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BML_08182015_6_5m_scaffold_1_prodigal-single.1__X__X__00376
Bact-VirBML_08182015_6_5m_scaffold_1_prodigal-single.1__X__X__00376
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-81_157-274
Domain cluster:
rep: SR-VP_4-6_scaffold_141_2630357_prodigal-single.1__X__X__00142__D170-386
CATH (70)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4rshA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.77 | 65.0 | 6.95e-01 | 96.0% | 99.4% |
| 1ivnA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.76 | 65.0 | 6.87e-01 | 98.5% | 99.4% |
| 2b99C00 | 3.40.50.960 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase | 0.74 | 49.0 | 5.51e-01 | 99.0% | 86.2% |
| 4rw0A00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.73 | 65.0 | 6.72e-01 | 98.0% | 98.9% |
| 6hfzA01 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.73 | 65.0 | 6.35e-01 | 99.0% | 86.0% |
| 4xvhA02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.72 | 68.0 | 6.51e-01 | 99.0% | 99.1% |
| 2wabA02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.72 | 68.0 | 6.60e-01 | 99.0% | 98.6% |
| 1z8hA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.71 | 68.0 | 6.82e-01 | 100.0% | 98.0% |
| 2w9xA02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.71 | 68.0 | 6.48e-01 | 100.0% | 97.3% |
| 2waaA02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.71 | 67.0 | 6.51e-01 | 99.0% | 97.6% |
| 3bzwF00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.69 | 66.0 | 6.10e-01 | 100.0% | 97.1% |
| 4dgfA00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.69 | 43.0 | 5.31e-01 | 91.9% | 100.0% |
| 4s1pA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.69 | 60.0 | 6.28e-01 | 96.5% | 98.9% |
| 8gr2A01 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.68 | 62.0 | 6.29e-01 | 94.4% | 100.0% |
| 2o14A02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.68 | 63.0 | 6.27e-01 | 99.0% | 99.5% |
| 7tjbA01 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.67 | 63.0 | 6.20e-01 | 98.5% | 97.1% |
| 3lloA00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.65 | 43.0 | 5.12e-01 | 96.0% | 98.5% |
| 5awhA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.64 | 46.0 | 4.90e-01 | 99.5% | 81.6% |
| 3zokA01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 44.0 | 4.64e-01 | 87.4% | 80.5% |
| 5vegB00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.62 | 45.0 | 5.11e-01 | 99.0% | 99.3% |
| 3gdwB00 | 3.40.50.510 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component | 0.62 | 37.0 | 4.33e-01 | 99.0% | 83.3% |
| 5dn8A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 49.0 | 5.33e-01 | 100.0% | 100.0% |
| 1dpgA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 44.0 | 4.62e-01 | 71.7% | 97.7% |
| 3qkwB01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.61 | 50.0 | 5.36e-01 | 98.5% | 98.9% |
| 4i0wB01 | 3.40.50.200 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain | 0.61 | 57.0 | 4.76e-01 | 100.0% | 75.8% |
| 1ujnA01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.61 | 41.0 | 4.49e-01 | 86.9% | 82.6% |
| 2ynmC02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.60 | 38.0 | 4.45e-01 | 99.5% | 89.2% |
| 6c5cA01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 43.0 | 4.55e-01 | 87.4% | 79.7% |
| 4c6rA00 | 3.40.50.10140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain | 0.60 | 47.0 | 5.14e-01 | 98.5% | 99.4% |
| 7wkqB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 56.0 | 5.56e-01 | 99.0% | 96.6% |
| 7u7hA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.59 | 43.0 | 4.20e-01 | 94.4% | 66.8% |
| 3i1iB01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.59 | 53.0 | 4.35e-01 | 99.5% | 90.0% |
| 3n0xA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 41.0 | 4.52e-01 | 91.9% | 87.2% |
| 1ozhB03 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.58 | 43.0 | 4.32e-01 | 98.0% | 75.5% |
| 3hlkB02 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.58 | 53.0 | 4.78e-01 | 99.5% | 90.2% |
| 2klnA00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.58 | 37.0 | 4.46e-01 | 94.9% | 99.2% |
| 3iprA00 | 3.40.50.510 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component | 0.58 | 36.0 | 4.15e-01 | 100.0% | 86.1% |
| 2qu8A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 48.0 | 4.88e-01 | 100.0% | 90.7% |
| 4f3hA00 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.58 | 46.0 | 4.28e-01 | 83.8% | 85.4% |
| 3e0lA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.57 | 51.0 | 4.40e-01 | 96.5% | 97.7% |
| 1bxbA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.57 | 49.0 | 3.93e-01 | 91.4% | 70.0% |
| 3lgdA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.55 | 49.0 | 3.79e-01 | 99.0% | 78.8% |
| 4j1qA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 50.0 | 3.92e-01 | 97.5% | 53.7% |
| 4kfuA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 43.0 | 4.27e-01 | 95.5% | 77.6% |
| 6xl1A01 | 3.40.50.10770 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein VC1899 like domain (Restriction endonuclease-like) | 0.55 | 35.0 | 3.90e-01 | 91.9% | 80.0% |
| 3vu9B00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 39.0 | 4.01e-01 | 71.7% | 83.8% |
| 2m8cA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.55 | 32.0 | 3.74e-01 | 96.5% | 81.0% |
| 5ck3F00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 40.0 | 4.53e-01 | 96.5% | 100.0% |
| 4f8xA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.55 | 44.0 | 3.77e-01 | 86.9% | 90.1% |
| 3rdkB00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.54 | 44.0 | 3.74e-01 | 85.9% | 89.8% |
| 4lj3A00 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.54 | 46.0 | 4.25e-01 | 91.4% | 84.0% |
| 1rliD00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.54 | 43.0 | 4.66e-01 | 98.5% | 100.0% |
| 3zidB00 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.54 | 49.0 | 4.08e-01 | 99.5% | 57.0% |
| 4zxoA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.54 | 48.0 | 4.07e-01 | 100.0% | 98.0% |
| 1ihuA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 44.0 | 3.92e-01 | 88.9% | 95.2% |
| 3zs7A00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.53 | 47.0 | 4.27e-01 | 98.0% | 83.0% |
| 1nmnA00 | 3.30.420.140 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain | 0.53 | 33.0 | 3.99e-01 | 94.9% | 100.0% |
| 3no3A00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.53 | 45.0 | 4.30e-01 | 92.4% | 89.9% |
| 2qezE03 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 46.0 | 4.10e-01 | 97.5% | 89.8% |
| 1gteB05 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 46.0 | 4.01e-01 | 96.5% | 86.9% |
| 1gvfB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 46.0 | 4.16e-01 | 96.5% | 100.0% |
| 5l3sB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 45.0 | 4.48e-01 | 93.9% | 88.6% |
| 8b3yA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.52 | 44.0 | 3.79e-01 | 90.9% | 91.1% |
| 3cuxA01 | 3.20.20.360 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Malate synthase, domain 3 | 0.52 | 45.0 | 3.71e-01 | 96.0% | 75.8% |
| 2olsA04 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.51 | 45.0 | 3.88e-01 | 96.0% | 92.3% |
| 6ia6A01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 44.0 | 4.04e-01 | 95.5% | 99.6% |
| 3qvqA00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.50 | 44.0 | 4.05e-01 | 93.4% | 90.0% |
| 3h7mA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.50 | 33.0 | 3.83e-01 | 87.9% | 95.5% |
| 1d4oA00 | 3.40.50.1220 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain | 0.50 | 38.0 | 4.04e-01 | 94.4% | 88.1% |
| 2oqhA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.50 | 41.0 | 3.83e-01 | 86.9% | 87.4% |
ECOD (62)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1411712 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.77 | 65.0 | 6.95e-01 | 96.0% | 99.4% |
| 3983672 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.76 | 66.0 | 6.84e-01 | 100.0% | 96.3% |
| 4624410 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.75 | 66.0 | 6.65e-01 | 98.0% | 92.3% |
| 3834536 | 2007.9.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR | 0.74 | 53.0 | 6.06e-01 | 96.5% | 98.6% |
| 1492214 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.73 | 65.0 | 6.72e-01 | 98.0% | 98.9% |
| 3405177 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.73 | 46.0 | 5.46e-01 | 96.5% | 91.9% |
| 10058 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.73 | 68.0 | 6.84e-01 | 98.0% | 98.0% |
| 3285907 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.72 | 69.0 | 6.20e-01 | 100.0% | 97.3% |
| 4975785 | 2007.1.13.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Lumazine synthase › DMRL_synthase | 0.72 | 48.0 | 5.41e-01 | 100.0% | 85.8% |
| 3284969 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.72 | 67.0 | 6.23e-01 | 97.5% | 96.2% |
| 3956588 | 2007.5.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase | 0.72 | 68.0 | 6.34e-01 | 98.5% | 98.7% |
| 3408059 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.71 | 44.0 | 5.25e-01 | 96.5% | 90.3% |
| 10062 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.71 | 67.0 | 6.16e-01 | 100.0% | 96.8% |
| 4870260 | 2007.5.1.5 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › DUF459 | 0.69 | 64.0 | 6.21e-01 | 97.0% | 93.0% |
| 3002691 | 2007.5.1.5 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › DUF459 | 0.67 | 63.0 | 6.07e-01 | 100.0% | 92.3% |
| 3962945 | 2007.5.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase | 0.66 | 47.0 | 5.40e-01 | 86.9% | 95.3% |
| 3260826 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.66 | 50.0 | 5.16e-01 | 97.0% | 82.1% |
| 4456206 | 2007.1.7.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Rossmann-like domain in dehydroquinate synthase-like enzymes › DHQ_synthase | 0.63 | 42.0 | 4.59e-01 | 82.8% | 81.2% |
| 3263185 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.62 | 48.0 | 5.09e-01 | 99.5% | 91.8% |
| 4130854 | 2007.1.7.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Rossmann-like domain in dehydroquinate synthase-like enzymes › DHQ_synthase | 0.62 | 43.0 | 4.53e-01 | 87.9% | 76.7% |
| 5083625 | 7575.1.1.1 ↗ | a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › Peptidase_C14 | 0.62 | 57.0 | 5.13e-01 | 100.0% | 99.6% |
| 4246539 | 2007.1.7.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Rossmann-like domain in dehydroquinate synthase-like enzymes › DHQ_synthase | 0.62 | 42.0 | 4.43e-01 | 80.8% | 76.6% |
| 3410655 | 2004.1.1.222 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RhoGAP_pG1_pG2 | 0.62 | 47.0 | 5.13e-01 | 100.0% | 96.9% |
| 4011914 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.61 | 57.0 | 5.01e-01 | 100.0% | 92.6% |
| None | — | 0.61 | 42.0 | 4.54e-01 | 82.3% | 81.8% | |
| 4679174 | 2007.1.7.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Rossmann-like domain in dehydroquinate synthase-like enzymes › DHQ_synthase | 0.61 | 43.0 | 4.61e-01 | 87.4% | 82.4% |
| 3276014 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.61 | 49.0 | 4.50e-01 | 97.0% | 64.7% |
| 3926452 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.61 | 47.0 | 4.71e-01 | 97.0% | 78.5% |
| None | — | 0.61 | 42.0 | 4.48e-01 | 82.8% | 80.0% | |
| 3852148 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.61 | 52.0 | 5.19e-01 | 98.5% | 86.8% |
| 3598624 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.61 | 49.0 | 5.07e-01 | 100.0% | 90.3% |
| 4014799 | 2007.1.7.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Rossmann-like domain in dehydroquinate synthase-like enzymes | 0.61 | 42.0 | 4.54e-01 | 80.8% | 81.8% |
| 3260634 | 129.1.1.0 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like | 0.60 | 52.0 | 5.11e-01 | 97.5% | 85.2% |
| 3595123 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.60 | 48.0 | 5.09e-01 | 100.0% | 94.8% |
| None | — | 0.59 | 39.0 | 4.36e-01 | 86.4% | 86.0% | |
| 3812691 | 2007.9.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR | 0.58 | 44.0 | 4.87e-01 | 97.0% | 98.1% |
| 3721842 | 2007.17.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › N-terminal domain in a putative metallopeptidase YP_676511.1 › N-terminal domain in a putative metallopeptidase YP_676511.1 › DUF1485 | 0.58 | 51.0 | 5.26e-01 | 100.0% | 100.0% |
| 3812589 | 2007.9.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR | 0.57 | 47.0 | 4.92e-01 | 99.5% | 97.2% |
| 4947380 | 2004.1.1.94 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP_bind_1 | 0.56 | 51.0 | 4.79e-01 | 98.0% | 99.2% |
| 3700326 | 2006.1.3.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim | 0.56 | 40.0 | 4.56e-01 | 93.9% | 97.9% |
| 4173724 | 2004.1.1.465 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MipZ, AAA_31 | 0.56 | 51.0 | 4.62e-01 | 98.5% | 100.0% |
| 5070528 | 2004.1.1.164 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Roc | 0.56 | 47.0 | 4.86e-01 | 100.0% | 96.8% |
| 4029780 | 2003.1.6.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin | 0.55 | 49.0 | 4.72e-01 | 96.5% | 99.6% |
| 4542302 | 2002.5.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL | 0.55 | 44.0 | 4.02e-01 | 84.3% | 80.0% |
| 5010988 | 2004.1.1.67 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CbiA | 0.55 | 49.0 | 4.52e-01 | 99.0% | 98.1% |
| 5011726 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.54 | 36.0 | 3.18e-01 | 71.2% | 44.9% |
| 3582142 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.54 | 43.0 | 4.50e-01 | 99.5% | 90.3% |
| 3960511 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.54 | 48.0 | 4.83e-01 | 94.9% | 100.0% |
| 4486112 | 7592.1.1.3 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › DUF6293_N | 0.54 | 34.0 | 4.12e-01 | 97.5% | 98.4% |
| 4007436 | 2002.5.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL | 0.54 | 45.0 | 4.20e-01 | 90.9% | 84.3% |
| 5025903 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 37.0 | 4.02e-01 | 79.3% | 84.2% |
| 3282757 | 2002.1.1.143 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Met_asp_mut_E | 0.53 | 46.0 | 3.69e-01 | 93.9% | 71.7% |
| 4984967 | 7592.1.1.3 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › DUF6293_N | 0.53 | 36.0 | 4.21e-01 | 97.5% | 97.1% |
| 5079093 | 2004.1.1.196 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 | 0.53 | 43.0 | 3.99e-01 | 85.4% | 93.7% |
| 3712249 | 3016.1.1.1 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 | 0.53 | 45.0 | 3.42e-01 | 90.4% | 56.3% |
| 3978017 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.53 | 49.0 | 3.67e-01 | 100.0% | 58.6% |
| 3977807 | 2002.5.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL | 0.52 | 41.0 | 4.28e-01 | 96.5% | 89.6% |
| 5017866 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.52 | 45.0 | 3.58e-01 | 91.4% | 90.0% |
| 3288683 | 2002.1.1.79 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF72 | 0.52 | 43.0 | 3.98e-01 | 91.4% | 96.6% |
| 4337374 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.52 | 36.0 | 3.43e-01 | 87.9% | 59.6% |
| 4582525 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.50 | 35.0 | 3.36e-01 | 82.3% | 60.0% |
| 3959775 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.50 | 40.0 | 3.93e-01 | 82.8% | 91.0% |
D2
high
residues 89-152
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4pkwA02 | 1.10.2030.10 | Mainly Alpha › Orthogonal Bundle › Anthrax toxin lethal factor, domain 3, chain A › Anthrax toxin lethal factor, domain 3, chain A | 0.62 | 41.0 | 4.17e-01 | 71.9% | 69.8% |
| 3d6jA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.61 | 42.0 | 4.21e-01 | 71.9% | 94.0% |
| 2pohA02 | 6.10.140.940 | Special › Helix non-globular › Helix Hairpins › | 0.58 | 37.0 | 3.53e-01 | 78.1% | 54.5% |
| 1oyjB02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.56 | 42.0 | 3.45e-01 | 85.9% | 45.9% |
| 3kr9A02 | 1.10.287.1890 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 41.0 | 4.22e-01 | 82.8% | 98.4% |
| 4dmvA01 | 1.20.58.1190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 38.0 | 3.46e-01 | 75.0% | 64.7% |
| 4mtxD00 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.52 | 37.0 | 3.33e-01 | 82.8% | 51.6% |
| 2jhnA03 | 1.10.1670.10 | Mainly Alpha › Orthogonal Bundle › Endonuclease Iii, domain 2 › Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) | 0.51 | 33.0 | 3.44e-01 | 71.9% | 71.7% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3637782 | 101.1.2.160 ↗ | alpha arrays › HTH › HTH › winged helix domain › BLACT_WH | 0.61 | 45.0 | 4.19e-01 | 81.2% | 96.5% |
| 4303160 | 2004.1.1.226 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADDB_N | 0.59 | 50.0 | 3.33e-01 | 100.0% | 40.3% |
| 3932846 | 603.1.1.1 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin | 0.56 | 42.0 | 3.12e-01 | 87.5% | 74.1% |
| 3213281 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.53 | 41.0 | 2.67e-01 | 87.5% | 19.3% |
| 3301750 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.53 | 39.0 | 3.34e-01 | 78.1% | 66.7% |
| 3604254 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.52 | 45.0 | 2.86e-01 | 96.9% | 45.2% |
| 3602853 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.51 | 40.0 | 3.22e-01 | 87.5% | 86.9% |