:
phage

Quality

94.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-74
PDB
Domain cluster: representative
CATH (77)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3hrgA01 3.30.420.250 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, N-terminal domain 0.67 47.0 3.80e-01 83.6% 37.8%
4u7cB04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.67 52.0 4.58e-01 84.9% 94.5%
4ushA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 46.0 4.21e-01 100.0% 53.4%
3c19A01 3.30.70.1380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transcriptional regulatory protein pf0864 domain like 0.66 52.0 4.77e-01 100.0% 64.6%
2khdA00 3.30.70.860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 47.0 4.18e-01 100.0% 52.8%
1sqeA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 51.0 4.63e-01 100.0% 63.4%
4dmzA02 3.30.70.2880 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 45.0 3.71e-01 100.0% 40.9%
4d53A00 3.40.33.10 Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP 0.62 49.0 4.05e-01 86.3% 54.1%
3uebF00 3.30.300.100 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › MTH677-like 0.62 53.0 4.84e-01 100.0% 76.0%
3p96A02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.62 47.0 4.52e-01 100.0% 72.6%
3gz7B00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 48.0 4.40e-01 100.0% 64.3%
2x3gA00 3.30.70.1910 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 44.0 3.83e-01 100.0% 48.3%
1ygyA04 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.61 43.0 4.25e-01 100.0% 71.1%
2pgcA02 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 49.0 4.43e-01 100.0% 63.2%
1y7pB01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.61 45.0 4.47e-01 100.0% 75.0%
1q2lA02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.60 53.0 3.76e-01 100.0% 34.6%
3c0wA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.60 43.0 3.77e-01 98.6% 47.5%
1iujA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 46.0 4.22e-01 100.0% 61.8%
3nlcA01 3.30.70.2700 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 47.0 4.71e-01 100.0% 86.8%
3e4pA03 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.59 46.0 3.99e-01 82.2% 89.9%
4qjvB00 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.59 44.0 4.12e-01 100.0% 62.8%
3oh8A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 51.0 4.22e-01 100.0% 83.6%
1tz0B00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 48.0 4.47e-01 100.0% 71.1%
2pgcC01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 47.0 4.40e-01 100.0% 69.1%
6lpnA04 3.30.70.2740 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 43.0 4.05e-01 100.0% 62.1%
1lq9A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 46.0 4.09e-01 100.0% 58.0%
1fp5A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 51.0 4.65e-01 100.0% 80.0%
2f1fA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.58 42.0 4.17e-01 100.0% 73.4%
5ixuA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 46.0 4.23e-01 100.0% 64.7%
2rilA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 48.0 4.44e-01 100.0% 72.6%
3kg0A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 46.0 4.27e-01 100.0% 68.0%
3nr5A00 3.40.1000.50 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Repressor of RNA polymerase III transcription Maf1 0.58 45.0 3.57e-01 84.9% 83.4%
2ogkD00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.57 50.0 4.07e-01 100.0% 70.4%
4dn9B00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 42.0 3.94e-01 100.0% 61.9%
3fgvA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 45.0 4.24e-01 100.0% 71.0%
3ijtB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 49.0 4.01e-01 100.0% 83.9%
7k0xA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 46.0 4.57e-01 100.0% 85.9%
2bbeA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 44.0 3.98e-01 100.0% 61.2%
2nzcB00 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.56 41.0 4.01e-01 100.0% 71.6%
4bbyA05 3.30.300.330 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › 0.56 48.0 4.30e-01 100.0% 69.4%
4lr4A01 2.60.120.1420 Mainly Beta › Sandwich › Jelly Rolls › 0.56 44.0 3.35e-01 100.0% 35.8%
1l1lA03 3.90.1390.10 Alpha Beta › Alpha-Beta Complex › b-12 dependent (class ii) ribonucleotide reductase, chain A, domain 3 › b-12 dependent (class ii) ribonucleotide reductase, chain A, domain 3 0.56 37.0 3.44e-01 97.3% 53.2%
6ofsA04 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.56 48.0 3.67e-01 100.0% 41.3%
2od6C00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 47.0 4.26e-01 100.0% 67.3%
2jdjA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 44.0 4.07e-01 100.0% 65.4%
4dpoB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 45.0 4.13e-01 100.0% 67.3%
1vm0A00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.56 39.0 3.67e-01 89.0% 59.1%
2mq8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.55 43.0 3.83e-01 100.0% 58.0%
4djbA00 3.30.70.2870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 0.55 48.0 4.14e-01 100.0% 62.7%
3bdeB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 46.0 4.26e-01 100.0% 72.7%
6c6uN00 3.30.70.940 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain 0.54 38.0 3.58e-01 100.0% 58.2%
3g2fA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 39.0 3.69e-01 95.9% 64.4%
2fb0A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 43.0 4.02e-01 100.0% 71.3%
3u02A01 3.30.70.2200 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 44.0 3.61e-01 100.0% 47.9%
6c98A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 46.0 4.32e-01 100.0% 78.0%
6hhnA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 41.0 3.90e-01 100.0% 69.6%
4lvnP00 3.30.70.2380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 40.0 3.95e-01 100.0% 75.3%
3u83A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 45.0 4.11e-01 97.3% 72.3%
3pxpA02 3.30.450.180 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.53 45.0 3.40e-01 100.0% 84.4%
3go9A02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.53 46.0 3.36e-01 100.0% 87.6%
3fpwA01 3.30.450.150 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Haem-degrading domain 0.53 40.0 3.46e-01 84.9% 90.4%
2jzxA02 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.53 40.0 3.97e-01 100.0% 79.7%
2ab5B01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.53 40.0 3.48e-01 100.0% 50.0%
3bp6B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 44.0 4.18e-01 100.0% 78.4%
2lu1A00 3.30.70.2370 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 44.0 4.16e-01 100.0% 79.8%
4bs9A03 3.30.1330.230 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › 0.52 43.0 3.58e-01 97.3% 58.6%
2wnyA00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.52 44.0 3.70e-01 100.0% 69.3%
3gkuA03 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.52 33.0 3.39e-01 83.6% 66.2%
1x8dA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 41.0 3.85e-01 100.0% 70.1%
1mwqA00 3.30.70.1060 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel 0.51 43.0 3.93e-01 100.0% 71.0%
2fh5A01 3.30.450.60 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.51 45.0 3.77e-01 95.9% 93.4%
3amiA02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.51 44.0 3.30e-01 100.0% 41.7%
4i0kA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 44.0 4.12e-01 100.0% 78.9%
3bguA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 43.0 4.01e-01 100.0% 75.0%
2petA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 44.0 3.83e-01 100.0% 76.7%
2anrA02 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.50 37.0 3.77e-01 100.0% 81.3%
2ednA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 44.0 3.76e-01 98.6% 73.7%
ECOD (92)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5043269 304.130.1.1 a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion 0.71 52.0 4.96e-01 100.0% 67.1%
4944755 304.130.1.1 a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion 0.70 52.0 4.87e-01 100.0% 64.4%
4664239 304.130.1.1 a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion 0.70 52.0 4.87e-01 100.0% 64.4%
3931530 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.69 52.0 4.52e-01 82.2% 55.9%
4951741 304.130.1.1 a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion 0.69 51.0 4.83e-01 100.0% 64.4%
4990360 304.39.1.0 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.69 54.0 5.27e-01 100.0% 77.5%
4587011 304.9.1.1 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.68 52.0 5.02e-01 100.0% 71.8%
4967300 304.130.1.1 a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion 0.68 51.0 4.87e-01 100.0% 68.2%
3992804 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.68 50.0 4.38e-01 79.5% 51.8%
4947614 304.130.1.1 a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion 0.68 52.0 4.89e-01 100.0% 67.8%
1144831 2484.1.1.63 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF3822 0.67 47.0 3.70e-01 83.6% 34.6%
5084002 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.67 53.0 4.34e-01 86.3% 71.1%
5046778 304.130.1.1 a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion 0.67 50.0 4.51e-01 100.0% 58.0%
3604508 304.8.1.4 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.67 51.0 4.78e-01 100.0% 67.8%
4184306 304.130.1.1 a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion 0.65 50.0 4.71e-01 100.0% 67.8%
138425 304.4.1.4 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM 0.64 50.0 4.45e-01 100.0% 58.2%
3706456 304.55.2.8 a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like › FAZ1_cons 0.63 53.0 5.01e-01 100.0% 77.8%
4604143 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.63 43.0 3.12e-01 100.0% 24.9%
2777205 304.159.1.1 a+b two layers › Alpha-beta plaits › Alpha-beta plait domain in NisB › Alpha-beta plait domain in NisB › Lant_dehydr_C 0.63 48.0 4.53e-01 100.0% 66.7%
4614439 304.117.1.1 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg 0.63 47.0 4.57e-01 100.0% 73.8%
3488697 5001.1.1.0 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.63 52.0 3.42e-01 95.9% 70.3%
5053097 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.63 50.0 4.66e-01 100.0% 68.4%
4536686 304.120.1.6 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer 0.62 47.0 4.58e-01 100.0% 75.0%
3513788 886.1.1.2 a+b duplicates or obligate multimers › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain › GyrI-like 0.62 51.0 4.09e-01 95.9% 44.5%
4105022 304.5.1.7 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.61 44.0 4.14e-01 100.0% 62.2%
4540833 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.61 48.0 4.64e-01 100.0% 76.5%
146703 304.4.1.25 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › DUF6854 0.61 49.0 4.46e-01 100.0% 64.4%
4022825 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.61 49.0 4.39e-01 100.0% 62.9%
4230728 304.4.1.70 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › PF29828 0.60 49.0 4.16e-01 93.2% 78.5%
3932886 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.60 50.0 4.66e-01 100.0% 73.7%
4089718 331.2.1.1 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV 0.60 47.0 4.61e-01 100.0% 79.7%
5027827 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.60 46.0 4.41e-01 100.0% 72.9%
3980760 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.59 46.0 3.57e-01 84.9% 38.2%
5037866 304.20.1.4 a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › CAA_C 0.59 51.0 3.84e-01 100.0% 56.8%
4995124 882.1.1.4 a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding 0.59 52.0 4.23e-01 100.0% 63.6%
3962561 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.59 48.0 3.95e-01 100.0% 47.9%
3306490 304.39.1.0 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.59 50.0 4.50e-01 100.0% 66.4%
4183868 878.1.1.1 a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 0.59 43.0 4.26e-01 87.7% 74.7%
4025874 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.58 49.0 4.45e-01 100.0% 67.6%
4946247 304.57.1.0 a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like 0.58 49.0 4.50e-01 100.0% 70.5%
5162 304.4.1.4 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM 0.58 48.0 4.29e-01 100.0% 63.9%
5003583 882.1.1.4 a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding 0.58 50.0 4.03e-01 100.0% 96.7%
4457840 812.1.1.1 a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain › MinE 0.58 45.0 4.31e-01 87.7% 74.1%
4161001 305.1.1.0 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase 0.58 46.0 4.30e-01 100.0% 69.5%
3736202 304.61.1.2 a+b two layers › Alpha-beta plaits › Aldoxime dehydratase › Aldoxime dehydratase › Monooxy_af470-like 0.58 50.0 3.58e-01 100.0% 31.5%
4047925 304.4.1.4 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM 0.58 49.0 4.35e-01 100.0% 67.0%
4991974 882.1.1.4 a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding 0.58 51.0 4.14e-01 100.0% 60.7%
4605207 304.57.1.0 a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like 0.57 49.0 4.31e-01 100.0% 64.3%
4567496 331.2.1.1 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV 0.57 44.0 4.43e-01 100.0% 84.0%
4938292 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.57 45.0 4.23e-01 100.0% 68.4%
4986703 882.1.1.4 a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding 0.57 49.0 4.04e-01 98.6% 95.7%
3731471 304.4.1.4 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM 0.57 47.0 4.17e-01 100.0% 62.7%
3689135 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.57 39.0 3.75e-01 100.0% 60.0%
3519213 109.4.1.2122 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Zw10_middle, ZW10_C2 0.57 45.0 2.64e-01 86.3% 11.6%
3604174 304.8.1.96 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PF26798 0.57 42.0 4.10e-01 100.0% 70.6%
2388573 309.1.1.0 a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase 0.57 48.0 3.70e-01 100.0% 40.0%
3729156 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.56 45.0 4.16e-01 100.0% 67.0%
5070035 882.1.1.4 a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding 0.56 49.0 3.97e-01 100.0% 67.6%
3320980 309.1.1.4 a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_C 0.56 49.0 3.54e-01 100.0% 41.4%
5192 304.4.1.28 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › DUF6974 0.56 47.0 4.26e-01 100.0% 67.0%
4443601 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.56 42.0 4.08e-01 100.0% 70.6%
4969027 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.56 44.0 4.06e-01 100.0% 65.0%
3730752 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.56 47.0 4.28e-01 100.0% 67.6%
2629103 304.4.1.8 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › rhaM 0.56 44.0 4.00e-01 100.0% 62.0%
4985406 878.1.1.1 a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 0.56 43.0 4.22e-01 90.4% 79.7%
3360196 304.4.1.14 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Dabb 0.56 46.0 4.05e-01 100.0% 60.9%
3197890 304.61.1.2 a+b two layers › Alpha-beta plaits › Aldoxime dehydratase › Aldoxime dehydratase › Monooxy_af470-like 0.56 48.0 3.46e-01 100.0% 35.1%
4405647 304.61.1.2 a+b two layers › Alpha-beta plaits › Aldoxime dehydratase › Aldoxime dehydratase › Monooxy_af470-like 0.55 49.0 3.57e-01 100.0% 39.0%
4995882 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.55 41.0 4.13e-01 100.0% 81.3%
1146572 304.152.1.1 a+b two layers › Alpha-beta plaits › E4-ORF3 › E4-ORF3 › Adeno_E4_ORF3 0.55 48.0 4.16e-01 100.0% 63.8%
3895213 11.1.1.96 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.55 48.0 4.28e-01 98.6% 76.2%
4006695 309.1.1.4 a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_C 0.55 47.0 3.58e-01 100.0% 40.0%
3726378 304.4.1.4 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM 0.54 45.0 4.14e-01 100.0% 68.6%
5058262 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.54 44.0 4.01e-01 100.0% 64.2%
3306021 873.1.1.10 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › D27-like_C 0.54 41.0 3.16e-01 94.5% 34.1%
4959305 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.54 45.0 3.85e-01 100.0% 56.0%
5051958 2003.1.5.79 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23 0.54 46.0 3.59e-01 100.0% 56.6%
3402965 304.4.1.15 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › NIPSNAP 0.54 44.0 4.09e-01 100.0% 71.0%
4484898 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.54 44.0 4.14e-01 100.0% 75.6%
5052199 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.53 46.0 3.40e-01 100.0% 48.3%
3855673 11.1.1.589 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NUP210_Ig 0.53 45.0 3.76e-01 100.0% 85.9%
3959243 328.8.1.0 a+b two layers › IF3-like › Schlafen 8 › Schlafen 8 0.52 45.0 3.46e-01 100.0% 48.6%
3814789 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.52 38.0 4.02e-01 100.0% 92.3%
4945661 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.52 39.0 2.80e-01 83.6% 40.0%
3697663 304.4.1.8 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › rhaM 0.52 41.0 3.62e-01 100.0% 56.7%
3689787 318.1.1.0 a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 0.51 42.0 4.06e-01 100.0% 78.6%
3891278 11.1.1.589 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NUP210_Ig 0.51 42.0 3.68e-01 100.0% 70.0%
3777561 11.1.1.589 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NUP210_Ig 0.51 41.0 3.58e-01 100.0% 72.6%
3637017 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.51 41.0 2.84e-01 90.4% 43.1%
3859511 11.1.1.363 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_3 0.51 43.0 3.59e-01 98.6% 56.3%
4958412 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.50 44.0 3.71e-01 100.0% 77.6%
3953369 304.4.1.2 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › MIase 0.50 41.0 3.65e-01 100.0% 62.4%