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BML_08182015_6_5m_scaffold_7_prodigal-single.1__X__X__00200
Bact-VirBML_08182015_6_5m_scaffold_7_prodigal-single.1__X__X__00200
Identity
- Kingdom:
- phage
Quality
94.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-69
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4llgM00 | 3.10.20.510 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNA polymerase inhibitor | 0.73 | 50.0 | 5.63e-01 | 79.4% | 96.0% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.68 | 56.0 | 5.45e-01 | 91.2% | 86.8% |
| 7dm9A01 | 3.40.1550.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chemotaxis protein chec › CheC-like | 0.61 | 54.0 | 4.08e-01 | 100.0% | 65.7% |
| 4fgoA00 | 3.10.620.30 | Alpha Beta › Roll › C8orf32 fold › | 0.59 | 44.0 | 3.27e-01 | 80.9% | 31.5% |
| 3hm4A00 | 3.40.1550.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chemotaxis protein chec › CheC-like | 0.58 | 50.0 | 3.95e-01 | 100.0% | 71.2% |
| 4gc8B00 | 3.40.1550.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chemotaxis protein chec › CheC-like | 0.58 | 51.0 | 3.81e-01 | 100.0% | 62.1% |
| 2hp7A00 | 3.40.1550.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chemotaxis protein chec › CheC-like | 0.57 | 50.0 | 3.74e-01 | 100.0% | 63.1% |
| 1konA02 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.55 | 48.0 | 4.46e-01 | 100.0% | 84.4% |
| 2avwD01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.55 | 41.0 | 3.28e-01 | 80.9% | 92.9% |
| 1j6rA00 | 3.40.109.40 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › | 0.55 | 37.0 | 2.73e-01 | 70.6% | 59.4% |
| 1vq8P01 | 1.10.1650.10 | Mainly Alpha › Orthogonal Bundle › 50s Ribosomal Protein L19e, Chain O, domain 1 › | 0.54 | 35.0 | 3.82e-01 | 100.0% | 81.8% |
| 4g1lA01 | 2.70.20.50 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Viral matrix protein, N-terminal domain | 0.54 | 42.0 | 3.30e-01 | 88.2% | 71.2% |
| 1mw7A02 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.54 | 47.0 | 4.35e-01 | 100.0% | 96.6% |
| 2b5iB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 39.0 | 3.56e-01 | 83.8% | 57.4% |
| 3h2dB00 | 3.40.1550.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chemotaxis protein chec › CheC-like | 0.52 | 43.0 | 3.49e-01 | 100.0% | 71.4% |
| 4mi7A00 | 3.90.70.170 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.52 | 40.0 | 3.36e-01 | 85.3% | 54.8% |
| 1tuwA00 | 3.30.70.1090 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel. | 0.52 | 39.0 | 3.49e-01 | 83.8% | 97.2% |
| 2jmkA00 | 3.30.420.600 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Thermoplasma acidophilum protein TA0956 | 0.51 | 37.0 | 3.22e-01 | 77.9% | 72.7% |
| 4gzuA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 38.0 | 3.01e-01 | 80.9% | 80.7% |
| 8p2aA01 | 3.90.1010.20 | Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › | 0.51 | 35.0 | 3.32e-01 | 73.5% | 67.8% |
| 3madA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 36.0 | 2.94e-01 | 77.9% | 38.9% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995671 | 3115.1.1.12 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › PF30567 | 0.77 | 51.0 | 5.83e-01 | 82.4% | 94.0% |
| 5050255 | 866.1.1.2 ↗ | a+b duplicates or obligate multimers › CheC-like › CheC-like › CheC-like › CheC | 0.60 | 53.0 | 3.76e-01 | 100.0% | 64.3% |
| 4016088 | 821.1.1.3 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172 | 0.60 | 52.0 | 4.58e-01 | 100.0% | 80.0% |
| 3387476 | 866.1.1.3 ↗ | a+b duplicates or obligate multimers › CheC-like › CheC-like › CheC-like › CheX | 0.59 | 50.0 | 4.05e-01 | 100.0% | 77.9% |
| 4964674 | 866.1.1.3 ↗ | a+b duplicates or obligate multimers › CheC-like › CheC-like › CheC-like › CheX | 0.58 | 51.0 | 3.68e-01 | 100.0% | 63.5% |
| 4677322 | 306.10.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › H1 domain of KCTD12 › H1 domain of KCTD12 › KCTD1-15_CTD | 0.57 | 34.0 | 2.83e-01 | 79.4% | 33.3% |
| 3200064 | 219.1.1.93 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF6540 | 0.54 | 47.0 | 3.92e-01 | 100.0% | 71.2% |
| 4990154 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.54 | 40.0 | 3.49e-01 | 80.9% | 99.1% |
| 3510929 | 1.1.5.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin | 0.54 | 40.0 | 2.75e-01 | 80.9% | 27.7% |
| 3605297 | 306.10.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › H1 domain of KCTD12 › H1 domain of KCTD12 | 0.53 | 37.0 | 3.14e-01 | 75.0% | 86.4% |
| 4971197 | 298.2.1.1 ↗ | a+b two layers › FwdE/GAPDH domain-like › FwdE-like › FwdE-like › FmdE | 0.53 | 36.0 | 3.01e-01 | 88.2% | 37.0% |
| 3416551 | 4007.1.1.0 ↗ | a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins | 0.53 | 47.0 | 4.47e-01 | 100.0% | 95.0% |
| 5051952 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.52 | 38.0 | 3.33e-01 | 79.4% | 98.2% |
| 3718978 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.52 | 42.0 | 3.47e-01 | 92.6% | 97.0% |
| 5015352 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 38.0 | 3.61e-01 | 82.4% | 66.3% |
| 150856 | 219.1.1.57 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CIF | 0.51 | 35.0 | 2.43e-01 | 70.6% | 64.0% |
| 3274736 | 2.2.1.14 ↗ | beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins › BP74_N | 0.51 | 37.0 | 3.18e-01 | 79.4% | 99.1% |
| 3276499 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.51 | 35.0 | 3.09e-01 | 73.5% | 61.9% |
| 5064795 | 264.2.1.1 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac | 0.50 | 39.0 | 3.35e-01 | 88.2% | 94.2% |