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BML_coassembly_scaffold_13_prodigal-single.1__X__X__00034
Bact-VirBML_coassembly_scaffold_13_prodigal-single.1__X__X__00034
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 437-557
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00141.29 best | peroxidase | 56.8 | 4.20e-15 | 96.7% | 45.1% |
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u2kA01 | 1.10.520.10 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › | 0.97 | 95.0 | 8.30e-01 | 100.0% | 78.0% |
| 1itkA01 | 1.10.520.10 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › | 0.90 | 81.0 | 7.63e-01 | 93.4% | 88.7% |
| 5al9A01 | 1.10.520.10 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › | 0.87 | 83.0 | 7.74e-01 | 100.0% | 86.2% |
| 1bekA01 | 1.10.520.10 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › | 0.87 | 83.0 | 7.24e-01 | 100.0% | 75.3% |
| 2vcnA01 | 1.10.520.10 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › | 0.86 | 80.0 | 7.55e-01 | 100.0% | 83.1% |
| 3rrwB01 | 1.10.520.10 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › | 0.84 | 79.0 | 6.76e-01 | 100.0% | 84.1% |
| 1c8iA01 | 1.10.520.10 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › | 0.82 | 77.0 | 6.49e-01 | 100.0% | 67.9% |
| 1mn2A01 | 1.10.520.10 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › | 0.81 | 76.0 | 6.90e-01 | 100.0% | 80.5% |
| 2dofA00 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.73 | 37.0 | 4.41e-01 | 78.5% | 70.6% |
| 3tl4X02 | 1.10.10.2420 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.63 | 34.0 | 4.24e-01 | 76.9% | 87.5% |
| 4jqfA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 34.0 | 4.12e-01 | 76.0% | 94.5% |
| 4malA00 | 1.20.58.2200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 25.0 | 3.32e-01 | 73.6% | 86.4% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4640808 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.96 | 93.0 | 5.48e-01 | 100.0% | 17.2% |
| 4098787 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.96 | 93.0 | 5.51e-01 | 100.0% | 18.9% |
| 4337170 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.96 | 93.0 | 5.50e-01 | 100.0% | 18.7% |
| 4562142 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.96 | 93.0 | 6.34e-01 | 100.0% | 37.7% |
| 4595955 | 136.1.1.0 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases | 0.88 | 84.0 | 5.59e-01 | 100.0% | 39.3% |
| 1489699 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.88 | 84.0 | 5.56e-01 | 100.0% | 39.2% |
| 4568953 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.88 | 84.0 | 5.64e-01 | 100.0% | 40.8% |
| 4234122 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.88 | 84.0 | 5.49e-01 | 100.0% | 43.2% |
| 4225198 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.88 | 84.0 | 6.01e-01 | 100.0% | 41.3% |
| 3306343 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.88 | 82.0 | 6.22e-01 | 100.0% | 47.2% |
| 2880713 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.87 | 82.0 | 6.11e-01 | 100.0% | 45.6% |
| 3807415 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.85 | 80.0 | 6.17e-01 | 100.0% | 49.8% |
| 3335526 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.84 | 80.0 | 6.03e-01 | 100.0% | 58.8% |
| 4586406 | 136.1.1.2 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase,Peroxidase_ext | 0.82 | 78.0 | 5.44e-01 | 100.0% | 38.5% |
| 4051161 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.77 | 72.0 | 5.29e-01 | 100.0% | 42.7% |
| 3320061 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.76 | 64.0 | 5.26e-01 | 88.4% | 53.9% |
| 5035908 | 3896.1.2.0 ↗ | alpha duplicates or obligate multimers › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-archaeol synthase | 0.52 | 37.0 | 3.31e-01 | 72.7% | 67.6% |
| 5001382 | 1075.1.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain | 0.52 | 37.0 | 2.93e-01 | 73.6% | 75.4% |
| 4415121 | 197.1.1.3 ↗ | alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › ACBP | 0.51 | 34.0 | 3.45e-01 | 87.6% | 67.5% |
D2
high
residues 564-688
Domain cluster:
rep: IMGVR_UViG_3300037036_000142-3300037036-Ga0395887_012221_2_2029__D564-675
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00141.29 best | peroxidase | 31.1 | 3.00e-07 | 88.0% | 47.7% |
D3
medium
residues 36-209_260-284_387-421
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00141.29 best | peroxidase | 84.9 | 1.00e-23 | 73.9% | 46.0% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1itkA01 | 1.10.520.10 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › | 0.99 | 60.0 | 7.91e-01 | 89.7% | 100.0% |
| 5al9A01 | 1.10.520.10 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › | 0.90 | 55.0 | 7.11e-01 | 92.7% | 99.3% |
| 2vcnA01 | 1.10.520.10 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › | 0.89 | 52.0 | 6.75e-01 | 90.2% | 96.5% |
| 1bekA01 | 1.10.520.10 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › | 0.87 | 58.0 | 6.84e-01 | 94.4% | 92.4% |
| 1u2kA01 | 1.10.520.10 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › | 0.85 | 58.0 | 7.03e-01 | 93.6% | 98.8% |
| 1c8iA01 | 1.10.520.10 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › | 0.72 | 53.0 | 5.87e-01 | 92.3% | 91.2% |
| 3rrwB01 | 1.10.520.10 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › | 0.71 | 53.0 | 6.03e-01 | 92.3% | 98.4% |
| 4ywkA01 | 3.30.1640.10 | Alpha Beta › 2-Layer Sandwich › mini-chromosome maintenance (MCM) complex, chain A, domain 1 › mini-chromosome maintenance (MCM) complex, chain A, domain 1 | 0.58 | 25.0 | 3.69e-01 | 84.6% | 92.8% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4595955 | 136.1.1.0 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases | 0.99 | 96.0 | 7.63e-01 | 98.7% | 93.9% |
| 4568953 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.99 | 95.0 | 7.67e-01 | 97.4% | 97.4% |
| 4337170 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.98 | 96.0 | 6.41e-01 | 99.1% | 53.5% |
| 4234122 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.98 | 97.0 | 7.50e-01 | 100.0% | 94.8% |
| 4640808 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.98 | 97.0 | 6.41e-01 | 100.0% | 54.7% |
| 1489699 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.98 | 96.0 | 7.58e-01 | 99.6% | 93.8% |
| 4098787 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.97 | 96.0 | 6.39e-01 | 100.0% | 53.3% |
| 4225198 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.71 | 69.0 | 6.17e-01 | 99.6% | 96.7% |
| 3667173 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.70 | 64.0 | 5.65e-01 | 93.6% | 98.4% |
| 2880713 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.70 | 64.0 | 5.98e-01 | 94.0% | 98.9% |
| 3333613 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.69 | 65.0 | 6.03e-01 | 97.0% | 100.0% |
| 3306343 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.69 | 61.0 | 5.94e-01 | 91.0% | 97.6% |
| 3727126 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.67 | 60.0 | 5.51e-01 | 93.2% | 96.2% |
| 4562142 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.67 | 62.0 | 5.32e-01 | 97.0% | 88.3% |
| 3807415 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.65 | 57.0 | 5.73e-01 | 91.5% | 100.0% |
| 3335526 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.63 | 56.0 | 5.44e-01 | 92.3% | 95.8% |
| 3684495 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.59 | 48.0 | 4.40e-01 | 82.9% | 89.7% |
| 3320061 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.57 | 42.0 | 4.48e-01 | 74.4% | 98.5% |
D4
medium
residues 210-259_285-386
Domain cluster:
rep: IMGVR_UViG_3300037036_000142-3300037036-Ga0395887_012221_2_2029__D564-675
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00141.29 best | peroxidase | 32.4 | 1.20e-07 | 96.0% | 50.2% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ub2A02 | 1.10.420.10 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 2 › Peroxidase, domain 2 | 0.99 | 97.0 | 8.45e-01 | 100.0% | 85.6% |
| 3uw8A02 | 1.10.420.10 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 2 › Peroxidase, domain 2 | 0.94 | 73.0 | 7.84e-01 | 86.2% | 90.3% |
| 1a2fA02 | 1.10.420.10 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 2 › Peroxidase, domain 2 | 0.92 | 64.0 | 7.27e-01 | 96.1% | 89.3% |
| 1lycA02 | 1.10.420.10 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 2 › Peroxidase, domain 2 | 0.81 | 57.0 | 5.59e-01 | 95.4% | 67.5% |
| 1iynA02 | 1.10.420.10 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 2 › Peroxidase, domain 2 | 0.77 | 55.0 | 6.17e-01 | 95.4% | 89.5% |
| 4cznA02 | 1.10.420.10 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 2 › Peroxidase, domain 2 | 0.76 | 59.0 | 5.61e-01 | 95.4% | 69.3% |
| 1u2kA02 | 1.10.420.10 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 2 › Peroxidase, domain 2 | 0.71 | 56.0 | 6.13e-01 | 100.0% | 97.7% |
| 4uscA02 | 1.10.420.10 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 2 › Peroxidase, domain 2 | 0.60 | 48.0 | 5.00e-01 | 95.4% | 88.2% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4595955 | 136.1.1.0 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases | 0.99 | 97.0 | 6.71e-01 | 100.0% | 43.2% |
| 1489699 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.99 | 97.0 | 6.68e-01 | 100.0% | 42.5% |
| 4568953 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.97 | 96.0 | 6.71e-01 | 100.0% | 45.4% |
| 4234122 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.97 | 95.0 | 6.48e-01 | 100.0% | 40.2% |
| 4337170 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.97 | 95.0 | 5.81e-01 | 100.0% | 23.9% |
| 4640808 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.97 | 95.0 | 5.78e-01 | 100.0% | 23.3% |
| 4098787 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.96 | 94.0 | 5.77e-01 | 100.0% | 23.9% |
| 2880713 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.69 | 66.0 | 5.25e-01 | 99.3% | 63.5% |
| 3727126 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.56 | 53.0 | 4.18e-01 | 99.3% | 59.7% |
| 3330466 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.53 | 50.0 | 4.27e-01 | 99.3% | 87.8% |