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BML_08182015_8_5m_scaffold_0_prodigal-single.1__X__X__00001
Bact-VirBML_08182015_8_5m_scaffold_0_prodigal-single.1__X__X__00001
Identity
- Kingdom:
- phage
Quality
78.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 340-512
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2v31A01 | 2.40.30.180 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Ubiquitin-activating enzyme E1, FCCH domain | 0.74 | 40.0 | 5.24e-01 | 93.1% | 93.8% |
| 6tdyD01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.69 | 31.0 | 4.50e-01 | 100.0% | 94.7% |
| 1fx0B01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.66 | 32.0 | 4.57e-01 | 86.7% | 100.0% |
| 4wqmA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.63 | 35.0 | 4.59e-01 | 88.4% | 96.9% |
| 3a35A01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.63 | 30.0 | 3.93e-01 | 100.0% | 82.6% |
| 2fvgA02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.62 | 29.0 | 4.18e-01 | 100.0% | 98.7% |
| 4g6iC02 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.61 | 29.0 | 3.80e-01 | 100.0% | 81.9% |
| 4aq1A01 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 27.0 | 3.42e-01 | 99.4% | 73.4% |
| 4k4kA01 | 2.60.40.2620 | Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrillin-like | 0.53 | 31.0 | 3.55e-01 | 82.1% | 75.6% |
| 1mfnA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 28.0 | 3.48e-01 | 87.3% | 89.2% |
| 6brbD00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 24.0 | 3.05e-01 | 98.3% | 77.0% |
| 1xzwA01 | 2.60.40.380 | Mainly Beta › Sandwich › Immunoglobulin-like › Purple acid phosphatase-like, N-terminal | 0.51 | 26.0 | 3.31e-01 | 100.0% | 82.7% |
| 1vq8B02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.51 | 35.0 | 3.92e-01 | 87.3% | 88.3% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5078307 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.78 | 34.0 | 5.26e-01 | 99.4% | 97.3% |
| 5078309 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.71 | 33.0 | 4.80e-01 | 100.0% | 96.2% |
| 3272448 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.71 | 34.0 | 4.57e-01 | 100.0% | 84.2% |
| 4028468 | 1.1.7.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › E1_FCCH | 0.69 | 41.0 | 5.20e-01 | 93.1% | 97.1% |
| 4596341 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.66 | 31.0 | 4.03e-01 | 100.0% | 78.9% |
| 3252937 | 1.1.7.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › E1_FCCH | 0.65 | 40.0 | 5.07e-01 | 87.9% | 100.0% |
| 4085735 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.64 | 30.0 | 4.08e-01 | 100.0% | 84.4% |
| 4210485 | 4.1.1.303 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus | 0.56 | 23.0 | 3.60e-01 | 76.9% | 98.5% |
| 3288675 | 1.1.7.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Lum_binding | 0.55 | 34.0 | 4.21e-01 | 87.3% | 98.2% |
| 3789503 | 1.1.7.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 | 0.54 | 33.0 | 4.15e-01 | 85.5% | 100.0% |
| 3273650 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 25.0 | 3.19e-01 | 99.4% | 75.8% |
| 4616814 | 1.1.7.79 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Beta-barrel_RND | 0.53 | 30.0 | 3.79e-01 | 100.0% | 95.0% |
| 5054413 | 5090.1.1.0 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains | 0.52 | 24.0 | 3.03e-01 | 87.3% | 70.9% |
D2
high
residues 1066-1187
Domain cluster:
rep: SRR1747055_scaffold_2_prodigal-single.1__X__X__00342__D202-325
D3
medium
residues 22-152_329-335
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3zpeA00 | 2.60.90.50 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › | 0.61 | 40.0 | 4.07e-01 | 94.9% | 65.2% |
| 2qi2A01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.61 | 38.0 | 4.27e-01 | 95.7% | 80.8% |
| 2xnjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.59 | 42.0 | 4.76e-01 | 97.8% | 99.0% |
| 7uwjC02 | 2.60.40.2150 | Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 2 | 0.54 | 33.0 | 3.76e-01 | 71.0% | 83.5% |
| 2dpyA00 | 3.40.50.12240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 46.0 | 3.29e-01 | 100.0% | 65.2% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1790393 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.74 | 43.0 | 5.40e-01 | 97.8% | 96.3% |
| 4890345 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.71 | 42.0 | 5.17e-01 | 83.3% | 94.1% |
| 4299010 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 45.0 | 5.24e-01 | 71.0% | 94.7% |
| 3389361 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.67 | 43.0 | 5.07e-01 | 98.6% | 94.7% |
| 4864011 | 1.1.7.41 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom | 0.65 | 47.0 | 5.30e-01 | 76.8% | 98.1% |
| 4069543 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.61 | 32.0 | 4.16e-01 | 97.1% | 92.0% |
| 3387846 | 1.1.7.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase | 0.55 | 44.0 | 4.74e-01 | 98.6% | 96.7% |
| 3250648 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.55 | 35.0 | 3.94e-01 | 70.3% | 86.0% |
| 5067952 | 11.1.1.288 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_13 | 0.51 | 30.0 | 3.48e-01 | 70.3% | 84.2% |
D4
medium
residues 157-171_257-326
Domain cluster:
rep: ALT_07252016_14_scaffold_0_prodigal-single.1__X__X__00375__D233-318
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ztnA02 | 2.40.30.190 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.75 | 67.0 | 5.66e-01 | 100.0% | 83.7% |
| 2v31A01 | 2.40.30.180 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Ubiquitin-activating enzyme E1, FCCH domain | 0.71 | 59.0 | 5.71e-01 | 100.0% | 80.4% |
| 1v0fB03 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.70 | 61.0 | 6.13e-01 | 100.0% | 95.3% |
| 1fx0B01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.61 | 50.0 | 5.22e-01 | 98.8% | 98.7% |
| 1ib8A02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.58 | 42.0 | 4.58e-01 | 98.8% | 98.5% |
| 2derA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.56 | 42.0 | 4.23e-01 | 90.6% | 78.2% |
| 2nv4A00 | 2.40.30.70 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like | 0.55 | 48.0 | 4.23e-01 | 100.0% | 90.9% |
| 4rd7A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 41.0 | 3.73e-01 | 100.0% | 60.5% |
| 2m0yA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 38.0 | 4.05e-01 | 83.5% | 87.8% |
| 1vwxY00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 41.0 | 3.48e-01 | 81.2% | 59.0% |
| 4qpwA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 47.0 | 3.98e-01 | 100.0% | 97.9% |
| 8eq1A01 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.52 | 46.0 | 4.55e-01 | 96.5% | 100.0% |
| 2bseA00 | 2.60.40.1830 | Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain | 0.52 | 39.0 | 3.75e-01 | 100.0% | 68.2% |
| 8h68A01 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.51 | 44.0 | 3.37e-01 | 100.0% | 51.4% |
| 2xdhA00 | 2.60.40.680 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 44.0 | 3.82e-01 | 98.8% | 73.9% |
| 2vveA01 | 2.60.120.770 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 43.0 | 4.18e-01 | 100.0% | 86.0% |
| 4kktA01 | 2.40.420.20 | Mainly Beta › Beta Barrel › conserved putative lor/sdh protein from methanococcus maripaludis s2 fold › | 0.51 | 40.0 | 3.90e-01 | 100.0% | 78.1% |
| 4u3vA00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.51 | 39.0 | 2.89e-01 | 84.7% | 90.5% |
| 3q48A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 38.0 | 3.89e-01 | 100.0% | 85.5% |
| 2v4dE01 | 2.40.420.20 | Mainly Beta › Beta Barrel › conserved putative lor/sdh protein from methanococcus maripaludis s2 fold › | 0.50 | 40.0 | 4.02e-01 | 100.0% | 89.3% |
| 5z06B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 36.0 | 3.59e-01 | 98.8% | 72.8% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1030933 | 1.1.7.29 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › End_beta_barrel | 0.69 | 61.0 | 6.01e-01 | 100.0% | 91.0% |
| 3882695 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 42.0 | 4.81e-01 | 77.6% | 100.0% |
| 3882696 | 4.1.1.118 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_15 | 0.62 | 45.0 | 4.62e-01 | 100.0% | 81.2% |
| 4867073 | 2485.3.1.8 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › P22_CoatProtein | 0.61 | 55.0 | 5.03e-01 | 100.0% | 97.3% |
| 3635125 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.61 | 42.0 | 3.40e-01 | 71.8% | 79.3% |
| 3222210 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.58 | 44.0 | 4.71e-01 | 100.0% | 98.6% |
| 3608412 | 10.34.1.0 ↗ | beta sandwiches › jelly-roll › Protein CLP1 jelly-roll domain › Protein CLP1 jelly-roll domain | 0.58 | 43.0 | 4.39e-01 | 100.0% | 85.0% |
| 3601818 | 10.34.1.0 ↗ | beta sandwiches › jelly-roll › Protein CLP1 jelly-roll domain › Protein CLP1 jelly-roll domain | 0.57 | 42.0 | 4.31e-01 | 100.0% | 85.0% |
| 3991400 | 7526.1.1.0 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 | 0.56 | 47.0 | 3.38e-01 | 100.0% | 30.8% |
| 4124563 | 11.1.1.335 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgB_N | 0.54 | 39.0 | 3.80e-01 | 94.1% | 67.4% |
| 5063660 | 11.1.4.23 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg | 0.54 | 40.0 | 3.90e-01 | 92.9% | 71.6% |
| 1851176 | 5092.1.1.0 ↗ | beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins | 0.53 | 45.0 | 3.92e-01 | 100.0% | 60.3% |
| 3229302 | 10.33.1.0 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in minor capsid protein › Jelly-roll domain in minor capsid protein | 0.53 | 46.0 | 3.99e-01 | 100.0% | 95.7% |
| 1316605 | 10.32.1.50 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF5077 | 0.52 | 46.0 | 4.04e-01 | 100.0% | 90.8% |
| 3417865 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.52 | 45.0 | 4.18e-01 | 100.0% | 90.0% |
| 3944728 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.52 | 41.0 | 3.71e-01 | 100.0% | 61.7% |
| 4598590 | 4.1.1.303 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus | 0.51 | 36.0 | 3.87e-01 | 81.2% | 88.6% |
| 367299 | 70.2.1.0 ↗ | beta barrels › beta-clip › dUTPase-like › dUTPase-like | 0.51 | 43.0 | 3.94e-01 | 100.0% | 72.3% |
| 1714453 | 11.21.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein › TSP_Ig-like | 0.50 | 42.0 | 4.15e-01 | 100.0% | 89.4% |
D5
medium
residues 172-256
Domain cluster:
rep: ALT_07252016_14_scaffold_0_prodigal-single.1__X__X__00375__D233-318
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1v0fB03 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.71 | 61.0 | 6.15e-01 | 100.0% | 92.9% |
| 6tdyD01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.65 | 49.0 | 5.23e-01 | 100.0% | 92.0% |
| 3gqbA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.64 | 47.0 | 5.00e-01 | 100.0% | 91.5% |
| 1fx0B01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.62 | 50.0 | 5.14e-01 | 98.8% | 93.7% |
| 2m5sA00 | 2.40.30.240 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.61 | 56.0 | 4.90e-01 | 100.0% | 93.5% |
| 1qfjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.59 | 51.0 | 5.07e-01 | 100.0% | 91.2% |
| 1vwxf00 | 2.40.10.190 | Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 | 0.58 | 51.0 | 4.77e-01 | 100.0% | 87.2% |
| 2derA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.57 | 41.0 | 4.08e-01 | 78.8% | 73.6% |
| 4b3fX02 | 2.40.30.270 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.57 | 51.0 | 4.88e-01 | 100.0% | 88.8% |
| 2jngA00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 44.0 | 4.59e-01 | 98.8% | 92.2% |
| 3pe0A03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 37.0 | 4.16e-01 | 97.6% | 90.6% |
| 2p84A02 | 2.30.30.290 | Mainly Beta › Roll › SH3 type barrels. › YopX-like domains | 0.56 | 35.0 | 3.72e-01 | 98.8% | 72.6% |
| 4aq1A01 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 37.0 | 3.69e-01 | 100.0% | 71.3% |
| 1vw4M01 | 2.30.30.790 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 40.0 | 3.50e-01 | 85.9% | 67.4% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995824 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.74 | 57.0 | 6.07e-01 | 96.5% | 94.5% |
| 3332862 | 1.1.7.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › E1_FCCH | 0.71 | 60.0 | 5.81e-01 | 100.0% | 82.1% |
| 1030933 | 1.1.7.29 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › End_beta_barrel | 0.70 | 61.0 | 6.01e-01 | 100.0% | 88.8% |
| 3969204 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.68 | 52.0 | 5.47e-01 | 100.0% | 92.0% |
| 3594588 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.67 | 61.0 | 5.90e-01 | 100.0% | 95.8% |
| 3615570 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.67 | 61.0 | 5.47e-01 | 100.0% | 96.5% |
| 3596642 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.65 | 52.0 | 5.21e-01 | 100.0% | 85.9% |
| 4319764 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.63 | 48.0 | 4.44e-01 | 100.0% | 62.7% |
| 2161972 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 49.0 | 5.00e-01 | 100.0% | 88.0% |
| 3482225 | 4.1.1.300 ↗ | beta barrels › SH3 › SH3 › SH3 › KN17_SH3, SH3_KIN17_C | 0.62 | 40.0 | 3.53e-01 | 70.6% | 43.8% |
| 4888491 | 4.1.1.73 ↗ | beta barrels › SH3 › SH3 › SH3 › Cul7 | 0.61 | 40.0 | 4.71e-01 | 85.9% | 100.0% |
| 4984467 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.60 | 54.0 | 5.26e-01 | 100.0% | 90.5% |
| 3666563 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 41.0 | 4.57e-01 | 70.6% | 96.9% |
| 3323533 | 4.1.1.118 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_15 | 0.60 | 41.0 | 4.53e-01 | 70.6% | 95.4% |
| 3348231 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 41.0 | 4.42e-01 | 70.6% | 90.0% |
| 4943168 | 1.1.7.144 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › AAA_11 | 0.59 | 48.0 | 4.67e-01 | 100.0% | 78.9% |
| 4477675 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.59 | 53.0 | 4.93e-01 | 100.0% | 82.9% |
| 3535298 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.58 | 38.0 | 3.81e-01 | 100.0% | 63.3% |
| 3236689 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 37.0 | 4.34e-01 | 70.6% | 98.2% |
| 5041917 | 1.1.7.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ribosomal_L35Ae | 0.58 | 49.0 | 4.90e-01 | 100.0% | 92.2% |
| 4254437 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.55 | 40.0 | 4.06e-01 | 78.8% | 76.5% |
| 3759446 | 4.1.1.73 ↗ | beta barrels › SH3 › SH3 › SH3 › Cul7 | 0.55 | 43.0 | 4.25e-01 | 100.0% | 80.0% |
| 3480351 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 42.0 | 4.41e-01 | 98.8% | 94.7% |
| 4337472 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.51 | 41.0 | 3.99e-01 | 89.4% | 80.0% |
D6
medium
residues 521-623
Domain cluster:
representative
D7
medium
residues 624-685
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2aqjA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 43.0 | 2.66e-01 | 95.2% | 47.0% |
| 2xheA04 | 1.25.40.60 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.50 | 40.0 | 3.25e-01 | 87.1% | 90.7% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3977170 | 101.1.11.132 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › DUF1315 | 0.66 | 39.0 | 4.42e-01 | 74.2% | 80.0% |
| 4010438 | 616.1.1.40 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › DUF1315 | 0.65 | 38.0 | 4.04e-01 | 74.2% | 65.5% |
| 3788056 | 4336.1.1.0 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like | 0.56 | 38.0 | 3.10e-01 | 82.3% | 36.0% |