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BML_coassembly_scaffold_108_prodigal-single.1__X__X__00120
Bact-VirBML_coassembly_scaffold_108_prodigal-single.1__X__X__00120
Identity
- Kingdom:
- phage
Quality
82.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-79
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5yvxA00 | 3.30.40.100 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.63 | 40.0 | 4.30e-01 | 87.3% | 76.7% |
| 5sviB00 | 3.30.40.100 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.58 | 38.0 | 4.29e-01 | 94.4% | 88.7% |
| 1mw9X02 | 1.10.460.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 | 0.55 | 41.0 | 3.15e-01 | 97.2% | 34.4% |
| 1wi5A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 34.0 | 3.43e-01 | 70.4% | 61.3% |
| 1xteA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.53 | 43.0 | 3.78e-01 | 94.4% | 92.2% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3260588 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.66 | 43.0 | 4.90e-01 | 74.6% | 94.0% |
| 3786259 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.61 | 34.0 | 3.15e-01 | 80.3% | 42.2% |
| 3610304 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.60 | 37.0 | 3.65e-01 | 83.1% | 58.7% |
| 2392229 | 376.1.3.6 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › zf-CW | 0.59 | 40.0 | 3.91e-01 | 74.6% | 63.3% |
| 3322252 | 4952.1.1.3 ↗ | alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › DUF1677 | 0.58 | 48.0 | 4.85e-01 | 91.5% | 100.0% |
| 3276125 | 109.4.1.75 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IFRD | 0.58 | 48.0 | 3.13e-01 | 98.6% | 21.9% |
| 3390051 | 4232.1.1.0 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 | 0.57 | 44.0 | 3.22e-01 | 87.3% | 32.7% |
| 5062565 | 177.1.1.1 ↗ | alpha bundles › Phospholipase C/P1 nuclease › Phospholipase C/P1 nuclease › Phospholipase C/P1 nuclease › Zn_dep_PLPC | 0.56 | 41.0 | 2.74e-01 | 78.9% | 61.7% |
| 3431630 | 103.5.1.8 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like › DUF1677 | 0.56 | 46.0 | 4.55e-01 | 90.1% | 100.0% |
| 5041606 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.56 | 40.0 | 4.16e-01 | 74.6% | 81.5% |
| 3396514 | 386.1.1.259 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF29169 | 0.52 | 30.0 | 3.61e-01 | 85.9% | 88.9% |
| 3623035 | 2004.5.1.3 ↗ | a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain › DENN | 0.52 | 37.0 | 2.61e-01 | 76.1% | 94.0% |
| 3658113 | 857.1.1.16 ↗ | a+b duplicates or obligate multimers › Cell division protein ZapA-like › Cell division protein ZapA-like › Cell division protein ZapA-like › DUF1677 | 0.50 | 39.0 | 4.00e-01 | 91.5% | 97.1% |