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BML_coassembly_scaffold_108_prodigal-single.1__X__X__00207
Bact-VirBML_coassembly_scaffold_108_prodigal-single.1__X__X__00207
Identity
- Kingdom:
- phage
Quality
82.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-75
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wwxB00 | 1.20.1260.70 | Mainly Alpha › Up-down Bundle › Ferritin › | 0.65 | 55.0 | 4.07e-01 | 100.0% | 52.5% |
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.64 | 49.0 | 4.12e-01 | 82.4% | 85.5% |
| 2v6eA01 | 1.10.287.3180 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 43.0 | 4.20e-01 | 75.0% | 94.7% |
| 6hj2A00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.57 | 41.0 | 2.83e-01 | 79.4% | 25.5% |
| 3q5dA02 | 1.20.58.420 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP | 0.54 | 42.0 | 3.73e-01 | 83.8% | 84.5% |
| 1q8dA00 | 1.10.220.110 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › GDNF binding domain | 0.53 | 44.0 | 4.01e-01 | 100.0% | 83.0% |
| 3he0B00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 43.0 | 3.32e-01 | 100.0% | 76.4% |
| 3hn2A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.51 | 38.0 | 3.12e-01 | 79.4% | 60.9% |
| 1t6sA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 42.0 | 3.91e-01 | 91.2% | 77.9% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3438263 | 109.4.1.1129 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_TRAPPC9-Trs120 | 0.70 | 55.0 | 3.87e-01 | 85.3% | 36.7% |
| 3320951 | 601.2.1.5 ↗ | alpha bundles › Four-helical up-and-down bundle › Cytochromes › Cytochromes › Ctr | 0.69 | 51.0 | 4.26e-01 | 79.4% | 64.2% |
| 3743232 | 109.4.1.66 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Hamartin | 0.66 | 56.0 | 3.24e-01 | 98.5% | 26.7% |
| 3995882 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 53.0 | 3.24e-01 | 100.0% | 16.2% |
| 3249096 | 3877.1.1.1 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC › 60KD_IMP | 0.61 | 42.0 | 2.95e-01 | 72.1% | 53.8% |
| 3607140 | 601.48.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › vWA2 C-terminal domain › vWA2 C-terminal domain | 0.61 | 42.0 | 4.49e-01 | 100.0% | 89.1% |
| 3774915 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.56 | 50.0 | 3.29e-01 | 97.1% | 44.0% |
| 4020278 | 1075.4.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold | 0.53 | 45.0 | 2.94e-01 | 97.1% | 78.8% |
| 3576750 | 3600.1.1.8 ↗ | alpha bundles › uncharacterized protein SYNW0670 › uncharacterized protein SYNW0670 › uncharacterized protein SYNW0670 › Mitofilin | 0.51 | 43.0 | 3.05e-01 | 97.1% | 79.6% |