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BML_coassembly_scaffold_108_prodigal-single.1__X__X__00201

Bact-Vir

BML_coassembly_scaffold_108_prodigal-single.1__X__X__00201

Identity

Kingdom:
phage

Quality

92.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-125
PDB
Domain cluster: rep: term1_stool_scaffold_19_prodigal-single.1__X__X__00201__D382-454_511-549
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.71 32.0 4.65e-01 72.7% 98.0%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.68 30.0 4.33e-01 71.1% 94.2%
1igqB00 2.30.30.150 Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain 0.67 31.0 4.31e-01 74.4% 93.0%
6ijfC01 3.90.1720.80 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.66 35.0 3.95e-01 79.3% 65.6%
1khcA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 35.0 4.49e-01 75.2% 93.8%
2jngA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 36.0 4.41e-01 79.3% 85.7%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 29.0 4.18e-01 71.9% 100.0%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 35.0 4.16e-01 74.4% 80.2%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.62 29.0 4.13e-01 71.9% 100.0%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 33.0 4.08e-01 76.0% 91.7%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 33.0 4.06e-01 74.4% 92.9%
2e5kA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 32.0 4.12e-01 71.1% 100.0%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 32.0 3.79e-01 79.3% 82.3%
4fssB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 30.0 4.00e-01 71.1% 100.0%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 30.0 4.02e-01 71.1% 100.0%
1n27A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 37.0 4.06e-01 98.3% 82.3%
1k1zA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 31.0 3.75e-01 71.1% 87.2%
3pvlA05 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 33.0 3.98e-01 93.4% 98.7%
5f3yA05 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 33.0 3.94e-01 93.4% 100.0%
1vwxS01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.51 27.0 3.45e-01 75.2% 88.7%
1cv8A00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.51 35.0 3.14e-01 76.9% 49.7%
ECOD (34)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4625654 4.1.1.445 ↗ beta barrels › SH3 › SH3 › SH3 › Spore_GerQ 0.71 40.0 4.87e-01 77.7% 88.0%
3476179 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 38.0 4.26e-01 96.7% 69.5%
4083915 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.66 38.0 4.65e-01 82.6% 90.7%
547 4.1.1.49 ↗ beta barrels › SH3 › SH3 › SH3 › KorB_C 0.66 31.0 4.34e-01 72.7% 98.1%
4484974 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 41.0 4.80e-01 85.1% 89.4%
3170688 4.1.1.303 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.65 33.0 4.44e-01 74.4% 98.3%
4026957 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 33.0 4.27e-01 76.0% 95.0%
3281618 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.63 42.0 4.62e-01 81.0% 83.0%
3842631 4.1.1.243 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_Myosin-XVIIIa 0.63 32.0 4.06e-01 77.7% 84.3%
3941320 4.1.1.303 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.62 38.0 4.59e-01 95.9% 98.7%
3482646 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 37.0 3.15e-01 87.6% 37.0%
3479037 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 36.0 4.29e-01 86.0% 92.5%
3720772 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.58 34.0 4.28e-01 84.3% 100.0%
4012002 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 34.0 4.23e-01 76.9% 98.6%
4003123 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.58 31.0 4.02e-01 71.9% 95.4%
3275623 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.57 30.0 3.49e-01 71.1% 70.6%
3895155 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.57 33.0 3.90e-01 76.9% 85.0%
3570230 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.57 36.0 4.04e-01 86.0% 84.4%
3846212 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.57 31.0 3.72e-01 72.7% 80.0%
3917464 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 31.0 4.07e-01 78.5% 100.0%
3620934 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.57 31.0 3.76e-01 76.9% 81.2%
3477037 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.56 32.0 4.04e-01 76.0% 95.7%
3404158 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.56 39.0 4.05e-01 98.3% 75.7%
3970000 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 35.0 3.76e-01 76.9% 77.0%
3247188 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.54 31.0 3.77e-01 72.7% 89.3%
3784968 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.54 34.0 3.98e-01 73.6% 93.8%
3914462 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.54 34.0 3.82e-01 86.0% 83.3%
3401355 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.54 34.0 3.60e-01 79.3% 71.2%
3581719 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.54 34.0 3.47e-01 79.3% 64.3%
3518287 4.1.1.347 ↗ beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 0.54 36.0 3.75e-01 79.3% 73.0%
1824182 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.51 33.0 3.94e-01 93.4% 100.0%
3766287 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 33.0 3.56e-01 83.5% 78.0%
3221547 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 33.0 3.93e-01 91.7% 100.0%
3617677 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.50 32.0 3.88e-01 86.8% 98.8%