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BML_coassembly_scaffold_108_prodigal-single.1__X__X__00082

Bact-Vir

BML_coassembly_scaffold_108_prodigal-single.1__X__X__00082

Identity

Kingdom:
phage

Quality

87.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-91
PDB
Domain cluster: representative
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1w1hD00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.72 52.0 4.49e-01 100.0% 48.9%
4k17B01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.69 50.0 4.68e-01 100.0% 61.3%
3au4A04 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.68 49.0 4.83e-01 100.0% 71.0%
3pg7A02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 52.0 4.83e-01 100.0% 67.3%
2oqbA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 56.0 5.20e-01 100.0% 74.1%
2codA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 49.0 4.82e-01 100.0% 72.9%
2n54B00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.64 33.0 3.78e-01 100.0% 66.7%
1mkeA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 52.0 4.42e-01 100.0% 54.2%
3a8pB01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 55.0 5.02e-01 100.0% 72.4%
1egxA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 54.0 4.94e-01 100.0% 73.9%
3kyfA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 42.0 3.94e-01 73.0% 92.1%
1tj6A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 53.0 4.88e-01 100.0% 75.7%
3s4kA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.59 38.0 3.38e-01 100.0% 46.8%
1k3xA01 3.20.190.10 Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal 0.55 47.0 4.20e-01 93.3% 72.2%
2essA01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 35.0 2.96e-01 100.0% 40.6%
1jqpA01 2.40.128.80 Mainly Beta › Beta Barrel › Lipocalin › Cathepsin C, exclusion domain 0.53 46.0 4.34e-01 100.0% 94.6%
4kh8A01 2.40.128.540 Mainly Beta › Beta Barrel › Lipocalin › Domain of unknown function DUF4822 0.53 46.0 3.80e-01 100.0% 67.5%
1d8hA00 3.20.100.10 Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › mRNA triphosphatase Cet1-like 0.52 37.0 2.68e-01 75.3% 40.3%
1k1zA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 38.0 3.96e-01 100.0% 87.2%
5yprA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 42.0 4.35e-01 100.0% 98.8%
3u6xS00 2.60.40.3320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 40.0 3.85e-01 100.0% 74.3%
1q4tA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.51 35.0 2.95e-01 100.0% 44.4%
1ia9A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 44.0 3.83e-01 100.0% 91.7%
ECOD (39)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3264236 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.75 52.0 4.98e-01 100.0% 63.0%
3890749 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.72 52.0 5.21e-01 100.0% 74.4%
3247727 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.71 49.0 4.15e-01 100.0% 45.0%
3478983 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 56.0 5.32e-01 100.0% 74.3%
4146498 220.1.1.25 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › CARM1 0.68 55.0 5.27e-01 100.0% 76.0%
3231960 192.5.1.0 ↗ alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat 0.68 54.0 4.04e-01 100.0% 36.6%
3896415 220.1.1.7 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS 0.67 49.0 4.82e-01 100.0% 72.6%
1833801 220.1.1.25 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › CARM1 0.66 56.0 5.20e-01 100.0% 74.1%
3939687 220.1.1.2 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.65 56.0 5.42e-01 100.0% 82.0%
3869436 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 49.0 4.70e-01 100.0% 70.0%
3899275 220.1.1.2 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.65 55.0 4.76e-01 100.0% 60.0%
3939762 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 55.0 5.14e-01 100.0% 74.5%
3617706 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 55.0 5.30e-01 100.0% 85.0%
3882269 220.1.1.25 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › CARM1 0.62 53.0 5.03e-01 100.0% 78.1%
3518065 220.1.1.2 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.61 53.0 4.61e-01 100.0% 62.2%
3782999 219.1.1.115 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › AIM3_BBC1_C 0.61 47.0 4.06e-01 100.0% 51.7%
3260972 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 57.0 5.08e-01 100.0% 74.2%
3413910 220.1.1.2 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.61 50.0 4.42e-01 100.0% 60.0%
3884716 220.1.1.2 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.61 49.0 4.32e-01 100.0% 58.5%
4560070 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 56.0 4.77e-01 100.0% 72.1%
3553885 220.1.1.2 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.61 54.0 4.70e-01 100.0% 64.4%
3863963 220.1.1.2 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.60 54.0 4.82e-01 100.0% 69.6%
3570598 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.57 51.0 4.34e-01 100.0% 62.1%
3519329 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 51.0 4.38e-01 100.0% 72.1%
4943576 4.23.1.0 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like 0.56 44.0 3.94e-01 100.0% 60.0%
3648015 9.1.1.21 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Cyclin_D1_bind 0.56 50.0 4.07e-01 100.0% 77.6%
3470815 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.55 38.0 4.19e-01 100.0% 92.9%
3423859 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 44.0 4.39e-01 100.0% 87.8%
3716034 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.52 48.0 3.22e-01 100.0% 88.2%
3731080 5.1.3.23 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SGL 0.52 49.0 3.11e-01 100.0% 72.9%
3575714 5.1.4.329 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30693 0.51 48.0 3.03e-01 100.0% 89.4%
3613078 5.1.3.7 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL 0.51 48.0 3.20e-01 100.0% 94.6%
4941858 5.1.4.49 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PSII_BNR 0.51 46.0 3.03e-01 98.9% 90.3%
3226744 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 43.0 4.35e-01 100.0% 95.6%
3166905 5.1.4.74 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vps16_N 0.50 47.0 3.16e-01 100.0% 91.0%
3793604 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 44.0 3.83e-01 100.0% 65.5%
3628642 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.50 47.0 3.03e-01 100.0% 97.5%
3969495 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.50 47.0 3.30e-01 100.0% 96.9%
3592465 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.50 46.0 3.08e-01 100.0% 94.5%