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BML_coassembly_scaffold_13_prodigal-single.1__X__X__00001
Bact-VirBML_coassembly_scaffold_13_prodigal-single.1__X__X__00001
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-66_141-189
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01070.25 best | FMN_dh | 26.6 | 4.20e-06 | 84.4% | 24.6% |
| PF00478.32 | IMPDH | 74.5 | 1.20e-20 | 60.0% | 19.7% |
CATH (54)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2a7rD00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.98 | 88.0 | 6.06e-01 | 92.2% | 41.0% |
| 1eepA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.95 | 85.0 | 5.90e-01 | 92.2% | 39.5% |
| 1zfjA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.93 | 90.0 | 5.69e-01 | 100.0% | 33.2% |
| 2qr6A02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.93 | 80.0 | 5.46e-01 | 89.6% | 41.4% |
| 1nf7A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.92 | 88.0 | 5.63e-01 | 100.0% | 35.5% |
| 3r2gA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.91 | 83.0 | 5.71e-01 | 93.9% | 46.7% |
| 1mehA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.90 | 81.0 | 5.51e-01 | 93.9% | 44.4% |
| 1ypfA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.89 | 79.0 | 5.64e-01 | 93.0% | 41.0% |
| 3bw3A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.84 | 61.0 | 4.20e-01 | 74.8% | 51.4% |
| 7bsrA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.84 | 71.0 | 4.99e-01 | 88.7% | 93.5% |
| 1vcfB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.83 | 71.0 | 5.06e-01 | 88.7% | 55.0% |
| 1p0kA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.82 | 70.0 | 5.01e-01 | 89.6% | 42.2% |
| 1qcwA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.82 | 71.0 | 4.85e-01 | 90.4% | 87.7% |
| 2j6xH00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.82 | 72.0 | 4.95e-01 | 92.2% | 89.1% |
| 3sr7A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.82 | 71.0 | 5.20e-01 | 90.4% | 46.9% |
| 1tb3E00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.81 | 68.0 | 4.79e-01 | 87.8% | 91.7% |
| 6b8sA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.77 | 63.0 | 4.34e-01 | 85.2% | 30.7% |
| 1uumA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.75 | 61.0 | 4.24e-01 | 86.1% | 30.9% |
| 6e0bA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.74 | 61.0 | 4.17e-01 | 87.0% | 28.3% |
| 3o63A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.74 | 44.0 | 3.58e-01 | 79.1% | 32.2% |
| 2czdB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.73 | 50.0 | 4.04e-01 | 70.4% | 47.3% |
| 1jqxA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.73 | 60.0 | 4.51e-01 | 87.8% | 58.1% |
| 3ve9A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.71 | 50.0 | 4.06e-01 | 72.2% | 48.0% |
| 2ekcB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.70 | 49.0 | 3.75e-01 | 72.2% | 77.0% |
| 3tr2B00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.70 | 50.0 | 3.93e-01 | 73.0% | 47.1% |
| 4fb7A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.69 | 47.0 | 3.54e-01 | 82.6% | 29.7% |
| 1ep3A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.68 | 55.0 | 3.97e-01 | 86.1% | 36.3% |
| 5k9xA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.67 | 48.0 | 3.62e-01 | 73.9% | 78.2% |
| 3qz6A00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.67 | 51.0 | 3.88e-01 | 80.9% | 46.3% |
| 3ndoA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.62 | 48.0 | 3.79e-01 | 80.0% | 47.1% |
| 4n6fA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.62 | 51.0 | 3.96e-01 | 87.8% | 56.2% |
| 3e0vB01 | 3.40.1380.20 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain | 0.61 | 34.0 | 3.10e-01 | 72.2% | 37.9% |
| 4gj1A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.61 | 46.0 | 3.62e-01 | 78.3% | 92.1% |
| 1wv2A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.61 | 51.0 | 4.00e-01 | 87.8% | 58.7% |
| 1mxgA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.60 | 45.0 | 3.26e-01 | 80.0% | 65.0% |
| 6bmaA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.60 | 46.0 | 3.47e-01 | 80.0% | 39.4% |
| 3tdnA00 | 3.40.50.12600 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 45.0 | 4.50e-01 | 79.1% | 91.7% |
| 3eoeD01 | 3.40.1380.20 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain | 0.59 | 34.0 | 3.22e-01 | 73.9% | 45.3% |
| 1lt7B00 | 3.20.20.330 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Homocysteine-binding-like domain | 0.59 | 44.0 | 3.25e-01 | 80.0% | 37.5% |
| 2nqlA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.58 | 42.0 | 3.41e-01 | 76.5% | 44.5% |
| 1tqxA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 43.0 | 3.43e-01 | 77.4% | 81.0% |
| 4mm1C00 | 3.20.20.390 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › FMN-linked oxidoreductases | 0.58 | 45.0 | 3.49e-01 | 81.7% | 45.3% |
| 5c40B00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.57 | 43.0 | 3.18e-01 | 80.0% | 66.0% |
| 2basB01 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.57 | 43.0 | 3.46e-01 | 80.0% | 65.5% |
| 3sy8C02 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.56 | 43.0 | 3.34e-01 | 80.0% | 61.9% |
| 3tfxA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 44.0 | 3.46e-01 | 81.7% | 45.0% |
| 1bqgA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.56 | 43.0 | 3.28e-01 | 80.0% | 39.2% |
| 2og9A02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.55 | 42.0 | 3.29e-01 | 79.1% | 65.2% |
| 2wb4B01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 43.0 | 3.25e-01 | 83.5% | 90.2% |
| 1j6oA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.54 | 41.0 | 3.20e-01 | 80.0% | 56.9% |
| 2ps2A02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.53 | 39.0 | 3.10e-01 | 91.3% | 37.0% |
| 3abzA01 | 3.20.20.300 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase, family 3, N-terminal domain | 0.53 | 44.0 | 3.17e-01 | 91.3% | 64.5% |
| 2rbcA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.52 | 39.0 | 2.92e-01 | 80.0% | 65.4% |
| 3grzB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 38.0 | 3.26e-01 | 80.9% | 81.3% |
ECOD (84)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3627326 | 2002.1.1.23 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IMPDH | 0.98 | 96.0 | 6.40e-01 | 100.0% | 44.8% |
| 4414431 | 2002.1.1.23 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IMPDH | 0.98 | 93.0 | 6.40e-01 | 97.4% | 43.1% |
| 3555073 | 2002.1.1.23 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IMPDH | 0.97 | 94.0 | 6.36e-01 | 100.0% | 46.6% |
| 4173173 | 2002.1.1.23 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IMPDH | 0.96 | 94.0 | 6.32e-01 | 100.0% | 46.0% |
| 2034325 | 2002.1.1.280 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IMPDH, NMO | 0.95 | 91.0 | 6.20e-01 | 100.0% | 44.8% |
| None | — | 0.94 | 91.0 | 6.08e-01 | 100.0% | 46.5% | |
| None | — | 0.94 | 91.0 | 6.06e-01 | 100.0% | 47.5% | |
| 4169100 | 2002.1.1.23 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IMPDH | 0.94 | 91.0 | 6.03e-01 | 100.0% | 46.5% |
| None | — | 0.94 | 90.0 | 6.04e-01 | 100.0% | 47.3% | |
| 4967106 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.93 | 90.0 | 6.02e-01 | 100.0% | 47.9% |
| None | — | 0.93 | 90.0 | 5.97e-01 | 100.0% | 46.6% | |
| 5049660 | 2002.1.1.23 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IMPDH | 0.93 | 86.0 | 5.77e-01 | 95.7% | 45.8% |
| None | — | 0.92 | 89.0 | 6.17e-01 | 100.0% | 45.0% | |
| None | — | 0.92 | 88.0 | 5.93e-01 | 100.0% | 45.9% | |
| 4586408 | 2002.1.1.23 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IMPDH | 0.92 | 88.0 | 5.78e-01 | 99.1% | 43.0% |
| 3595276 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.92 | 88.0 | 5.81e-01 | 100.0% | 44.8% |
| None | — | 0.92 | 88.0 | 5.69e-01 | 100.0% | 44.5% | |
| 4468948 | 2002.1.1.263 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IMPDH, FMN_dh | 0.91 | 87.0 | 5.65e-01 | 100.0% | 44.8% |
| 1117705 | 2002.1.1.23 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IMPDH | 0.91 | 80.0 | 5.31e-01 | 92.2% | 42.5% |
| 4157113 | 2002.1.1.280 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IMPDH, NMO | 0.90 | 82.0 | 5.65e-01 | 93.9% | 44.9% |
| 5057903 | 2002.1.1.23 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IMPDH | 0.90 | 86.0 | 5.93e-01 | 100.0% | 43.3% |
| 4226134 | 2002.1.1.263 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IMPDH, FMN_dh | 0.88 | 83.0 | 5.72e-01 | 98.3% | 46.0% |
| 3700383 | 2002.1.1.48 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › FMN_dh | 0.87 | 73.0 | 6.19e-01 | 87.8% | 68.0% |
| 3589689 | 2002.1.1.263 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IMPDH, FMN_dh | 0.86 | 83.0 | 5.73e-01 | 100.0% | 46.2% |
| 4151696 | 2002.1.1.23 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IMPDH | 0.86 | 82.0 | 5.69e-01 | 100.0% | 46.0% |
| 3957208 | 2002.1.1.48 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › FMN_dh | 0.86 | 69.0 | 5.41e-01 | 83.5% | 49.1% |
| 4053935 | 2002.1.1.48 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › FMN_dh | 0.85 | 72.0 | 4.91e-01 | 87.8% | 35.5% |
| None | — | 0.85 | 74.0 | 4.88e-01 | 90.4% | 58.8% | |
| 4949135 | 2002.1.1.70 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glu_synthase | 0.85 | 74.0 | 5.39e-01 | 91.3% | 65.1% |
| 3592644 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.85 | 72.0 | 4.98e-01 | 89.6% | 35.1% |
| 3612154 | 2002.1.1.48 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › FMN_dh | 0.84 | 73.0 | 5.00e-01 | 90.4% | 34.9% |
| 3495697 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.84 | 73.0 | 4.77e-01 | 91.3% | 55.8% |
| None | — | 0.84 | 72.0 | 5.32e-01 | 90.4% | 54.4% | |
| 3980967 | 2002.1.1.48 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › FMN_dh | 0.83 | 70.0 | 4.77e-01 | 89.6% | 89.1% |
| 3781568 | 2002.1.1.48 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › FMN_dh | 0.82 | 70.0 | 4.69e-01 | 90.4% | 83.2% |
| 3730531 | 2002.1.1.48 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › FMN_dh | 0.80 | 69.0 | 4.56e-01 | 91.3% | 86.5% |
| 5007484 | 2002.1.1.48 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › FMN_dh | 0.80 | 67.0 | 4.64e-01 | 87.0% | 84.2% |
| 4986533 | 2002.1.1.9 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase | 0.79 | 50.0 | 4.64e-01 | 80.0% | 51.0% |
| 4991739 | 2002.1.1.70 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glu_synthase | 0.79 | 68.0 | 5.04e-01 | 90.4% | 48.7% |
| 4419832 | 2002.1.1.97 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TMP-TENI | 0.78 | 53.0 | 4.19e-01 | 86.1% | 35.9% |
| 4611975 | 2002.1.1.54 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHO_dh | 0.76 | 64.0 | 4.38e-01 | 87.0% | 30.7% |
| 3449932 | 2002.1.1.54 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHO_dh | 0.76 | 64.0 | 4.18e-01 | 87.0% | 26.0% |
| 3993577 | 2002.1.1.54 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHO_dh | 0.76 | 63.0 | 4.23e-01 | 87.0% | 27.8% |
| 4980051 | 2002.1.1.9 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase | 0.76 | 50.0 | 3.96e-01 | 76.5% | 35.0% |
| 5026527 | 2002.1.1.54 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHO_dh | 0.76 | 64.0 | 4.56e-01 | 87.8% | 37.5% |
| 4529198 | 2002.1.1.54 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHO_dh | 0.75 | 62.0 | 4.27e-01 | 86.1% | 30.0% |
| 3449031 | 2002.1.1.54 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHO_dh | 0.75 | 63.0 | 4.25e-01 | 87.8% | 31.9% |
| 5040829 | 2002.1.1.15 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA | 0.74 | 52.0 | 3.88e-01 | 72.2% | 33.0% |
| 4980171 | 2002.1.1.54 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHO_dh | 0.73 | 61.0 | 4.29e-01 | 87.8% | 37.0% |
| 5023677 | 2002.1.1.54 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHO_dh | 0.73 | 61.0 | 4.35e-01 | 87.8% | 35.6% |
| 5063001 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.73 | 60.0 | 4.37e-01 | 85.2% | 46.4% |
| 5060345 | 2002.1.1.54 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHO_dh | 0.73 | 61.0 | 4.31e-01 | 87.8% | 36.0% |
| 3979295 | 2002.1.1.54 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHO_dh | 0.73 | 61.0 | 4.30e-01 | 87.8% | 36.9% |
| 5079659 | 2002.1.1.54 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHO_dh | 0.73 | 60.0 | 4.27e-01 | 87.0% | 35.9% |
| 4971725 | 2002.1.1.54 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHO_dh | 0.71 | 59.0 | 4.18e-01 | 87.8% | 34.8% |
| 4436368 | 2002.1.1.54 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHO_dh | 0.71 | 59.0 | 4.27e-01 | 87.0% | 37.6% |
| None | — | 0.70 | 57.0 | 4.12e-01 | 86.1% | 35.5% | |
| 4959284 | 2002.1.1.54 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHO_dh | 0.70 | 59.0 | 4.17e-01 | 87.8% | 34.9% |
| None | — | 0.70 | 57.0 | 4.14e-01 | 87.0% | 36.1% | |
| None | — | 0.70 | 57.0 | 4.13e-01 | 87.0% | 36.1% | |
| 3166313 | 2002.1.1.97 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TMP-TENI | 0.69 | 48.0 | 3.77e-01 | 80.0% | 36.0% |
| 4589032 | 2002.1.1.15 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA | 0.68 | 52.0 | 3.80e-01 | 79.1% | 34.4% |
| 3355879 | 2002.1.1.49 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldolase | 0.67 | 50.0 | 4.01e-01 | 79.1% | 41.9% |
| 5035280 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.67 | 49.0 | 3.93e-01 | 80.0% | 39.9% |
| 4933263 | 2002.1.1.78 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PcrB | 0.66 | 53.0 | 3.99e-01 | 84.3% | 47.1% |
| 3628928 | 2002.1.1.37 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim | 0.65 | 44.0 | 3.45e-01 | 80.0% | 33.9% |
| 4173776 | 2002.1.1.9 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase | 0.65 | 53.0 | 4.24e-01 | 85.2% | 49.8% |
| 1126487 | 2002.1.1.37 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim | 0.65 | 43.0 | 3.46e-01 | 80.9% | 34.5% |
| 4059724 | 2002.1.1.9 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase | 0.65 | 53.0 | 4.20e-01 | 86.1% | 47.7% |
| 5048645 | 2002.1.1.73 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT | 0.64 | 55.0 | 3.91e-01 | 93.0% | 70.3% |
| None | — | 0.64 | 50.0 | 3.74e-01 | 81.7% | 99.3% | |
| 3714428 | 2002.1.1.37 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim | 0.63 | 42.0 | 4.00e-01 | 79.1% | 57.0% |
| 3961941 | 2002.1.1.111 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI | 0.63 | 49.0 | 3.80e-01 | 81.7% | 46.8% |
| 4513952 | 2002.1.1.9 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase | 0.62 | 50.0 | 3.98e-01 | 84.3% | 47.4% |
| 4572708 | 2002.1.1.32 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Oxidored_FMN | 0.62 | 47.0 | 3.26e-01 | 80.9% | 54.2% |
| 4483471 | 2002.1.1.43 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › His_biosynth | 0.61 | 47.0 | 3.55e-01 | 80.0% | 87.2% |
| 1291618 | 2002.1.1.138 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ThiG | 0.61 | 51.0 | 3.97e-01 | 89.6% | 56.1% |
| 4091965 | 2002.1.1.43 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › His_biosynth | 0.60 | 48.0 | 3.67e-01 | 85.2% | 91.8% |
| 3513877 | 2002.1.1.37 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim | 0.59 | 45.0 | 3.60e-01 | 80.9% | 79.1% |
| 4970339 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.59 | 45.0 | 3.25e-01 | 80.0% | 65.3% |
| 4941332 | 2002.1.1.37 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim | 0.57 | 45.0 | 3.66e-01 | 84.3% | 83.3% |
| 3594853 | 2002.1.1.37 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim | 0.56 | 45.0 | 3.44e-01 | 85.2% | 71.5% |
| 3732245 | 2002.1.1.37 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim | 0.56 | 44.0 | 3.38e-01 | 83.5% | 82.0% |
| 3691958 | 2003.1.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ADH_zinc_N | 0.51 | 36.0 | 3.15e-01 | 73.9% | 91.4% |
D2
medium
residues 67-140
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ntyA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.76 | 34.0 | 2.79e-01 | 98.6% | 24.2% |
| 3gw6A03 | 3.30.2460.10 | Alpha Beta › 2-Layer Sandwich › Endo-n-acetylneuraminidase fold › Endo-n-acetylneuraminidase domain | 0.66 | 41.0 | 4.48e-01 | 75.7% | 78.9% |
| 3akoD00 | 6.20.160.10 | Special › Other non-globular › HSP40/DNAj peptide-binding domain › | 0.59 | 30.0 | 3.06e-01 | 71.6% | 44.7% |
| 2k4nA00 | 3.30.720.70 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.59 | 40.0 | 3.49e-01 | 100.0% | 45.9% |
| 3gw6D02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 40.0 | 3.24e-01 | 75.7% | 71.4% |
| 7r5mA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.55 | 34.0 | 2.51e-01 | 100.0% | 20.6% |
| 1dwnA00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.53 | 33.0 | 2.90e-01 | 94.6% | 36.2% |
| 3w1eA03 | 2.40.10.410 | Mainly Beta › Beta Barrel › Thrombin, subunit H › FlgT, C-terminal domain | 0.51 | 32.0 | 3.06e-01 | 100.0% | 51.7% |
| 4rt0A00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.51 | 27.0 | 2.41e-01 | 97.3% | 30.3% |
| 1se8A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 31.0 | 2.82e-01 | 94.6% | 39.6% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4173173 | 2002.1.1.23 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IMPDH | 0.94 | 57.0 | 3.54e-01 | 100.0% | 13.1% |
| 3555073 | 2002.1.1.23 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IMPDH | 0.93 | 57.0 | 3.51e-01 | 100.0% | 13.4% |
| 4954828 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.63 | 28.0 | 3.36e-01 | 95.9% | 58.0% |
| 4943742 | 2484.1.1.232 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › EutA | 0.61 | 34.0 | 2.87e-01 | 94.6% | 32.5% |
| 4474382 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.56 | 38.0 | 3.25e-01 | 70.3% | 52.8% |
| 5050786 | 4027.1.1.0 ↗ | beta barrels › all-beta domain in DNA topoisomerase IV alpha subunit › all-beta domain in DNA topoisomerase IV alpha subunit › all-beta domain in DNA topoisomerase IV alpha subunit | 0.56 | 22.0 | 2.78e-01 | 93.2% | 48.9% |
| 4028589 | 59.1.1.7 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › Tau95_N | 0.54 | 32.0 | 2.94e-01 | 100.0% | 40.0% |
| 4022137 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.54 | 32.0 | 2.31e-01 | 98.6% | 20.5% |
| 5037829 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.52 | 33.0 | 3.04e-01 | 93.2% | 48.0% |
| 1943 | 11.13.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Leukocidin-like › Leukocidin-like › Leukocidin | 0.52 | 34.0 | 2.33e-01 | 89.2% | 16.4% |
| 4117439 | 512.1.1.2 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd | 0.52 | 33.0 | 2.95e-01 | 95.9% | 44.8% |
| 3940319 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.51 | 44.0 | 2.90e-01 | 100.0% | 31.3% |
| 3503289 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 36.0 | 3.27e-01 | 94.6% | 55.0% |
| 4945299 | 512.1.1.5 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_3rd | 0.50 | 32.0 | 2.81e-01 | 94.6% | 40.0% |